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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/27696?offset=1290</link>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/21625/agricul-agricultural-scientists-recruitment-board-tural-scientists-recruitment-board-new-delhi-110-012</guid>
  <pubDate>Wed, 11 Mar 2015 09:18:37 -0500</pubDate>
  <link></link>
  <title><![CDATA[AGRICUL AGRICULTURAL SCIENTISTS RECRUITMENT BOARD TURAL SCIENTISTS RECRUITMENT BOARD NEW DELHI-110 012]]></title>
  <description><![CDATA[
<p>ADVERTISEMENT NO. 01/2015</p>

<p>PRINCIPAL SCIENTIST Pay Band: Minimum pay of `43,000 in the PB-4 of `37400-67000/- + RGP of `10,000/-.</p>

<p>Age: The candidates must not have attained the age of 52 years as on 24.03.2015. There shall be no age limit for the Council’s employees.</p>

<p>ICAR-NATIONAL INSTITUTE OF BIOTIC STRESS MANAGEMENT, RAIPUR (CHHATTISGARH)</p>

<p>57. Principal Scientist (Agricultural Entomology) (Two post)</p>

<p>Qualifications Essential:</p>

<p>(i) Doctoral degree in Agricultural Entomology including relevant basic sciences.</p>

<p>(ii) 10 years experience in the relevant subject out of which at least 8 years should be as Scientist/ Lecturer/Extension Specialist or in an equivalent position in the Pay Band- 3 of `15600-39100 with Grade Pay of `5400/`6000/`7000/`8000 and 2 years as a Senior Scientist or in an equivalent position in the Pay Band- 4 of ` 37400-67000 with Grade Pay of ` 8700/ ` 9000.</p>

<p>(iii) The candidate should have made contribution to research/teaching/extension education as evidenced by published work/innovations and impact.</p>

<p>Desirable:</p>

<p>(i) Experience of using frontiers research tools in management of insect pests of crop plants.</p>

<p>(ii) Evidence of contributions to relevant field through publications/ patents/citation index to suggest a vision/perspective in biotic stress research.</p>

<p>61. Principal Scientist (Bioinformatics) (One post)</p>

<p>Qualifications Essential:</p>

<p>(i) Doctoral degree in Bioinformatics including relevant basic sciences. (ii) &amp; (iii) As in item no. 57 above.</p>

<p>Desirable:</p>

<p>(i) Experience of using bioinformatics for advancement of knowledge and for research on biotic stress management.</p>

<p>(ii) Evidence of contributions to relevant field through publications/patents/citation index to suggest a vision/perspective in biotic stress research.</p>

<p>http://asrb.org.in/administrator/uploads_dir/1424859407english.pdf</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/16686/sequence-viewer-download-transcripts-exons-and-proteins</guid>
	<pubDate>Mon, 15 Sep 2014 17:30:36 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/16686/sequence-viewer-download-transcripts-exons-and-proteins</link>
	<title><![CDATA[Sequence Viewer: Download Transcripts, Exons and Proteins]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/ZWnLyYKozaI" frameborder="0" allowfullscreen></iframe>How to download FASTA sequence for certain gene features while in the NCBI's Sequence Viewer.

Sequence Viewer homepage:
www.ncbi.nlm.nih.gov/projects/sviewer/

Sequence Viewer playlist:
https://www.youtube.com/playlist?list=PL76D7EE6A6A8AC1C3]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/21680/research-associate-at-national-research-centre-on-plant-biotechnology-new-delhi</guid>
  <pubDate>Mon, 16 Mar 2015 03:22:26 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate at National Research Centre on Plant Biotechnology New Delhi]]></title>
  <description><![CDATA[
<p>Walk-in interview will be held on 24-03-2015 at 10:00 AM at NRCPB, New Delhi for filling Research Associate and Senior Research Fellow positions as mentioned below. The positions are temporary and are initially offered for a period of one year. Details such as emoluments, qualifications, application format etc., are given below. Desirous candidates should report for interview latest by 10:30 AM with the application in the prescribed format, copies and originals of certificates, thesis and documents. No TA/DA will be provided for attending the interview.</p>

