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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/27331?offset=850</link>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22147/research-associate-bioinformatics-job-position-in-nipgr</guid>
  <pubDate>Sun, 19 Apr 2015 14:55:19 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics job position in NIPGR]]></title>
  <description><![CDATA[
<p>NIPGR Recruitment 2015 – Apply for Research Associate Posts</p>

<p>NIPGR is commonly known as National Institute of Plant Genome Research. Recently, it’s great opportunity for those candidates who are interested to do job in NIPGR. National Institute of Plant Genome Research (NIPGR) had found to build a bridge between the branches of natural sciences and due this connection it is steeping on the heaps of success. Its objectives to preserve, research, production and the advancement in the trait are very clear and also being appreciated by the nation and had been contributing for the further enrichment of the institute. NIPGR had announced the recruitment to further make improvements and amendments by the young potential in their panel. The recruitment is being announced for the post is mentioned below. We are giving a complete information to applicants for find their eligibility as per desired post under NIPGR Recruitment 2015 project but if the candidates are not satisfied with this information then they can download an official advertisement of NIPGR recruitment 2015 from the link defined ahead under the head of reference.</p>

<p>NIPGR Recruitment 2015 for the 1 post of Research Associate: National Institute of Plant Genome Research (NIPGR) had instigated the progression of the recruitment and this process is linked thoroughly so as the 1 post of Research Associate. Applicants are associated and linked with the education to be PHD degree in the life science, biotechnology, bioinformatics or molecular biology. Applicants are associated with the dispatch of the application along with the required certificates so as on the date of 24th Feb 2015.</p>

<p>The recruitment notification and application @ http://www.nipgr.res.in/careers/vacancies_latest.php#</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/36907/higlass-a-tool-for-exploring-genomic-contact-matrices-and-tracks</guid>
	<pubDate>Mon, 11 Jun 2018 09:44:49 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/36907/higlass-a-tool-for-exploring-genomic-contact-matrices-and-tracks</link>
	<title><![CDATA[HiGlass: a tool for exploring genomic contact matrices and tracks.]]></title>
	<description><![CDATA[HiGlass is a tool for exploring genomic contact matrices and tracks. Please take a look at the examples and documentation for a description of the ways that it can be configured to explore and compare contact matrices. To load private data, HiGlass can be run locally within a Docker container. The HiC data in the examples below is from Rao et al. (2014)

