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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/27806?offset=1100</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/45115/postdoctoral-fellow-in-genomics-and-comparative-genomics</guid>
  <pubDate>Thu, 09 Apr 2026 02:12:32 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Fellow in Genomics and Comparative Genomics]]></title>
  <description><![CDATA[
<p>Environnement de travail (Work environment):<br />The successful candidate will join a dynamic research group working<br />on the ecology and evolution of host'parasite'environment<br />interactions in non-model organisms, particularly snail vectors and<br />its trematode parasites. She/He will conduct genomic analyses aimed at<br />understanding host'parasite coevolution and the genetic architecture<br />of resistance in the invasive snail Pseudosuccinea columella to the<br />zoonotic parasite Fasciola hepatica. This thematic line is embedded<br />within the regional scientific project InvaSnail financed by the<br />ExposUM initiative from the Montpellier. The position is based in<br />Montpellier, a vibrant scientific hub in Southern France internationally<br />recognized for excellence in ecology and evolutionary biology. The IHPE<br />laboratory provides a collaborative research environment with access<br />to high-performance computing facilities, sequencing platforms, and<br />strong interdisciplinary interactions across research institutions in<br />the Montpellier area. University</p>

<p>Main mission:</p>

<p>Develop and implement strategies for whole-genome sequencing of non-model<br />species<br />Generate high-quality de novo genome assemblies using short- and long-read<br />sequencing technologies<br />Perform genome annotation and structural/functional characterization<br />Conduct comparative genomic analyses across related species or populations<br />Design and implement genome-wide association studies (GWAS) to identify<br />loci associated with phenotypic or adaptive traits<br />Integrate genomic, phenotypic, and environmental datasets<br />Contribute to the development of reproducible bioinformatics pipelines</p>

<p>ActivitÃ©s (Activities):</p>

<p>Lead the genomic component of the research project<br />High-molecular-weight DNA extraction optimization<br />Long-read genome assembly (PacBio HiFi / ONT)<br />Genome polishing and quality assessment (BUSCO, QUAST)<br />Structural and functional annotation<br />Variant discovery (SNPs, indels, SVs)<br />Population genomic analyses (FST, demographic inference)<br />Mixed-model GWAS accounting for structure<br />Workflow development (Snakemake/Nextflow)<br />HPC-based pipeline implementation<br />Publish results in peer-reviewed journals<br />Present findings at international conferences<br />Collaborate with experimental and computational team members<br />Contribute to project development<br />Mentor graduate students when appropriate</p>

<p>More at https://evol.mcmaster.ca/brian/evoldir/PostDocs//MontpellierU.ComparativeGenomics</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/3013/python-and-biopython-tutorial</guid>
	<pubDate>Fri, 23 Aug 2013 06:47:40 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/3013/python-and-biopython-tutorial</link>
	<title><![CDATA[Python and BioPython Tutorial]]></title>
	<description><![CDATA[<p>A quickstart tutorial that allows to become familiar with the Python language. The exercises expect knowledge of basic concepts of programming. A group of 2nd year computer science students with no previous Python knowledge required 60'-90' to complete the exercises. With about 3 hours time, the exercise is suitable for non-programmers as well.</p><p>Address of the bookmark: <a href="http://www.biotnet.org/training-materials/python-programmers" rel="nofollow">http://www.biotnet.org/training-materials/python-programmers</a></p>]]></description>
	<dc:creator>Manshi Raghubanshi</dc:creator>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/45226/professor-of-bioinformatics</guid>
  <pubDate>Sat, 15 Aug 2026 12:39:03 -0500</pubDate>
  <link></link>
  <title><![CDATA[Professor of Bioinformatics]]></title>
  <description><![CDATA[
<p>The Department of Statistics are seeking to recruit a Professor of Bioinformatics. The professorship will be held alongside a Fellowship at University College.</p>

<p>The Department is at the forefront of developments in machine learning, data science, and computational methods for understanding complex biological systems, integrating these approaches into both its research and teaching. This role offers significant scope to shape the future of bioinformatics and quantitative biology at Oxford and beyond.</p>