<p>ICAR-NPTC: Fibre development in flax/linseed.</p>

<p>(Job # 1) Research Associate (one) (Bioinformatics)</p>

<p>Rs.24000+ 30% HRA) for Ph.D. and for M. Sc Rs.23000/‐ (+ 30% HRA)</p>

<p>Ph.D. Degree in Bioinformatics/Molecular Biology/Biotechnology/ Genetics/allied sciences; or M. Sc in Bioinformatics/ Biotechnology/Life Sciences/ allied sciences with 1st division or 60% marks or equivalent overall grade point average with at least two years of research experience as evidenced from Fellowship/ Associate ship. 2 years research experience in bioinformatic data analysis/molecular biology techniques, and high throughput DNA/RNA sequencing, and transcriptome data analysis. Research paper with IF&gt;1 will be desirable</p>

<p>ICAR-NPTC: Shade avoidance/low-light tolerance in rice.</p>

<p>General Terms &amp; Conditions applicable to all the positions: <br />Age Limit: 35 years max. (5 years relaxation for SC/ST/OBC and woman candidates as per ICAR rules). <br />The positions are purely temporary, on a contractual basis and are initially offered for one year. <br />Originals must be shown for verification. 7. Research experience (Experience certificate from previous employer to be attached): I hereby declare that the information provided above is true to the best of my knowledge. Date: Signature</p>

<p>Advertisement:</p>

<p>www.nrcpb.org/sites/default/files/ICAR-NPTC%20DBT%20RA%20SRF%20interview%2024th%20March.pdf</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/34565/fogsaa-fast-optimal-global-sequence-alignment-algorithm</guid>
	<pubDate>Fri, 08 Dec 2017 14:41:08 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/34565/fogsaa-fast-optimal-global-sequence-alignment-algorithm</link>
	<title><![CDATA[FOGSAA: Fast Optimal Global Sequence Alignment Algorithm]]></title>
	<description><![CDATA[<p>Sequence alignment algorithms are widely used to infer similarirty and the point of differences between pair of sequences. FOGSAA is a fast Global alignment algorithm. It is basically a branch and bound approach which starts branch expansion in a greedy way taking the symbols from the given pair of sequences (protein or nucleotide) and results in an optimal alignment faster than conventional dymanic programming techniques. It is also better than the heuristic methods with respect to alignment quality.</p><p>Address of the bookmark: <a href="http://www.isical.ac.in/~bioinfo_miu/FOGSAA.htm" rel="nofollow">http://www.isical.ac.in/~bioinfo_miu/FOGSAA.htm</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/21893/postdoctoral-fellowship-in-bioinformatics-and-evolutionary-genomics</guid>
  <pubDate>Wed, 01 Apr 2015 21:36:42 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Fellowship in Bioinformatics and Evolutionary Genomics]]></title>
  <description><![CDATA[
<p>Postdoctoral Fellowship in Bioinformatics and Evolutionary Genomics<br />Organization<br />National Human Genome Research Institute, National Institutes of Health<br />http://genome.gov/Staff/Baxevanis<br />Job Location<br />Bethesda, MD<br />Job Description</p>

<p>A postdoctoral training position is currently available in the Computational and Statistical Genomics Branch (CSGB) of the National Human Genome Research Institute (NHGRI). The position is located in the laboratory of Andy Baxevanis, Ph.D., whose research group uses comparative genomics approaches to better-understand the molecular innovations that drove the surge of diversity in early animal evolution. The overarching theme of Dr. Baxevanis’ research program is focused on how non-traditional animal models convey critical insights into human disease research.</p>

<p>Candidates should have or be close to obtaining a Ph.D. or equivalent degree in bioinformatics, computational biology, computer science, molecular biology, or a closely related field. Candidates with a background in evolutionary biology are particularly encouraged to apply. Programming skills and experience in the application of computational methods to genomic data are highly desirable. Applicants must possess good communication skills and be fluent in both spoken and written English. The ability to learn how to use new software and quickly become expert in its use, critical thinking, problem-solving abilities, and the ability to work semi-independently are required.<br />How to Apply</p>

