<![CDATA[BOL: Related items]]> https://bioinformaticsonline.com/related/27080?offset=1250 https://bioinformaticsonline.com/bookmarks/view/36239/scilifelab-tutorial-for-bioinformatics-analysis Tue, 17 Apr 2018 04:33:00 -0500 https://bioinformaticsonline.com/bookmarks/view/36239/scilifelab-tutorial-for-bioinformatics-analysis <![CDATA[SciLifeLab tutorial for bioinformatics analysis !]]> SciLifeLab is a national center for molecular biosciences with focus on health and environmental research.

Courses

Old courses (2012-2014)

Metagenomics Workshop

2015 November - Uppsala
2016 November - Uppsala
2017 November - Uppsala

Introduction to Bioinformatics Using NGS Data

2015 February - Uppsala 
2015 May - Gothenburg
2015 September - Uppsala
2015 November - Lund
2016 January - Uppsala
2016 April - Linköping
2016 September - Uppsala
2016 November - Umeå
2017 January - Uppsala
2017 May - Gothenburg
2017 September - Lund
2017 November - Uppsala
2018 February - Uppsala

Introduction to Genome Annotation

2015 April - Uppsala
2016 April - Uppsala
2017 April - Uppsala
2018 May - Uppsala

De Novo Genome Assembly

2016 November - Uppsala
2017 November - Uppsala

RNA-seq course

2015 October - Uppsala
2016 April - Uppsala
2016 October - Uppsala
2017 March - Uppsala
2017 November - Uppsala
RNAseq tutorials

R Programming Foundations for Life Scientists

2016 November - Uppsala
2017 Mars - Uppsala

Single cell RNA sequencing analysis

2017 October - Uppsala

Address of the bookmark: https://scilifelab.github.io/courses/

]]> Jit https://bioinformaticsonline.com/pages/view/1514/list-of-pharmacogenomics-companies-worldwide Fri, 09 Aug 2013 13:24:47 -0500 https://bioinformaticsonline.com/pages/view/1514/list-of-pharmacogenomics-companies-worldwide <![CDATA[List of pharmacogenomics companies worldwide]]>

Pharmacogenomics are the most promising area of research. Here is the list of some Pharmacogenomics companies worldwide. Feel free to add more pharmacogenomics companies if not mentioned in here.

Great Pharmacogenomics companies
www.aruplab.com
www.clarientinc.com
www.cns-hts.com
www.dnanow.com
www.dnavision.be
www.dnavision.com
www.dxsdiagnostics.com
www.entrogen.com
www.exiqon.com
www.gene.com
www.genomichealth.com
www.genoptix.com
www.genpathdiagnostics.com
www.gentris.com
www.immunicon.com
www.ingenuity.com
www.lab21.com
www.labcorp.com
www.lion-ag.de
www.lynxgen.com
www.mayoclinic.com
www.mesoscale.com
www.microcide.com
www.mitokor.com
www.monarchlifesciences.com
www.mplnet.com
www.orchidbio.com
www.pebio.com
www.phenomenome.com
www.phenopath.com
www.ppgx.com
www.prometheuslabs.com
www.protogene.com
www.questdiagnostics.com
www.rigelinc.com
www.rii.com
www.saladax.com
www.tmdlab.com
www.transgenomic.com
www.twt.com
www.uslabs.net
www.variagenics.com

Great Equipment Companies for Genomics
www.affymetrix.com
www.illumina.com
www.iontorrent.com
www.sequenom.com
www.appliedbiosystems.com
www.454.com
www.appliedbiosystems.com

Genomics in India
www.ganitlabs.in
www.sandor.co.in
www.igib.res.in
www.genotypic.co.in
www.ocimumbio.com
www.abcgenomics.com
www.xcelrisgenomics.com
www.ayugen.com
www.geneombiotech.com

Large Global Whole Genome Companies
www.decode.com
www.23andme.com
www.navigenics.com
www.pathway.com

