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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/27333?offset=1450</link>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/10124/jrf-at-bose-institute-kolkata</guid>
  <pubDate>Mon, 21 Apr 2014 19:41:14 -0500</pubDate>
  <link></link>
  <title><![CDATA[JRF at Bose Institute, Kolkata]]></title>
  <description><![CDATA[
<p>ADVT. No. S/BIC/01/2014-15</p>

<p>Bose Institute, Kolkata, invites applications from Indian Citizens for ONE (01) temporary position of Junior Research Fellow in the DBT sponsored project entitled, “Centre of Excellance (CoE) in Bioinformatics at Bose Institute”, running under Prof. Pinakpani Chakrabarti, Project Co-ordinatior, Bioinformatics Centre. The project is tenable upto 31.03.2017, but duration of the fellowship is one year only. The JRF will work with one of the faculty members of the center based on his / her motivation in any specific area on Bioinformatics.</p>

<p>Essential Qualification: 1st class M.Sc. / M.Tech degree in any stream of Chemical/ Biological Sciences with CSIR-UGC-NET-JRF / ICMR-JRF / DBT-JRF or CSIR-UGCNET- LS / GATE qualification.</p>

<p>Desirable qualification:</p>

<p>(i) Specialized knowledge in Organic / Physical chemistry.<br />(ii) Any exposure to research involving the small molecules (like drug) and / or protein structure determination or prediction.<br />(iii) Basic knowledge in computer programming, e.g. using FORTRAN, C, shell, perl etc.<br />(iv) Hands-on-experience on any of the following software : CHARMM/AMBER/NAMD/GROMACS,Gaussian/Gamess, Haddock/Autodock, Schrodinger etc. (or any other software serving similar purposes in molecular modeling)</p>

<p>Fellowship :</p>

<p>(i) Rs. 16,000/- p.m., plus admissible HRA &amp; Medical Benefit for M.Sc. with CSIRUGC NET-JRF/ICMR-JRF/DBT-JRF or M.Tech. with CSIR-UGC NETJRF/<br />ICMR-JRF/DBT-JRF/CSIR-UGC NET-LS/GATE<br />(ii) Rs. 12,000/- p.m., plus admissible HRA &amp; Medical Benefit for M.Sc. with CSIRUGC NET-LS/GATE</p>

<p>Age : Below 28 years as on the day on which the application is made (relaxable in case of SC/ST/OBC/WOMEN candidates only as per rule).</p>

<p>Interested and eligible candidates should apply on plain paper duly signed by them clearly mentioning the area of interest in research, possession of any desirable qualification (s) as mentioned above and quoting Advertisement No. on the envelop as well as application with complete Bio-data giving e-mail ID, Phone No. and details of qualification i.e. examination passed, year, division, percentage of marks, from Secondary onwards with attested copies of testimonials, addressed to the Registrar, Bose Institute, P-1/12, CIT Scheme VII-M, Kankurgachi, Kolkata-700054 on or before April 25, 2014.</p>

<p>The shortlisted candidates will be called for an interview. Applicants are advised to check our website for future updates.</p>

<p>Advertisement: www.boseinst.ernet.in/ADVT/14/p_2.pdf</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/879/bioprogramming</guid>
	<pubDate>Sun, 14 Jul 2013 16:29:53 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/879/bioprogramming</link>
	<title><![CDATA[BioProgramming]]></title>
	<description><![CDATA[<p>The completion of the first human genome drafts was just a start of the modern DNA sequencing era which resulted in further invention, improved development toward new advanced strategies of high-throughput DNA sequencing, so called the &ldquo;high-throughput next generation sequencing&rdquo; (HT-NGS). The decreasing genome sequencing cost and desire to explore and understand biological machanism at genomic level, speed up the genomic sequencing projects. In the fast growing HT-NGS technologies, the main challenge is to cope with the analysis of vast production of sequencing database through advanced bioinformatics tools. In oder to develope sotware/tools bioinformatician/ biological programmers need to expertise in any one one the programming language. However, sometime one language are not enough to handle all sort of biological needs, which compel us to learn new biologically suitable language to handle ever growing genome or protein sequences.</p><p>The next step after reading genetic code is writing a script to analyse and explore the hidden information. This tutorial is aimed to introduce you new biological programming languages with their packages/libraries, and assist in your scripting work.</p><p>Navigate the sub-section of this page [ see right hand side of the page for it ]</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/10262/research-fellow-phd-candidate-in-computational-biology-%E2%80%93-2-positions</guid>
  <pubDate>Fri, 25 Apr 2014 20:19:58 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research fellow (PhD candidate) in computational biology – 2 positions]]></title>
  <description><![CDATA[
<p>At the Department of Informatics two 4-year positions as research fellow are available in the field of computational biology connected to the Computational Biology Unit. The positions are linked to the project “Integrated genomics - linking transcriptional and translational regulation over developmental time” supported by the Bergen Research Foundation</p>