<p>Interested applicants should submit a curriculum vitae, a detailed letter of interest, and the names of three potential referees to Dr. Baxevanis at andy@mail.nih.gov.<br />About Our Organization</p>

<p>The NIH Intramural Research Program is on the Bethesda, Maryland campus and offers a wide array of training opportunities for scientists early in their careers. The funding for this position is stable and offers the trainee wide latitude in the design and pursuit of their research project. The successful candidate will have access to NHGRI’s established and robust bioinformatics infrastructure, as well as resources made available through NIH’s Center for Information Technology (CIT) and the National Center for Biotechnology Information (NCBI).</p>

<p>For more information on CSGB and NHGRI’s Intramural Research Program, please see http://genome.gov/DIR/.</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41689/medaka-sequence-correction-provided-by-ont-research</guid>
	<pubDate>Mon, 18 May 2020 16:28:00 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41689/medaka-sequence-correction-provided-by-ont-research</link>
	<title><![CDATA[medaka: Sequence correction provided by ONT Research]]></title>
	<description><![CDATA[<p><code>medaka</code><span>&nbsp;is a tool to create a consensus sequence from nanopore sequencing data. This task is performed using neural networks applied from a pileup of individual sequencing reads against a draft assembly. It outperforms graph-based methods operating on basecalled data, and can be competitive with state-of-the-art signal-based methods, whilst being much faster.</span></p><p>Address of the bookmark: <a href="https://github.com/nanoporetech/medaka" rel="nofollow">https://github.com/nanoporetech/medaka</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
</item>

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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/21934/ra-bioinformatics-at-bose-institute</guid>
  <pubDate>Tue, 07 Apr 2015 03:30:25 -0500</pubDate>
  <link></link>
  <title><![CDATA[RA Bioinformatics at Bose Institute]]></title>
  <description><![CDATA[
<p>Bose Institute, Kolkata, invites online applications from Indian Citizens for recruitment of Research Associate (05 posts) under Institute Plan Programmes : Improvement of Plants : Biotechnological, Genomic and Proteomic Approaches (programme No. – I), Bioinformatics and Computational Biology (programme No. – III), Microbial Genomics and Infection Biology (programme No. – V) and Basic &amp; Applied Problems in Physical and Environmental Sciences (programme No. – VII). All the posts are tenable for one (01) year.</p>

<p>ESSENTIAL QUALIFICATION: PH.D. DEGREE IN LIFE SCIENCES / PHYSICAL SCIENCE.</p>

<p>Research Associate for Programme No. –I Specialization in the area of plant molecular biology or plant proteomic study or plant pathogen interaction.<br />Research Associate for Programme No. –I Specialization in the area of plant / fungal Biotechnology, tissue culture and molecular biology<br />Research Associate for Programme No. –III Specialization in the area of structural biology and protein crystallography.<br />Research Associate for Programme No. – V Specialization in the area of microbial physiology (metabolism) or environmental microbiology, with experience in microbial genomics and proteomics.<br />Research Associate for Programme No. – VII Specialization in the area of Theoretical High Energy Astrophysics or Astroparticle Physics. Proven record of independent research experience in Astrophysical<br />Radiation Magnetohydrodynamics or Cosmic Ray Astrophysics. Experience in numerical techniques and /or date analysis would be additional advantage.<br />Associateship : 22,000/- p.m., plus admissible H.R.A. and Medical benefit.<br />Age: Below 3 Age : Below 35 years (Relaxable in case of SC/ST/OBC/Women candidates only as per rule).<br />SELECTION PROCEDURE FOR BOSE INSTITUTE- RESEARCH ASSOCIATE POST:</p>