Global companies offering genomics services
www.asuragen.com
www.baseclear.com
www.agtcenter.com
www.ambrygen.com
www.arosab.com
www.agrf.org.au
www.beckmangenomics.com
www.genomics.cn
www.bsf.a-star.edu.sg
www.cbm.fvg.it
www.cincinnatichildrens.org
www.cofactorgenomics.com
www.covance.com
www.dnalandmarks.ca
www.dnavision.com
www.expressionanalysis.com
www.fasteris.com
www.gatc-biotech.com
www.genesdiffusion.com
www.geneseek.com
www.geneticvisions.com
www.geneworks.com.au
www.genizon.com
www.genoskan.dk/uk
www.gpbio.jp
www.igatechnology.com
www.igenixinc.com
www.auxologico.it
www.lifeandbrain.com
www.macrogen.co.kr/eng
www.gqinnovationcenter.com
www.mftservices.de
www.ncgr.org
www.ramaciotti.unsw.edu.au
www.rikengenesis.jp
www.SABiosciences.com
www.sequensysbio.com
www.servicexs.com
www.snp-genetics.com
www.takara-bio.com
www.gen-probe.com
www.traitgenetics.com

]]> Jitendra Narayan https://bioinformaticsonline.com/news/view/1886/interpretomics Sun, 11 Aug 2013 10:24:33 -0500 https://bioinformaticsonline.com/news/view/1886/interpretomics <![CDATA[InterpretOmics]]> InterpretOmics, a big data analytics startup that focuses on life sciences, has received angel funding of around Rs 10 crore from a group of investors including Singapore's information technology and shipping company, Amarante.

http://www.interpretomics.co/

]]> Jitendra Narayan https://bioinformaticsonline.com/bookmarks/view/37636/department-of-genetics-genomics-and-bioinformatics-national-biotechnology-development-agency-nigeria Wed, 05 Sep 2018 10:48:25 -0500 https://bioinformaticsonline.com/bookmarks/view/37636/department-of-genetics-genomics-and-bioinformatics-national-biotechnology-development-agency-nigeria <![CDATA[DEPARTMENT OF GENETICS, GENOMICS AND BIOINFORMATICS, National Biotechnology Development Agency, Nigeria]]> The Genetics, Genomics & Bioinformatics Department (GBBD) at NABDA is unique, encompassing all facets of modern genetics and bioinformatics research. Trans-disciplinary research being conducted in our laboratories would lead to cures for human diseases; improvements to crop and livestock quality and yield; creation of new technologies with applications to medicine; agriculture; environment; and industry.

Our capacity building activities covers both general and specialized topics in translational genetics, and is designed to better acquaint scientists and clinicians with the tools and technologies of genetics and genomics.

OUR RESEARCH ACTIVITIES INCLUDE:

  • Biomedical Genetics: investigating genetic and environmental factors contributing to phenotypes with relevance to human health and disease.
  • Computation and Bioinformatics: develop new approaches for the management, analysis, and modelling of large, complex data sets.
  • Population and Quantitative Genetics: study of how genetic processes evolve to generate genetic variation in populations of organisms, and the effects on the patterning of variation within and between populations and specie, and
  • Genetic Engineering and Biotechnology: focuses on the research and innovation for industrial enzymes, biologics and biosimilars production.

https://www.h3abionet.org/nabda

Address of the bookmark: http://www.nabda.gov.ng/departments/genetics-genomics-and-bioinformatics

]]> BioStar https://bioinformaticsonline.com/opportunity/view/38590/senior-bioinformatics-scientist-strand-life-sciences-bangalore-india Wed, 02 Jan 2019 09:23:49 -0600 <![CDATA[Senior Bioinformatics Scientist @ Strand Life Sciences -- Bangalore, India]]> RESPONSIBILITIES
The candidate is expected to work on a variety of projects related to analysis of data from NGS, Mass Spectrometry, Flow Cytometry and other related modalities. The position expects hands-on work and a strong eye for detail. The candidate will be able to contribute to impactful work spanning patient care, clinical research, and new assay and method development.
REQUIREMENTS
A PhD in a quantitative field (statistics, math, bioinformatics, computer science, physics or similar) and work experience or post-doc experience handling high throughout genomics data.
PREFERENCES
Experience in working in inter-disciplinary groups and ability to author research publications are additional desired qualities.
LOCALE
The position is in Bangalore and reports to the Chief Scientific Officer.
HOW TO APPLY
Write to ramesh[at]strandls.com.

