<?xml version='1.0'?><rss version="2.0" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:georss="http://www.georss.org/georss" xmlns:atom="http://www.w3.org/2005/Atom" >
<channel>
	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/27427?offset=1600</link>
	<atom:link href="https://bioinformaticsonline.com/related/27427?offset=1600" rel="self" type="application/rss+xml" />
	<description><![CDATA[]]></description>
	
	
<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/24665/national-research-centre-on-plant-biotechnology-for-rajrf-positions</guid>
  <pubDate>Sat, 26 Sep 2015 20:32:49 -0500</pubDate>
  <link></link>
  <title><![CDATA[National Research Centre on Plant Biotechnology for RA/JRF positions]]></title>
  <description><![CDATA[
<p>National Research Centre on Plant Biotechnology - New Delhi, Delhi<br />National Research Centre on Plant Biotechnology recruitments job vacancies for RA/JRF positions</p>

<p>Name of post: Research Associate<br />Salary: Rs.36000/-+ 30% HRA*<br />Educational Qualification: Candidates should have PhD in Biotechnology / Bioinformatics Life Sciences (or) M.Sc Biotechnology / Bioinformatics with three years research experience in relevant field</p>

<p>Name of post: Junior Research Fellow<br />Salary: Rs.25000/-+ 30% HRA*<br />Educational Qualification: Candidates should have M.Sc in Biotechnology /Bioinformatics / Life Sciences with 1st Division or 60% marks or equivalent overall grade point from any recognized professional University</p>

<p>Age Limit: 35 years max. (5 years relaxation for SC/ST/OBC)</p>

<p>How to attend walk in interview?<br />Interested candidates may attend Walk- in-interview on 1st October, 2015 at 10 am at NRCPB, LBS Building, Pusa Campus, and New Delhi-110012 at the above address along with updated Bio-data (CV), ID Proof &amp; attested copies of Certificates and Original to prove qualification &amp; Experience.</p>

<p>Recruitment reference: http://www.nrcpb.org/jobslist</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/40591/modelstudio-a-package-automates-the-explanation-of-machine-learning-predictive-models</guid>
	<pubDate>Wed, 22 Jan 2020 23:58:11 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/40591/modelstudio-a-package-automates-the-explanation-of-machine-learning-predictive-models</link>
	<title><![CDATA[modelStudio: a package automates the explanation of machine learning predictive models]]></title>
	<description><![CDATA[<p>The&nbsp;<code>modelStudio</code>&nbsp;package automates the explanation of machine learning predictive models. This package generates advanced interactive and animated model explanations in the form of a serverless HTML site.</p>
<p>It combines&nbsp;<strong>R</strong>&nbsp;with&nbsp;<strong>D3.js</strong>&nbsp;to produce plots and descriptions for various local and global explanations. Tools for model exploration unite with tools for EDA (Exploratory Data Analysis) to give a broad overview of the model behavior.&nbsp;<code>modelStudio</code>&nbsp;is a fast and condensed way to get all the answers without much effort. Break down your model and look into its ingredients with only a few lines of code.</p><p>Address of the bookmark: <a href="https://modeloriented.github.io/modelStudio/index.html" rel="nofollow">https://modeloriented.github.io/modelStudio/index.html</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/24942/bioinformatics-faculty-at-university-of-hyderabad</guid>
  <pubDate>Wed, 14 Oct 2015 22:53:44 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Faculty at UNIVERSITY OF HYDERABAD]]></title>
  <description><![CDATA[
<p>UNIVERSITY OF HYDERABAD</p>

<p>(A Central University established by an Act of Parliament)</p>

<p>Prof. C.R.Rao Road, P.O. Central University Campus, Gachibowli,</p>

<p>Hyderabad - 500 046</p>

<p>Advt.No. UH/HR/Rectt-2015/02 dt. 12.10.2015</p>

<p>The University invites applications from the Indian citizens for the following positions:</p>

<p>Professor / Associate Professor / Assistant Professor :</p>

<p>    Biotechnology &amp; Bioinformatics</p>

<p>Last date : 16th November 2015</p>

<p>More Info : http://www.uohyd.ac.in/images/recruitment/advt-121015.pdf</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25250/srfjrf-biotechnology-nrcpb-delhi-delhi</guid>
  <pubDate>Fri, 13 Nov 2015 02:52:11 -0600</pubDate>
  <link></link>
  <title><![CDATA[SRF/JRF Biotechnology NRCPB - Delhi, Delhi]]></title>
  <description><![CDATA[
<p>SRF/JRF job position in National Research Centre on Plant Biotechnology (NRCPB)</p>

<p>JRF /1</p>

<p>Qualification : Master’s Degree in Biotechnology / life sciences with four years Bachelor’s Degree (or) Master’s Degree in Biotechnology / life sciences with NET qualification with 1st Division or 60% marks or equivalent overall grade point average . Non NET/ Master’s degree with three years Bachelor’s degree as per DST/DBT norms. Desirable: Working Experience in Molecular Biology Techniques, genome sequence analysis Bioinformatics</p>