<p>Candidates can apply on or before 13/4/2015.<br />No detailed information about the selection procedure is mentioned in the recruitment notification.<br />HOW TO APPLY FOR RESEARCH ASSOCIATE VACANCY IN BOSE INSTITUTE:</p>

<p>Interested and eligible candidates may read the application procedures and instructions carefully before applying through online as well as submitting the hard copy of the same. Candidates those who has submitted their Ph.D. Thesis and can produce Provisional Ph.D. Certificate at the time of Interview may also apply </p>

<p>Ref<br />Bose Institute Recruitment 2015 –  ADVT. NO. : BI/IF/35/2014-15.</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44555/ultra-ultra-locates-tandemly-repetitive-areas-effective-labeling-of-repetitive-genomic-sequence</guid>
	<pubDate>Sat, 08 Jun 2024 16:03:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44555/ultra-ultra-locates-tandemly-repetitive-areas-effective-labeling-of-repetitive-genomic-sequence</link>
	<title><![CDATA[ULTRA (ULTRA Locates Tandemly Repetitive Areas) : Effective Labeling of Repetitive Genomic Sequence]]></title>
	<description><![CDATA[<p dir="auto">ULTRA is a tool to find and annotate tandem repeats inside genomic sequence. It is able to find repeats of any length and of any period (up to a maximum period of 4000). It can find highly decayed repeats missed by other software, and it will also be able to find very large repeats in highly repetitive sequence, regardless of the size of sequence or length of repeats. ULTRA offers meaningful annotation scores and can produce annotation P-values at user request.</p>
<p dir="auto">More at&nbsp;https://www.biorxiv.org/content/10.1101/2024.06.03.597269v1</p><p>Address of the bookmark: <a href="https://github.com/TravisWheelerLab/ULTRA" rel="nofollow">https://github.com/TravisWheelerLab/ULTRA</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/poll/view/21982/which-bioinformatics-journals-do-you-follow</guid>
	<pubDate>Fri, 10 Apr 2015 12:10:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/poll/view/21982/which-bioinformatics-journals-do-you-follow</link>
	<title><![CDATA[Which Bioinformatics Journals Do You Follow?]]></title>
	<description><![CDATA[<p><span><span>Which are your favorite bioinformatics journals? The ones that you check every month or so, or that you are subscribed to?</span></span></p>]]></description>
	<dc:creator>Tenzin Paul</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/33942/mulan-multiple-sequence-local-alignment-and-conservation-visualization-tool</guid>
	<pubDate>Thu, 20 Jul 2017 08:02:32 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/33942/mulan-multiple-sequence-local-alignment-and-conservation-visualization-tool</link>
	<title><![CDATA[Mulan: MUltiple sequence Local AligNment and conservation visualization tool]]></title>
	<description><![CDATA[<p><span>Mulan performs multiple (2 or more) sequence alignments with an efficient and rapid "full local" alignment strategy that ensures a recapitulation of evolutionary sequence rearrangements (such as inversions and reshuffling) in any of the species. It combines&nbsp;</span><a href="http://www.bx.psu.edu/miller_lab/" target="_new"><em>refine</em>&nbsp;and&nbsp;<em>tba</em></a><span>&nbsp;tools to align either "draft" or "finished" quality sequences. Mulan provides a dynamic graphical interface to align and visualize conservation profiles for evolutionarily distant and closely related species.</span><br><span></span></p>
<p><span>Input formats, automated data upload from the&nbsp;</span><a href="http://genome.ucsc.edu/" target="_new">UCSC Genome Browser</a><span>, gene annotation, annotation of repetitive elements, and progress report were previously described in the&nbsp;</span><a href="https://zpicture.dcode.org/zpInstructions.html" target="_zp">zPicture instructions</a><span>&nbsp;and we refer the users to these materials for more details. This introduction is mainly focused on some novel features unique to the Mulan.</span><span><br></span></p><p>Address of the bookmark: <a href="https://mulan.dcode.org/mulanInstructions.php" rel="nofollow">https://mulan.dcode.org/mulanInstructions.php</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
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