<p>The fate of a cell is ultimately the product of the regulation of its genes. Gene regulation is a coordinated process acting at multiple levels of which transcription and translation are the most prominent. The Valen group is dedicated to the fundamental question of how transcription and translation is integrated to obtain the desired protein abundance. The recent development of high-throughput next generation sequencing techniques to monitor both active translation and transcription has made it possible to study this connection at the genome scale.</p>

<p>This project aims to elucidate the links between regulation of translation and transcription. The applicant will analyze next generation sequencing data and model gene regulation on a genome-wide level to identify the features that affect the translational output of transcripts. The work will be done in close collaboration with experimental scientists who will test the predictions of the computational models.</p>

<p>Additional information on the position can be obtained by contacting Eivind Valen (eivind.valen@ii.uib.no).</p>

<p>The research fellow must take part in the University’s approved PhD program leading to the degree within a time limit of 3 years. Application for admission to the PhD program, including a project plan outline for the training module, will be worked out in collaboration with the research group in question.</p>

<p>In total, the fellowship period is 4 years, 25 % of this will be allocated to teaching and/or administrative duties. The fellowship period may be reduced if the successful applicant has held previous employment as a research fellow or similar.</p>

<p>http://www.jobbnorge.no/en/available-jobs/job/102235/research-fellow-phd-candidate-in-computational-biology-2-positions</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/2335/embo-practical-course-bioinformatics-large-scale-data-at-shenzhen-china</guid>
  <pubDate>Wed, 14 Aug 2013 09:50:56 -0500</pubDate>
  <link></link>
  <title><![CDATA[EMBO Practical Course, Bioinformatics, large-scale data, at Shenzhen, China]]></title>
  <description><![CDATA[
<p>This international advanced course will provide training on bioinformatics and statistics methods for genomic research. It will give insight into how biological knowledge can be generated from high-throughput sequencing (DNA-Seq, RNA-seq, ChIP-seq) experiments and will illustrate how to analyze such data. The course covers both the underlying statistical and algorithmic concepts, and the practice of how to automate and code such analyses using the scripting language R.</p>

<p>17 Nov 2013 -22 Nov 2013</p>

<p>More at http://events.embo.org/13-large-scale-data/</p>

<p>Online Registration: https://www.conference-service.com/pc13-47/welcome.cgi</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/10415/bioinformatician-stuck-in-wet-lab</guid>
	<pubDate>Tue, 06 May 2014 12:46:56 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/10415/bioinformatician-stuck-in-wet-lab</link>
	<title><![CDATA[Bioinformatician stuck in wet-lab]]></title>
	<description><![CDATA[<p>This guide is aimed at pet bioinformaticians, and is meant to guide them towards better career development.</p>
<p><strong>1. Make friends with local bioinformatics groups</strong><br> <strong>2. Talk to your computing group</strong><br> <strong>3. Obtain clear expectations</strong><br> <strong>4. Rewrite your job description</strong><br> <strong>5. Papers</strong><br> <strong>6. Attend bioinformatics meetings</strong><br> <strong>7. Try first, ask later</strong></p><p>Address of the bookmark: <a href="http://biomickwatson.wordpress.com/2013/04/23/a-guide-for-the-lonely-bioinformatician/" rel="nofollow">http://biomickwatson.wordpress.com/2013/04/23/a-guide-for-the-lonely-bioinformatician/</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/3963/spotlight-on-genomics-understanding-our-genes-a-step-to-personalized-medicine</guid>
	<pubDate>Mon, 26 Aug 2013 17:07:44 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/3963/spotlight-on-genomics-understanding-our-genes-a-step-to-personalized-medicine</link>
	<title><![CDATA[Spotlight on Genomics: Understanding Our Genes - A Step to Personalized Medicine]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/GQqKRkPQXmk" frameborder="0" allowfullscreen></iframe>(Visit: http://www.uctv.tv/) Learn about the essential role of genomics in the development of stem cell based therapies. Craig Venter, president and founder of the J. Craig Venter Institute and Catriona Jamieson, director for stem cell research at the UCSD Moores Cancer Center, speak about the future of personalized medicine in which genomics, the study of genes and their function, is applied to pinpoint specific treatments for patients. Sandra Dillon, a clinical trial participant, gives a patient's perspective. [7/2013] [Health and Medicine] [Show ID: 24530]]]></description>
	