<p>You will be expected to develop and lead a world-class research programme in bioinformatics, helping to strengthen Oxford's position in areas such as statistical genomics, computational biology, machine learning for biological data, engineering biology, systems biology, and biomedical data science. We value the breadth of approaches that contribute to modern bioinformatics. Whatever your particular focus, you will understand how quantitative and computational methods can be applied to important biological and biomedical questions, and how collaboration across disciplines can generate new insights and opportunities. Alongside your own research, you will support the development of doctoral students, postdoctoral researchers, and early-career academics. You will contribute to our teaching at undergraduate and postgraduate level, delivering lectures, supervising student projects, and supporting graduate research students.</p>

<p>We are looking for someone who combines scholarly distinction with a collaborative and ambitious approach to research. You will be a researcher with an international reputation in bioinformatics, with a strong record of producing influential research at the interface of statistics, computational biology, genomics, and data science, and of securing research funding. Your work should advance the field, whether through methodological innovation, biological discovery, or the development of new approaches to understanding complex biological and biomedical data. You will bring experience of shaping research strategy, building productive collaborations, and exercising academic leadership. Above all, we wish to appoint someone who shares our values of intellectual curiosity, academic excellence, scholarly integrity, and a commitment to fostering a positive, supportive, and inclusive environment for all.</p>

<p>If you would like to discuss this post, please contact the Head of the Department of Statistics, Professor Frank Windmeijer, frank.windmeijer@stats.ox.ac.uk, or for information about University College please contact the Senior Tutor, Dr Andrew Bell, andrew.bell@univ.ox.ac.uk. All enquiries will be treated in strict confidence and will not form part of the selection decision.</p>

<p>The closing date for applications is 12:00 noon UK time on Monday 21 September 2026. Interviews are expected to be held in November 2026.</p>

<p>Apply here https://my.corehr.com/pls/uoxrecruit/erq_jobspec_version_4.display_form</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/3967/research-project-posts-for-csir-project-delhi</guid>
  <pubDate>Tue, 27 Aug 2013 04:31:41 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Project Posts for CSIR Project, Delhi]]></title>
  <description><![CDATA[
<p>Positions Open For Temporary Research Project Posts for CSIR Project, Delhi<br />CSIR is looking for bright young candidates to get involved in building algorithms and platforms for large biological data analyses in the areas of comparative genomics, computational workflows, disease association studies, simulating virtual organelles, etc. Anyone who fulfills the eligibility criteria mentioned below may appear for a walk-in interview on 3rd September 2013 at CSIR Headquarters, Anusandhan Bhawan, 2 Rafi Marg, Delhi – 110001.<br />you can go to link for details or download PDF</p>