]]> https://bioinformaticsonline.com/file/view/2534/bioinformatician-needs-ten-heads Sat, 17 Aug 2013 10:30:45 -0500 https://bioinformaticsonline.com/file/view/2534/bioinformatician-needs-ten-heads <![CDATA[Bioinformatician needs ten heads !!!]]> Bioinformatics demands more and ... lots more knowledge. In this case Ravan, a mythological character from the Ramayan, can only be a real bioinformatician. :) :P

]]> Jitendra Narayan https://bioinformaticsonline.com/bookmarks/view/2253/best-practices-in-bioinformatics-training-for-life-scientists Tue, 13 Aug 2013 15:47:34 -0500 https://bioinformaticsonline.com/bookmarks/view/2253/best-practices-in-bioinformatics-training-for-life-scientists <![CDATA[Best practices in bioinformatics training for life scientists]]> Among life scientists, from clinicians to environmental researchers, a common theme is the need not just to use, and gain familiarity with, bioinformatics tools and resources but also to understand their underlying fundamental theoretical and practical concepts.

Find the detail paper at http://bib.oxfordjournals.org/content/early/2013/06/25/bib.bbt043.full

Address of the bookmark: http://bib.oxfordjournals.org/content/early/2013/06/25/bib.bbt043.full

]]> Jitendra Narayan https://bioinformaticsonline.com/bookmarks/view/40489/machine-learning-training-and-courses-in-bioinformatics Tue, 31 Dec 2019 19:33:07 -0600 https://bioinformaticsonline.com/bookmarks/view/40489/machine-learning-training-and-courses-in-bioinformatics <![CDATA[Machine learning training and courses in bioinformatics !]]> Machine learning techniques have been successful in analyzing biological data because of their capabilities in handling randomness and uncertainty of data noise and in generalization. In this class, we will learn basics about probabilistic models and machine learning techniques. We will focus on probabilistic models (Markov models, Hidden Markov models, and Bayesian networks) for biological sequence analysis and systems biology. Other machine learning techniques, such as Naive bayes, neural networks and SVMs will only be covered briefly.

More at http://homes.sice.indiana.edu/yye/lab/teaching/spring2017-I529/

More tutorial at 

http://calla.rnet.missouri.edu/cheng_courses/mlbioinfo/mlbioinfo.htm

http://www.raetschlab.org/lectures/MLBioinformatics

http://www.raetschlab.org/lectures/bertinoro08

Book at 

https://personal.utdallas.edu/~pradiptaray/teaching/7_deep_learning_bioinfo.pdf

Address of the bookmark: http://homes.sice.indiana.edu/yye/lab/teaching/spring2017-I529/

]]> Rahul Nayak https://bioinformaticsonline.com/opportunity/view/2337/clinical-genomics-informatics-europe-at-lisbon-portugal Wed, 14 Aug 2013 09:58:34 -0500 <![CDATA[Clinical Genomics & Informatics Europe at Lisbon, Portugal]]> Bio-IT World and Cambridge Healthtech Institute's fifth international Clinical Genomics & Informatics Europe conference will feature four main tracks on Clinical Exome Sequencing, High Scale Computing, Genome Informatics, and RNA-Seq and Transcriptome Analysis, as well as two pre-conference symposia on Clinical Epigenetics and Quantitative Digital Detection Technologies. The conference will tackle the huge amounts of sequencing data produced by new technologies that have introduced significant challenges for bioinformatics, both in terms of the analysis and interpretation of data and clinical implementation of novel variants. Members of the international community will come together to look at the science and informatics required to utilize next generation sequencing for the molecular diagnosis of complex diseases.

Dated : 04 Dec 2013 - 06 Dec 2013

More at : http://www.clinicalgenomicsinformatics.com/

]]> https://bioinformaticsonline.com/fun/view/42877/bioinformatician-on-valentines-day Sun, 14 Feb 2021 11:36:32 -0600 https://bioinformaticsonline.com/fun/view/42877/bioinformatician-on-valentines-day <![CDATA[Bioinformatician on Valentine's Day]]> Once asked to a bioinformatician "How is ur Valentine's Day?"

Bioinformatician replied:

if ($date == "Valentine's Day" && $me =! Bioinformatician) {

rose_day(); promise_day(); kiss_day();

}

else {

hack_genome(); ko-fi(); youtube(); do_scripting(); sleep();

)

]]> BioQueen