<?xml version='1.0'?><rss version="2.0" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:georss="http://www.georss.org/georss" xmlns:atom="http://www.w3.org/2005/Atom" >
<channel>
	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/28141?offset=250</link>
	<atom:link href="https://bioinformaticsonline.com/related/28141?offset=250" rel="self" type="application/rss+xml" />
	<description><![CDATA[]]></description>
	
	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/fun/view/9207/biogeek-fun</guid>
	<pubDate>Sun, 16 Mar 2014 06:33:31 -0500</pubDate>
	<link>https://bioinformaticsonline.com/fun/view/9207/biogeek-fun</link>
	<title><![CDATA[BioGeek Fun]]></title>
	<description><![CDATA[<p>1. A futuristic computational biology student was told to write "It is in my gene!!!" on the board 100 times as a punishment. here's his response -<br /><br />use warnings;<br />for ($count=1; $count &lt;=100; $count++) { print "It is in my gene!!!";}<br /><br />I guess, he is gonna to be a real biogeek. Nice try though. Smart kid.</p><p>&nbsp;</p><p>2. In some perl script I found this <br />&nbsp;. . . . . .<br />&nbsp;. . . . . .<br /># It works for me, only God understood how it is working<br />while (/(&lt;\/[^&gt;]+&gt;)|(&lt;[^&gt;]+&gt;)|(&lt;[^&gt;]+&gt;)$|([^&gt;&lt;]+)/go) {<br />&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; $startGene=$1;<br />&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; $beginChromosome=$2;<br />&nbsp;&nbsp; &nbsp;<br />. . . . . .<br />&nbsp;.. . . . . .<br />}</p><p>&nbsp;</p><p>3. One more interesting message in Perl found &hellip;. It will must tickle you bone :) <br />open(my $fh, "&lt;", "gene.txt")&nbsp;&nbsp; &nbsp;or kill " Me if you think this is a mistake :$!";<br /><br /></p><p>&nbsp;</p><p>4. From the Perl <br /><br />&nbsp; while () {&nbsp; # "The Mothership Connection is here!"<br />&nbsp;&nbsp; &nbsp;print &ldquo;$_\n&rdquo;; # Printing the offspring :)</p><p>&nbsp;</p><p>5. Perl message<br />if ($1) { print &ldquo;Just found a the error in chromosome !!!, yahoo&hellip;&rdquo;; else { &ldquo;That is not error, but mutation you moron!&rdquo;;</p><p>&nbsp;</p><p>6. One genome database curator walk in wine bar asked the bartender:<br />CREATE TABLE gene IF NOT EXISTS SexOnTheBeach;</p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/9327/jarvis%E2%80%99-laboratory</guid>
  <pubDate>Tue, 18 Mar 2014 18:53:47 -0500</pubDate>
  <link></link>
  <title><![CDATA[Jarvis’ laboratory]]></title>
  <description><![CDATA[
<p>Dr. Jarvis’ laboratory studies the neurobiology of vocal communication. We want to know how the brain generates, perceives, and learns behavior. We use vocal communication as a model behavior. Emphasis is placed on the molecular pathways involved in the perception and production of learned vocalizations. We use an integrative approach that combines behavioral, anatomical, electrophysiological, and molecular biological techniques. The main animal model used is songbirds, one of the few vertebrate groups that evolved the ability to learn vocalizations. The overall goal of the research is to advance knowledge of the neural mechanisms for vocal learning and basic mechanisms of brain function.</p>

<p>Lab page: http://jarvislab.net/</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/42236/bioinformatics-focused-postdoctoral-fellow</guid>
  <pubDate>Fri, 23 Oct 2020 05:52:52 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics-focused postdoctoral fellow]]></title>
  <description><![CDATA[
<p>Jason Thomas Ladner currently recruiting for a bioinformatics-focused postdoctoral<br />fellow to join the group at the Pathogen and Microbiome Institute,<br />Northern Arizona University (http://www7.nau.edu/ladnerlab/). This<br />will be a multi-year, NIH-funded position focused on the development and<br />utilization of a novel platform for highly multiplexed antiviral serology,<br />which utilizes high-throughput sequencing technology.</p>