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/5963/make-genomic-research-less-ethnically-biased</guid>
	<pubDate>Wed, 30 Oct 2013 16:08:17 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/5963/make-genomic-research-less-ethnically-biased</link>
	<title><![CDATA[Make Genomic Research Less Ethnically-Biased]]></title>
	<description><![CDATA[<p>Mexican billionaire Carlos Slim H&eacute;lu, the world&rsquo;s 2nd-richest man, is giving an additional $74 million to a genomics center in Boston in order to right a bias in the field&ndash;a kind of scientific racism, you might call it. The problem: most samples of DNA analyzed in biomedical research come from people of European descent.</p><p>Find more detail news at http://www.forbes.com/sites/erincarlyle/2013/10/30/carlos-slim-gives-another-74-million-to-make-genomic-research-less-ethnically-biased/?utm_campaign=forbesfbsf&amp;utm_source=facebook&amp;utm_medium=social</p>]]></description>
	<dc:creator>Shikha Logwani</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/42985/janggu-deep-learning-for-genomics</guid>
	<pubDate>Tue, 23 Mar 2021 05:14:43 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42985/janggu-deep-learning-for-genomics</link>
	<title><![CDATA[Janggu - Deep learning for Genomics]]></title>
	<description><![CDATA[<p><span>Janggu is a python package that facilitates deep learning in the context of genomics. The package is freely available under a GPL-3.0 license.</span></p>
<p><span>Detail tutorial at&nbsp;https://janggu.readthedocs.io/en/latest/</span></p>
<p><span>USE cases</span></p>
<p><span>https://github.com/wkopp/janggu_usecases</span></p><p>Address of the bookmark: <a href="https://github.com/BIMSBbioinfo/janggu" rel="nofollow">https://github.com/BIMSBbioinfo/janggu</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/34515/metasim-a-sequencing-simulator-for-genomics-and-metagenomics</guid>
	<pubDate>Mon, 04 Dec 2017 07:18:20 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/34515/metasim-a-sequencing-simulator-for-genomics-and-metagenomics</link>
	<title><![CDATA[MetaSim A Sequencing Simulator for Genomics and Metagenomics.]]></title>
	<description><![CDATA[<p><span>Our software can be used to&nbsp;</span><strong>generate collections of synthetic reads</strong><span>&nbsp;that reflect the diverse taxonomical composition of typical metagenome data sets. Based on a database of given genomes, the program allows the user to&nbsp;</span><strong>design a metagenome</strong><span>&nbsp;by specifying the number of genomes present at different levels of the NCBI taxonomy, and then to collect reads from the metagenome using a&nbsp;</span><strong>simulation of a number of different sequencing technologies</strong><span>. A population sampler optionally produces evolved sequences based on source genomes and a given evolutionary tree.&nbsp;</span></p><p>Address of the bookmark: <a href="http://ab.inf.uni-tuebingen.de/software/metasim/" rel="nofollow">http://ab.inf.uni-tuebingen.de/software/metasim/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/36647/bioinformatics-jobs-at-nibmg</guid>
  <pubDate>Wed, 16 May 2018 02:57:15 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics jobs at NIBMG]]></title>
  <description><![CDATA[
<p>NIBMG are looking for bright and motivated people in our big projects on cutting edge biomedical genomics research</p>

<p>http://www.nibmg.ac.in/academic/SyMeC-ICGC/SyMeC%20&amp;%20ICGC_May%202018.pdf</p>

<p>http://www.nibmg.ac.in/academic/plp/15_05_2018/AdvertisementMay2018.pdf</p>
]]></description>
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