Radha Agarkar
A Bioinformatician
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Boku Chair of Bioinformatics
The Bioinformatics group at Boku University has two main areas of interest, underpinning a common goal, the study of complex systems in living organisms. To overcome the engineered redundancies and combinatorial effects prevalent in higher...Tetra-Nucleotide Analysis
By Jit 2760 days agochunlab.wordpress.com - A tetra-nucleotide is a fragment of DNA sequence with 4 bases (e.g. AGTC or TTGG). Pride et al. (2003) showed that the frequency of tetra-nucleotides in bacterial genomes contain useful, albeit weak, phylogenetic signals. Even though...6 PhD Students @ TU Dresden
At TU Dresden, Faculty of Computer Science, the DFG Research Training Group GRK 1907 “Role-based Software Infrastructures for continuous-context-sensitive Systems” offers the positions of 6 PhD Students (E 13 TV-L) for applicants interested in...Bioinformatician at 23andMe
23andMe’s mission is to help people access, understand, and benefit from the human genome. We are a group of passionate individuals excited to push the boundaries of what’s possible to help turn genetic insight into better health and personal...The Laboratoire de genomique fonctionelle
One persistent challenge of post genome biology remains the determination of the functions of all potential genes. In mammals this task is formidable given that a single gene can produce numerous protein isoforms through alternative pre-mRNA...A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
By Abhimanyu Singh 2752 days agowww.sanger.ac.uk - PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of programs that we developed: ABACAS, that is able to contiguate contigs from a de novo assembly against a closely related reference. IMAGE, an...Download assemblies from NCBI
By Bulbul 2749 days ago Comments (1)A new “Download assemblies” button is now available in the Assembly database. This makes it easy to download data for multiple genomes without having to write scripts.
Bioinformatics Algorithms
Last updated 4148 days ago by Jitendra Narayan Comments (6)An algorithm is a computable set of steps to achieve a desired result. We use algorithms every day. For example, a recipe for baking a cake is an algorithm. Most programs, with the exception of some artificial intelligence applications, consist of...CAR: Reconstructing Contiguous Regions of an Ancestral Genome
By Abhimanyu Singh 2746 days agowww.bx.psu.edu - We describe a new method for predicting the ancestral order and orientation of those intervals from their observed adjacencies in modern species. We combine the results from this method with data from chromosome painting experiments to produce a map...Tryst with a Bioinformatician # Dr Altan Kara
By Jitendra Narayan 2564 days agoDr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK MAM Research Center.