<p>To apply:<br />https://hr.peoplesoft.nau.edu/psp/ph92prta/EMPLOYEE/HRMS/c/HRS_HRAM.HRS_APP_SCHJOB.GBL?Page=HRS_APP_JBPST&amp;Action=U&amp;FOCUS=Applicant&amp;SiteId=1&amp;JobOpeningId=604999&amp;PostingSeq=1</p>

<p>For more information, feel free to contact me: jason.ladner@nau.edu</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/9518/professor-and-associate-professors-pb-iv-assistant-professors-pb-iii-job-at-iiit-allahabad</guid>
  <pubDate>Mon, 31 Mar 2014 08:09:07 -0500</pubDate>
  <link></link>
  <title><![CDATA[Professor and Associate Professors (PB-IV) Assistant Professors (PB-III) Job at IIIT, Allahabad]]></title>
  <description><![CDATA[
<p>Indian Institute of Information Technology, Allahabad <br />Devghat, Jhalwa, Allahabad – 211012, Uttar Pradesh, India <br />E-mail: contact@iiita.ac.in, faculty.applications@iiita.ac.in <br />Web: www.iiita.ac.in Phone : 0532-2922031/27/67 </p>

<p>Applications are invited on prescribed format along with self attested copies of the certificates for Faculty Positions in the following areas:  <br />Sciences – Systems Biology, Computer Aided Drug Designing, Statistics, Applied Mathematics, Applied Physics. BioMedical Engineering – BioMechanics, BioMedical Instrumentation.  </p>