<p>Emoluments : Rs.25000</p>

<p>SRF</p>

<p>Qualification : Master’s degree in Biotechnology/Bioinformatics/Life Science with 1st division or 60% marks or equivalent overall grade point average with 4 year of Bachelor’s degree or 5 years integrated Masters degree. Desirable: Working experience in Bioinformatics, genomic analysis</p>

<p>Emoluments : Rs.25000/</p>

<p>Age Limit: 35 years</p>

<p>Walk-in-interview will be held on 20th November 2015 at 10 AM at NRCPB, LBS Building, Pusa Campus, and New Delhi-110012</p>

<p>More at http://www.nrcpb.org/sites/default/files/Adverdisement_0.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/42359/dnasp-dna-sequence-polymorphism-is-a-software-package-for-the-analysis-of-dna-polymorphisms</guid>
	<pubDate>Wed, 25 Nov 2020 19:51:38 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42359/dnasp-dna-sequence-polymorphism-is-a-software-package-for-the-analysis-of-dna-polymorphisms</link>
	<title><![CDATA[DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms]]></title>
	<description><![CDATA[<p><span>DnaSP, DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms using data from a single locus (a multiple sequence aligned -MSA data), or from several loci (a Multiple-MSA data, such as formats generated by some assembler RAD-seq software). DnaSP can estimate several measures of DNA sequence variation within and between populations in noncoding, synonymous or nonsynonymous sites, or in various sorts of codon positions), as well as linkage disequilibrium, recombination, gene flow and gene conversion parameters.</span></p><p>Address of the bookmark: <a href="http://www.ub.edu/dnasp/" rel="nofollow">http://www.ub.edu/dnasp/</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25097/teaching-careers-2015-at-uttaranchal-college-of-science-technology</guid>
  <pubDate>Mon, 02 Nov 2015 04:00:26 -0600</pubDate>
  <link></link>
  <title><![CDATA[Teaching Careers 2015 at Uttaranchal College of Science &amp; Technology]]></title>
  <description><![CDATA[
<p>Teaching, Non-teaching Careers 2015<br />Uttaranchal College of Science &amp; Technology - Dehra Dun, Uttarakhand<br />Teaching, Non-teaching Careers 2015 at Uttaranchal College of Science and Technology, Dehradun</p>

<p>Below mentioned teaching and non-teaching job vacancies are to be recruited.</p>

<p>Assistant Professors job vacancies in the disciplines of:<br />Biotechnology<br />Bioinformatics</p>

<p>Eligibility:<br />Masters Degree in the Discipline along with Ph.D</p>

<p>How to apply:<br />Candidates who possess requisite eligibility criteria for all the above mentioned positions required to apply on or before 10 days from the date of vacancy notification.</p>

<p>Candidates required to send copies of all the documents along with application</p>

<p>Contact details:<br />Uttaranchal College of Science &amp; Technology<br />Nagal Hatnala, P.O. Kulhan Sahastradhara Road,<br />Dehradun-248001, Uttarakhand, India</p>

<p>More details can be had at:<br />Dehradun Classifieds e-paper dated 01.11.2015 at page number 40-41</p>

<p>About Employer</p>

<p>Uttaranchal College of Science and Technology, Dehradun, Uttarakhand is affiliated to HNB Garhwal University, Srinagar, Uttarakhand</p>

<p>Employer:	Uttaranchal College of Science &amp; Technology<br />Address:	Uttaranchal College of Science &amp; Technology Nagal Hatnala, P.O. Kulhan Sahastradhara Road, Dehradun-248001, Uttarakhand, India<br />Email:	info@ucstdoon.com<br />URL:	http://www.ucstdoon.com<br />Phone:	0135-2607011, 607413, 3254785, 09719146701</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25150/project-assistant-ii-jobs-opportunity-in-national-chemical-laboratory-ncl-on-temporary-basis</guid>
  <pubDate>Fri, 06 Nov 2015 01:36:16 -0600</pubDate>
  <link></link>
  <title><![CDATA[Project Assistant II Jobs opportunity in National Chemical Laboratory (NCL) on temporary basis]]></title>
  <description><![CDATA[
<p>No. Bio/NCIM/3 </p>

<p>Project Assistant II Jobs opportunity in National Chemical Laboratory (NCL) on temporary basis</p>

<p>Project Code No. : GAP312626</p>

<p>Title of the Project : Microbial ecology and distribution of geochemical cycling genes in an hot spring ecosystem</p>

<p>No. of Post : 01</p>

<p>Qualifications : M.Sc./B.Tech/M.Tech in Computational biology/ Bioinformatics from recognized university with minimum 60 % marks (aggregate) </p>