http://higlass.io/<p>Address of the bookmark: <a href="http://higlass.io/" rel="nofollow">http://higlass.io/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/22073/bcil-bioinformatics-bitp-application</guid>
	<pubDate>Fri, 17 Apr 2015 04:34:56 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/22073/bcil-bioinformatics-bitp-application</link>
	<title><![CDATA[BCIL Bioinformatics BITP Application !!]]></title>
	<description><![CDATA[<p>BCIL Bioinformatics BITP Application Form 2015 logoGrab latest Information! Biotech Consortium India Limited has announced a notification for offering admission in Biotech Industrial Training Program. The organization has invited online application from 7th April 2015 BCIL Admission 2015. BCIL has conducted an entrance exam which is scheduled on 20th June 2015. Candidates those who are looking for this program just go for it and don&rsquo;t miss this opportunity.<br /><br />To apply for Biotech Industrial Training Programme the candidates should have 50% marks in B.Tech/BE/M.Tech Degree in Bio technology, bio process technology and other related disciplines form any recognized institution. The organization has decided application fee of Rs.500/- for all candidates and that should be paid through demand draft. Applicants who satisfy the organization requirement, they can take their steps forward.<br /><br />Candidates should submit the online application before 10th May 2015. After registering the online application you need to take the hard copy of it and send through post. Print out of this application should be reached before 15th May 2015. All the latest updates like selection process, exam syllabus and other related information are updated soon at the main URL of the department and aspirants should keep in touch with this site. Further details of BCIL Bioinformatics BITP Application Form 2015 are explained below.<br /><br />Organization: Biotech Consortium India Limited<br /><br />Website URL: www.bcil.nic.in<br /><br />Location: New Delhi<br /><br />Course Name: Biotech Industrial Training Program<br /><br />Exam Name: BCIL Entrance Exam<br /><br />Educational Details: Applicants should complete their B.Tech/M.Tech/BE programs in Neuro- Science, Agricultural, Bio technology, bio process technology and other related disciplines having 50% aggregate from any authorized university.<br /><br />Application Fee: For all candidates application fee is Rs.500/- and it will be paid through Demand Draft drawn in favour of BCIL, New Delhi.<br /><br />How to Apply: Candidates who are willing to apply for this program they can apply through online mode. Then send the hard copy of registered application form to through post.<br /><br />Important Dates<br /><br />Opening Date of Submission Online Application Form: 7h April 2015<br /><br />Closing Date of Submission of Online Application Form: 10th May 2015<br /><br />Last Date of Receipt of Application Form: 15th May 2015<br /><br />Exam Date: 20th June 2015</p><p>More at http://bcil.nic.in/default.htm</p>]]></description>
	<dc:creator>Pranjali Yadav</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/37473/lsc-a-long-read-error-correction-tool</guid>
	<pubDate>Thu, 02 Aug 2018 07:39:46 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/37473/lsc-a-long-read-error-correction-tool</link>
	<title><![CDATA[LSC :a long read error correction tool]]></title>
	<description><![CDATA[<h2>Getting Started</h2>
<p>These simple steps will help you integrate LSC into your transcriptomics analysis pipeline.</p>
<ul>
<li>Read the&nbsp;<a href="https://www.healthcare.uiowa.edu/labs/au/LSC/LSC_requirements.asp">LSC_requirements</a>&nbsp;for running LSC.</li>
<li><a href="https://www.healthcare.uiowa.edu/labs/au/LSC/LSC_download.asp">Download</a>&nbsp;and set-up the LSC package.</li>
<li>Follow the&nbsp;<a href="https://www.healthcare.uiowa.edu/labs/au/LSC/LSC_tutorial.asp">tutorial</a>&nbsp;to see how LSC works on some example data.</li>
<li>Read the&nbsp;<a href="https://www.healthcare.uiowa.edu/labs/au/LSC/LSC_manual.asp">manual</a>&nbsp;if anything is unclear.</li>
<li>You're ready, Happy LSCing!</li>
</ul>
<h2>Latest publication</h2>
<p><span>Kin Fai Au, Jason Underwood, Lawrence Lee and Wing Hung Wong&nbsp;</span><br><strong>Improving PacBio Long Read Accuracy by Short Read Alignment&nbsp;</strong><span>[</span><a href="http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0046679">Manuscript</a><span>]&nbsp;</span><br><em>PLoS ONE</em><span>&nbsp;2012. 7(10): e46679. doi:10.1371/journal.pone.0046679</span></p><p>Address of the bookmark: <a href="https://www.healthcare.uiowa.edu/labs/au/LSC/" rel="nofollow">https://www.healthcare.uiowa.edu/labs/au/LSC/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22024/research-associate-bioinformatics-job-position-in-indian-agricultural-statistics-research-institute-iasri-pusa-new-delhi</guid>
  <pubDate>Tue, 14 Apr 2015 11:57:13 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics job position in Indian Agricultural Statistics Research Institute (IASRI), Pusa, New Delhi]]></title>
  <description><![CDATA[
<p>Indian Agricultural Statistics Research Institute is inviting applications from indian citizens for recruiting following posts:</p>