<p> Last Date : May 10, 2014 </p>

<p>Details are available on our website : http://www.iiita.ac.in</p>

<p>http://www.iiita.ac.in/downloads/announcements/uploads/FACULTY_Advertisement_NO-FS-01_2014130.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/42552/bioinformatics-workbook</guid>
	<pubDate>Tue, 05 Jan 2021 22:42:32 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42552/bioinformatics-workbook</link>
	<title><![CDATA[bioinformatics workbook]]></title>
	<description><![CDATA[<p><span>This books assumes that the reader has some knowledge of biology and basic understanding of the Unix command line. However, for the beginner, the appendix contains introductory material and tips/tricks for common bioinformatic problems, that is referred to for more information throughout the book.</span></p>
<p>https://bioinformaticsworkbook.org/</p><p>Address of the bookmark: <a href="https://bioinformaticsworkbook.org/" rel="nofollow">https://bioinformaticsworkbook.org/</a></p>]]></description>
	<dc:creator>biogeek</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/9639/find-certain-filesdocuments-in-linux-os</guid>
	<pubDate>Sun, 06 Apr 2014 23:56:18 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/9639/find-certain-filesdocuments-in-linux-os</link>
	<title><![CDATA[Find certain files/documents in Linux OS]]></title>
	<description><![CDATA[<p>As bioinformatician I know the fact that we usually handle the large dataset and lost in the huge numbers of files and folders. In order to search the missing file a strong search command is required. The Linux Find Command is one of the most important and much used command in Linux sytems. Find command used to search and locate list of files and directories based on conditions you specify for files that match the arguments. Find can be used in variety of conditions like you can find files by permissions, users, groups, file type, date, size and other possible criteria.<br /><br />Through this article we are sharing our day-to-day Linux find command experience and its usage in the form of examples. In this article we will show you the most used 35 Find Commands examples in Linux. We have divided the section into Five parts from basic to advance usage of find command.</p><p><strong>Part I &ndash; Basic Find Commands for Finding Files with Names</strong><br />1. Find Files Using Name in Current Directory<br /><br />Find all the files whose name is gene.txt in a current working directory.<br /><br /># find . -name gene.txt<br /><br />./gene.txt<br /><br />2. Find Files Under Home Directory<br /><br />Find all the files under /home directory with name gene.txt.<br /><br /># find /home -name gene.txt<br /><br />/home/gene.txt<br /><br />3. Find Files Using Name and Ignoring Case<br /><br />Find all the files whose name is gene.txt and contains both capital and small letters in /home directory.<br /><br /># find /home -iname gene.txt<br /><br />./gene.txt<br />./Gene.txt<br /><br />4. Find Directories Using Name<br /><br />Find all directories whose name is Gene in / directory.<br /><br /># find / -type d -name Gene<br /><br />/Gene<br /><br />5. Find fasta Files Using Name<br /><br />Find all php files whose name is gene.fasta in a current working directory.<br /><br /># find . -type f -name gene.fasta<br /><br />./gene.fasta<br /><br />6. Find all PHP Files in Directory<br /><br />Find all fasta files in a directory.<br /><br /># find . -type f -name "*.fasta"<br /><br />./gene.fasta<br />./cancer.fasta<br />./allgene.fasta<br /><br /><strong>Part II &ndash; Find Files Based on their Permissions</strong><br />7. Find Files With 777 Permissions<br /><br />Find all the files whose permissions are 777.<br /><br /># find . -type f -perm 0777 -print<br /><br />8. Find Files Without 777 Permissions<br /><br />Find all the files without permission 777.<br /><br /># find / -type f ! -perm 777<br /><br />9. Find SGID Files with 644 Permissions<br /><br />Find all the SGID bit files whose permissions set to 644.<br /><br /># find / -perm 2644<br /><br />10. Find Sticky Bit Files with 551 Permissions<br /><br />Find all the Sticky Bit set files whose permission are 551.<br /><br /># find / -perm 1551<br /><br />11. Find SUID Files<br /><br />Find all SUID set files.<br /><br /># find / -perm /u=s<br /><br />12. Find SGID Files<br /><br />Find all SGID set files.<br /><br /># find / -perm /g+s<br /><br />13. Find Read Only Files<br /><br />Find all Read Only files.<br /><br /># find / -perm /u=r<br /><br />14. Find Executable Files<br /><br />Find all Executable files.<br /><br /># find / -perm /a=x<br /><br />15. Find Files with 777 Permissions and Chmod to 644<br /><br />Find all 777 permission files and use chmod command to set permissions to 644.<br /><br /># find / -type f -perm 0777 -print -exec chmod 644 {} \;<br /><br />16. Find Directories with 777 Permissions and Chmod to 755<br /><br />Find all 777 permission directories and use chmod command to set permissions to 755.<br /><br /># find / -type d -perm 777 -print -exec chmod 755 {} \;<br /><br />17. Find and remove single File<br /><br />To find a single file called gene.txt and remove it.<br /><br /># find . -type f -name "gene.txt" -exec rm -f {} \;<br /><br />18. Find and remove Multiple File<br /><br />To find and remove multiple files such as .fa or .gb, then use.<br /><br /># find . -type f -name "*.fa" -exec rm -f {} \;<br /><br />OR<br /><br /># find . -type f -name "*.gb" -exec rm -f {} \;<br /><br />19. Find all Empty Files<br /><br />To file all empty files under certain path.<br /><br /># find /tmp -type f -empty<br /><br />20. Find all Empty Directories<br /><br />To file all empty directories under certain path.<br /><br /># find /tmp -type d -empty<br /><br />21. File all Hidden Files<br /><br />To find all hidden files, use below command.<br /><br /># find /tmp -type f -name ".