<p>Desirable : Good knowledge of computational skills, Linux (command line and GUI) and Unix; Perl / Python / R /C-programming. Practical knowledge of analysis of Next generation sequence datasets (amplicon sequencing, whole metagenome, and complete genome sequencing) with reference to microbes. Analysis and statistical validation of NGS data generated from different chemistry platforms. Some wet-lab experience in microbial system would be an added advantage as project involves some travel.</p>

<p>Emoluments : Rs. 16,000/- </p>

<p>Age Limit : 28 years<br />How to apply</p>

<p>The application with the above information duly signed together with photo-copies of relevant certificates/testimonials should be addressed to : The Head, NCIM Resource Centre (Attn Dr. M.S. DHARNE), National Chemical Laboratory, Pune 411 008, so as to reach on or before 16th November 2015.</p>

<p>More at http://www.ncl-india.org/files/JoinUs/JobVacancies/TemporaryJobs.aspx?menuid=ql6&amp;childmenustripid=divSubQL6</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/39039/dotplotly-generate-an-interactive-dot-plot-from-mummer-or-minimap-alignments</guid>
	<pubDate>Thu, 21 Feb 2019 10:22:17 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/39039/dotplotly-generate-an-interactive-dot-plot-from-mummer-or-minimap-alignments</link>
	<title><![CDATA[dotPlotly: Generate an interactive dot plot from mummer or minimap alignments]]></title>
	<description><![CDATA[<p>Create an interactive dot plot from mummer output OR PAF format</p>
<p>R script that makes a plotly interactive and/or static (png/pdf) dot plot.</p>
<p><a href="https://tom-poorten.shinyapps.io/dotplotly_shiny/">Shiny app available for testing</a></p><p>Address of the bookmark: <a href="https://github.com/tpoorten/dotPlotly" rel="nofollow">https://github.com/tpoorten/dotPlotly</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25286/postdoctoral-positions-are-available-at-instem</guid>
  <pubDate>Tue, 24 Nov 2015 23:24:28 -0600</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral positions are available at inStem]]></title>
  <description><![CDATA[
<p>A position for a Postdoctoral fellow is available in the area of bioinformatics and genomics. The Institute for Stem Cell Biology and Regenerative Medicine (inStem) is a highly collaborative environment and we are seeking an individual who can interface with both wet and dry lab scientists to use profiling technologies to advance our understanding of tissue regeneration and repair. Consequently, the selected candidate for this position can expect world-class training in integrating the fields of cell biology, molecular biology, animal models, and genomics/proteomics.</p>

<p>We are seeking an individual with expertise in analyzing next generation sequencing data, mutation calling in exome seq data, network inference, data integration, and modeling. Competitive candidates would also have programming experience in scripting languages with perl, C, C++, and R programming. This position requires a PhD in Computational Biology, Bioinformatics, Biostatistics or related fields, and evidence of scientific productivity through publications in international journals. Motivation to gain an in-depth understanding of biological phenomena is required! Applications should include a current CV and names of at least three references. Application packages and inquiries regarding this position can be sent to Dr. Dasaradhi Palakodeti ( dasaradhip@instem.res.in ) or Dr. Colin Jamora ( colinj@instem.res.in). Screening of applications will commence immediately and the position will remain open until filled.</p>

<p>More at https://www.instem.res.in/open-positions</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43319/k-mers-tutorial-classification-and-taxonomy</guid>
	<pubDate>Thu, 26 Aug 2021 10:28:43 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43319/k-mers-tutorial-classification-and-taxonomy</link>
	<title><![CDATA[k-mers tutorial - classification and taxonomy]]></title>
	<description><![CDATA[<p>DNA k-mers underlie much of our assembly work, and we (along with many others!) have spent a lot of time thinking about how to&nbsp;<a href="http://www.pnas.org/content/109/33/13272">store k-mer graphs efficiently</a>,&nbsp;<a href="http://ivory.idyll.org/blog/what-is-diginorm.html">discard redundant data</a>, and&nbsp;<a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0101271">count them efficiently</a>.</p>
<p>More recently, we've been enthused about&nbsp;<a href="http://joss.theoj.org/papers/3d793c6e7db683bee7c03377a4a7f3c9">using k-mer based similarity measures</a>&nbsp;and&nbsp;<a href="http://ivory.idyll.org/blog/2016-sourmash-sbt.html">computing and searching k-mer-based sketch search databases for all the things</a>.</p>
<p>But I haven't spent too much talking about using k-mers for taxonomy, although that has become an&nbsp;<em>ahem</em>&nbsp;area of interest recently,&nbsp;<a href="http://www.biorxiv.org/content/early/2017/07/03/155358">if you read into our papers a bit</a>.</p>
<p>In this blog post I'm going to fix this by doing a little bit of a literature review and waxing enthusiastic about other people's work. Then in a future blog post I'll talk about how we're building off of this work in fun! and interesting? ways!</p><p>Address of the bookmark: <a href="http://ivory.idyll.org/blog/2017-something-about-kmers.html" rel="nofollow">http://ivory.idyll.org/blog/2017-something-about-kmers.html</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
</item>

</channel>
</rss>