<p>Vacancies:<br />Research Associate-02<br />Age Limits:<br />Candidates age limit should be not more than 40 years as on date of interview.<br />Qualification:<br />Candidates should possess Ph.D in Bioinformatics/Agricultural Statistics/Statistics/Computer Science/Computer Application or equivalent.<br />Selection Process:<br />Selection will be based on interview.<br />How to Apply:<br />Eligible candidates may attend for interview along with application in prescribed format, recent passport size photograph pasted on the application form, bio-data, original certificates and self attested copies of relevant documents, all experience certificates, testimonials etc, held at Indian Agricultural Statistics Research Institute, Pusa, New Delhi on 18-04-2015 at 10:30 AM.<br />Last Date:<br />18-04-2015</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/37576/lrcstats-a-tool-for-evaluating-long-reads-correction-methods</guid>
	<pubDate>Wed, 22 Aug 2018 11:05:04 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/37576/lrcstats-a-tool-for-evaluating-long-reads-correction-methods</link>
	<title><![CDATA[LRCstats: a tool for evaluating long reads correction methods]]></title>
	<description><![CDATA[<p><span>LRCstats is an open-source pipeline for benchmarking DNA long read correction algorithms for long reads outputted by third generation sequencing technology such as machines produced by Pacific Biosciences. The reads produced by third generation sequencing technology, as the name suggests, are longer in length than reads produced by next generation sequencing technologies, such as those produced by Illumina. However, long reads are plagued by high error rates, which can cause issues in downstream analysis. Long read correction algorithms reduce the error rate of long reads either through self-correcting methods or using accurate, short reads outputted by next generation sequencing technologies to correct long reads.</span></p><p>Address of the bookmark: <a href="https://github.com/cchauve/lrcstats" rel="nofollow">https://github.com/cchauve/lrcstats</a></p>]]></description>
	<dc:creator>Aaryan Lokwani</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/22044/binc-sample-question-paper</guid>
	<pubDate>Thu, 16 Apr 2015 09:12:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/22044/binc-sample-question-paper</link>
	<title><![CDATA[BINC Sample Question Paper !!!]]></title>
	<description><![CDATA[<p>BINC sample question paper for round ONE.</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/22044" length="1260" type="text/plain" />
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/37800/heatmapper-web-enabled-heat-mapping-for-all</guid>
	<pubDate>Mon, 01 Oct 2018 08:34:41 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/37800/heatmapper-web-enabled-heat-mapping-for-all</link>
	<title><![CDATA[Heatmapper: web-enabled heat mapping for all]]></title>
	<description><![CDATA[<p><span>Heatmapper is a freely available web server that allows users to interactively visualize their data in the form of heat maps through an easy-to-use graphical interface. Heatmapper is a versatile tool that allows users to easily create a wide variety of heat maps for many different data types and applications. Heatmapper allows users to generate, cluster and visualize: </span></p>
<p><span>1)&nbsp;</span><span>expression-based heat maps</span><span>&nbsp;from transcriptomic, proteomic and metabolomic experiments; 2)&nbsp;</span><span>pairwise distance maps</span><span>; </span></p>
<p><span>3)&nbsp;</span><span>correlation maps</span><span>; </span></p>
<p><span>4)&nbsp;</span><span>image overlay heat maps</span><span>; </span></p>
<p><span>5)&nbsp;</span><span>latitude and longitude heat maps</span><span>&nbsp;and </span></p>
<p><span>6)&nbsp;</span><span>geopolitical (choropleth) heat maps</span><span>. </span></p>
<p><span>Heatmapper offers a number of simple and intuitive customization options for easy adjustments to each heat map&rsquo;s appearance and plotting parameters. Heatmapper also allows users to interactively explore their numeric data values by hovering their cursor over each heat map, or by using a searchable/sortable data table view.</span></p>
<p><span>Ref&nbsp;https://www.ncbi.nlm.nih.gov/pubmed/27190236</span></p><p>Address of the bookmark: <a href="http://www2.heatmapper.ca/" rel="nofollow">http://www2.heatmapper.ca/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/22068/binc-examination-2015</guid>
	<pubDate>Fri, 17 Apr 2015 03:34:28 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/22068/binc-examination-2015</link>
	<title><![CDATA[BINC examination 2015 !!!]]></title>
	<description><![CDATA[<p>BioInformatics National Certification (BINC) Examination 2015 organized by Department of Biotechnology, Government of India, New Delhi Pondicherry University, Puducherry</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/22068" length="281577" type="application/pdf" />
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/38449/koala-keggs-internal-annotation-tool-for-k-number-assignment-of-kegg-genes-using-ssearch-computation</guid>
	<pubDate>Wed, 12 Dec 2018 09:16:55 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/38449/koala-keggs-internal-annotation-tool-for-k-number-assignment-of-kegg-genes-using-ssearch-computation</link>
	<title><![CDATA[KOALA: KEGG&#039;s internal annotation tool for K number assignment of KEGG GENES using SSEARCH computation]]></title>
	<description><![CDATA[<p>KOALA (KEGG Orthology And Links Annotation) is KEGG's internal annotation tool for&nbsp;<a href="https://www.kegg.jp/kegg/ko.html">K number</a>&nbsp;assignment of KEGG GENES using SSEARCH computation. BlastKOALA and GhostKOALA assign K numbers to the user's sequence data by&nbsp;<a href="http://www.ncbi.nlm.nih.gov/blast/">BLAST</a>&nbsp;and&nbsp;<a href="http://www.bi.cs.titech.ac.jp/ghostx/">GHOSTX</a>&nbsp;searches, respectively, against a nonredundant set of KEGG GENES. Annotate Sequence in KEGG Mapper and Pathogen Checker in KEGG Pathogen are special interfaces to the BlastKOALA server and can be executed in an interactive mode. &nbsp;&nbsp; See&nbsp;<a href="https://www.kegg.jp/blastkoala/help_blastkoala.html" target="_blastkoala">Step-by-step Instructions</a>.</p>
<div>Reference: Kanehisa, M., Sato, Y., and Morishima, K. (2016) BlastKOALA and GhostKOALA: KEGG tools for functional characterization of genome and metagenome sequences. J. Mol. Biol. 428, 726-731. [<a href="http://www.ncbi.nlm.nih.gov/pubmed/26585406">pubmed</a>] [<a href="https://doi.org/10.1016/j.jmb.2015.11.006">pdf</a>]</div><p>Address of the bookmark: <a href="https://www.kegg.jp/blastkoala/" rel="nofollow">https://www.kegg.jp/blastkoala/</a></p>]]></description>
	<dc:creator>Abhimanyu Singh</dc:creator>
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