<p>http://www.csir.res.in/External/Heads/aboutcsir/announcements/ProjectPost_130813.pdf</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/2560/great-place-to-study-bioinformatics-in-europe</guid>
	<pubDate>Sun, 18 Aug 2013 18:41:34 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/2560/great-place-to-study-bioinformatics-in-europe</link>
	<title><![CDATA[Great Place to Study Bioinformatics in Europe]]></title>
	<description><![CDATA[<p>Study bioinformatics is like being jack of all trade so it is important you choose where it will be good backup of computer science, and natural science infrastructure and faculty. Especially having a good teachers in computer science is indispensible.&nbsp;</p><p><strong>Few places in Europe where good (and @some places no tution fees) master bioinformatics courses and recommended are</strong>:</p><p><strong>KU Leuven, Belgium</strong></p><p><a href="http://onderwijsaanbod.kuleuven.be/opleidingen/e/CQ_50269018.htm">http://onderwijsaanbod.kuleuven.be/opleidingen/e/CQ_50269018.htm</a></p><p><strong>ETH, Zurich</strong></p><p><a href="http://www.cbb.ethz.ch/">http://www.cbb.ethz.ch/</a></p><p><strong>University of Copenhagen, Denmark</strong></p><p><a href="http://studies.ku.dk/masters/bioinformatics/">http://studies.ku.dk/masters/bioinformatics/</a></p><p><strong>University of Helsinki, Finland</strong></p><p><a href="http://www.cs.helsinki.fi/en/mbi/">http://www.cs.helsinki.fi/en/mbi/</a></p><p><strong>Stockholm University, Sweden</strong></p><p><a href="http://www.sbc.su.se/masters/">http://www.sbc.su.se/masters/</a></p><p><strong>Universities in Netherlands</strong></p><p><a href="http://www.nbic.nl/education/msc-programmes/">http://www.nbic.nl/education/msc-programmes/</a></p><p><strong>TUM , Munich Germany</strong></p><p><a href="http://www.mastersportal.eu/studies/865/bioinformatics.html">http://www.mastersportal.eu/studies/865/bioinformatics.html</a></p><p><strong>University of Bergen, Norway</strong></p><p><a href="http://www.uib.no/en/studieprogram/MAMN-INF/BI/plan">http://www.uib.no/en/studieprogram/MAMN-INF/BI/plan</a></p><p><strong>Goethe-University in Frankfurt am Main</strong></p><p><a href="http://www.uni-frankfurt.de/58444439/mabi">http://www.uni-frankfurt.de/58444439/mabi</a></p><p><strong>Other links</strong>:</p><p><a href="http://www.masterstudies.com/Masters-Degree/Bioinformatics/Europe/">http://www.masterstudies.com/Masters-Degree/Bioinformatics/Europe/</a></p><p><a href="https://studyinsweden.se/programmes/?query=bioinformatics&amp;period=ht-2016&amp;level=ma&amp;subject=natural-science&amp;university=#search">https://studyinsweden.se/programmes/?query=bioinformatics&amp;period=ht-2016&amp;level=ma&amp;subject=natural-science&amp;university=#search</a></p><p>&nbsp;</p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/4098/bioinformatics-algorithm-demonstrations-and-tutorials</guid>
	<pubDate>Thu, 29 Aug 2013 09:23:51 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/4098/bioinformatics-algorithm-demonstrations-and-tutorials</link>
	<title><![CDATA[Bioinformatics Algorithm Demonstrations and Tutorials]]></title>
	<description><![CDATA[<p>Abstract</p>
<p>This project presents demonstrations of selected computer science algorithms important in&nbsp;bioinformatics, implemented in the spreadsheet program Microsoft Excel. Spreadsheets provide an&nbsp;interesting platform for demonstration of algorithms, since various steps of the calculations can be&nbsp;exposed in a manner that is easily comprehensible to users with little programming experience. The&nbsp;algorithms demonstrated include two approaches to approximate string matching (dynamic programming&nbsp;and Shift-AND numeric approximate matching), Hierarchical Clustering (used in phylogenetic studies&nbsp;and microarray analysis of gene expression), a Naive Bayes Classifier for simulated microarray gene&nbsp;expression data, and a simple Neural Network. These demonstrations are designed to serve as&nbsp;instructional aids in bioinformatics courses.</p>
<p>Tutorial @&nbsp;http://www.cybertory.org/downloads/bae/BioinformaticsAlgorithmsInExcel.zip</p>
<p>One of the best resource for online bioinformatics learning is https://stepic.org/Bioinformatics-Algorithms-2 Enjoy the online learning.</p>
<p>Reference :&nbsp;cybertory</p>
<blockquote>
<p><span>" Please add your favourite bioinformatics algorithms and tutorial links below in the comment section, for the benefit of bioinformatics and computational biology community ".&nbsp;</span></p>
</blockquote><p>Address of the bookmark: <a href="http://www.cybertory.org/downloads/bae/BioinformaticsAlgorithmsExcelDoc.pdf" rel="nofollow">http://www.cybertory.org/downloads/bae/BioinformaticsAlgorithmsExcelDoc.pdf</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/4197/bioinformatics-course-and-lectures</guid>
	<pubDate>Tue, 03 Sep 2013 16:41:02 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/4197/bioinformatics-course-and-lectures</link>
	<title><![CDATA[Bioinformatics course and lectures]]></title>
	<description><![CDATA[<p><a href="http://openwetware.org/wiki/User:Jarle_Pahr/Bioinformatics">http://openwetware.org/wiki/User:Jarle_Pahr/Bioinformatics</a></p><p>Address of the bookmark: <a href="http://gtpb.igc.gulbenkian.pt/bicourses/index.html" rel="nofollow">http://gtpb.igc.gulbenkian.pt/bicourses/index.html</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/4162/4273%CF%80-bioinformatics-education-on-low-cost-arm-hardware</guid>
	<pubDate>Mon, 02 Sep 2013 07:02:43 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/4162/4273%CF%80-bioinformatics-education-on-low-cost-arm-hardware</link>
	<title><![CDATA[4273π: Bioinformatics education on low cost ARM hardware]]></title>
	<description><![CDATA[<p>Are you teaching bioinformatics at universities and found it complicated by typical computer classroom settings. As well as running software locally and online, students should gain experience of systems administration. Hmm don't worry there is one new OS for the rescue. 4273<em>&pi;</em>, an operating system image for Raspberry Pi based on Raspbian Linux. It provides an attractive, general-purpose computing environment, within which the course 4273&pi; Bioinformatics for Biologists is embedded.<br /><br />Though far slower than current desktop and laptop computers, the Raspberry Pi is notably faster than the Cray 1 supercomputer, a marvel of computer speed in its day. The Raspberry Pi approach includes all the benefits of the laptop approach, above, but at lower cost. In addition, the Raspberry Pi is a new and exciting computer system, which in itself can add interest to the course.<br /><br />As the Raspbian operating system, Raspberry Pi firmware and hardware and 4273&pi; Bioinformatics for Biologists teaching material develop, further releases of 4273&pi; will be made available. It is anticipated that there will be a minimum of two releases per year during the next four years.</p><p>4273<em>&pi;</em> is a means to teach bioinformatics, including systems administration tasks, to undergraduates at low cost.</p><p>Descriptive paper @ http://www.biomedcentral.com/1471-2105/14/243</p><p>Image source: BMC Bioinformatics</p><p><img src="http://www.biomedcentral.com/content/download/figures/1471-2105-14-243-1.png" alt="image" style="border: 0px; border: 0px;"></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/4211/socbin-bioinformatics-2014</guid>
  <pubDate>Tue, 03 Sep 2013 18:50:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[SocBiN Bioinformatics 2014]]></title>
  <description><![CDATA[
<p>14th annual conference in Bioinformatics</p>

<p>Date : June 10-13</p>

<p>Organizers: The Society for Bioinformatics in Northern European countries (SocBiN) and the Norwegian Bioinformatics Platform / ELIXIR.NO </p>

<p>Venue: Department of Informatics, University of Oslo, Norway</p>

<p>Topics:<br />Tools and technologies for integrative bioinformatics<br />Metagenomics<br />Comparative genomics and phylogeny<br />Post-ENCODE bioinformatics<br />Gene regulation<br />Cancer genomes<br />Marine genomics</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4409/huber-lab</guid>
  <pubDate>Mon, 09 Sep 2013 21:57:03 -0500</pubDate>
  <link></link>
  <title><![CDATA[Huber Lab]]></title>
  <description><![CDATA[
<p>The Huber group develops computational and statistical methods to design and analyse novel experimental approaches in genetics and cell biology. </p>

<p>Future projects and goals</p>

<p>Large-scale systematic maps of gene-gene and gene-environment interactions by automated phenotyping, using image analysis, machine learning, sparse model building and causal inference.<br />DNA-, RNA- and ChIP-Seq and their applications to gene expression regulation: statistical and computational foundations.<br />Cancer genomics, genomes as biomarkers, cancer phylogeny.<br />Image analysis for systems biology: measuring the dynamics of cell cycle and of cell migration of individual cells under normal conditions and many different perturbations (RNAi, drugs).</p>

<p>More @ http://www.embl.de/research/units/genome_biology/huber/index.html</p>
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