*"<br /><br /><strong>Part III &ndash; Search Files Based On Owners and Groups</strong><br />22. Find Single File Based on User<br /><br />To find all or single file called gene.txt under / root directory of owner root.<br /><br /># find / -user root -name gene.txt<br /><br />23. Find all Files Based on User<br /><br />To find all files that belongs to user Rahul under /home directory.<br /><br /># find /home -user rahul<br /><br />24. Find all Files Based on Group<br /><br />To find all files that belongs to group Developer under /home directory.<br /><br /># find /home -group developer<br /><br />25. Find Particular Files of User<br /><br />To find all .txt files of user Rahul under /home directory.<br /><br /># find /home -user rahul -iname "*.txt"<br /><br /><strong>Part IV &ndash; Find Files and Directories Based on Date and Time</strong><br />26. Find Last 50 Days Modified Files<br /><br />To find all the files which are modified 50 days back.<br /><br /># find / -mtime 50<br /><br />27. Find Last 50 Days Accessed Files<br /><br />To find all the files which are accessed 50 days back.<br /><br /># find / -atime 50<br /><br />28. Find Last 50-100 Days Modified Files<br /><br />To find all the files which are modified more than 50 days back and less than 100 days.<br /><br /># find / -mtime +50 &ndash;mtime -100<br /><br />29. Find Changed Files in Last 1 Hour<br /><br />To find all the files which are changed in last 1 hour.<br /><br /># find / -cmin -60<br /><br />30. Find Modified Files in Last 1 Hour<br /><br />To find all the files which are modified in last 1 hour.<br /><br /># find / -mmin -60<br /><br />31. Find Accessed Files in Last 1 Hour<br /><br />To find all the files which are accessed in last 1 hour.<br /><br /># find / -amin -60<br /><br /><strong>Part V &ndash; Find Files and Directories Based on Size</strong><br />32. Find 50MB Files<br /><br />To find all 50MB files, use.<br /><br /># find / -size 50M<br /><br />33. Find Size between 50MB &ndash; 100MB<br /><br />To find all the files which are greater than 50MB and less than 100MB.<br /><br /># find / -size +50M -size -100M<br /><br />34. Find and Delete 100MB Files<br /><br />To find all 100MB files and delete them using one single command.<br /><br /># find / -size +100M -exec rm -rf {} \;<br /><br />35. Find Specific Files and Delete<br /><br />Find all .gb files with more than 10MB and delete them using one single command.<br /><br /># find / -type f -name *.gb -size +10M -exec rm {} \;</p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43042/bioinformatics-in-thailand</guid>
	<pubDate>Wed, 28 Apr 2021 02:04:56 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43042/bioinformatics-in-thailand</link>
	<title><![CDATA[Bioinformatics in Thailand !]]></title>
	<description><![CDATA[<p>Our international PhD and master programs are designed for students who desire focused training in the elements of biology, computer science, and information technology needed for a successful career in the exciting new discipline of Bioinformatics &amp; Systems Biology. Students in our program will receive comprehensive training in omics analysis, database design and management, software engineering and programming (including web-based development), simulation techniques and modeling, and data integration. Each student will apply their skills to a practical project, where they will design and implement a solution to a real-world problem under the guidance of an experienced mentor in industry or academia.</p>
<p><strong>https://bioinformatics.kmutt.ac.th/about.html</strong></p>
<p>Duangrudee Tanramluk (Ajarn Wi) uses computational biology and machine learning to tackle the key to drug design problems via MANORAA webserver.</p>
<p><strong>https://mb.mahidol.ac.th/en/bioinformatics/</strong></p>
<p><strong>https://graduate.mahidol.ac.th/inter/</strong></p>
<p>This&nbsp;international&nbsp;Doctorate programme is designed to further broaden students&rsquo; knowledge in Bioinformatics and Molecular Biology to their maximum capability.&nbsp;</p>
<p><strong>http://www.mbb.psu.ac.th/programmes/phd</strong></p>
<p>Ph.D. program in Bioinformatics and Computational Biology is a joint effort of the Faculty of Science and Faculty of Medicine, Chulalongkorn University. The program has study plans for both applicants who hold a bachelor&rsquo;s degree and applicants who hold a master&rsquo;s degree in any related fields of study.</p>
<p><strong>http://www.bioinfo.sc.chula.ac.th/ph-d-program-specialization/</strong></p>
<p>Additional detail&nbsp;</p>
<p><strong>https://www.biotec.or.th/en/index.php/research/research-units/genome-technology-research-unit</strong></p>
<p><strong>https://tbrcnetwork.org/labtbrc/index.php/bioinformatics-and-chemoinformatics/</strong></p>
<p><strong>https://genomicsthailand.com/Genomic/home</strong></p><p>Address of the bookmark: <a href="https://bioinformatics.kmutt.ac.th/" rel="nofollow">https://bioinformatics.kmutt.ac.th/</a></p>]]></description>
	<dc:creator>Shruti Paniwala</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/9868/raghavas-group</guid>
  <pubDate>Tue, 15 Apr 2014 23:59:48 -0500</pubDate>
  <link></link>
  <title><![CDATA[Raghava's Group]]></title>
  <description><![CDATA[
<p>Raghava's group is known for developing open source software or web servers. Group have developed large number of web-based services.</p>

<p>Find more at http://www.imtech.res.in/raghava/</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43284/tech-and-bioinformatics-roles-at-basepaws</guid>
  <pubDate>Wed, 18 Aug 2021 23:34:25 -0500</pubDate>
  <link></link>
  <title><![CDATA[Tech and Bioinformatics roles at Basepaws]]></title>
  <description><![CDATA[
<p>Basepaws is an LA-based pet genomics company, quickly growing and focused on feline and canine at-home genetic and biome tests, along with many other projects and products in the works. Thank you for taking a look!</p>

<p>Bioinformatics : https://www.linkedin.com/jobs/view/2681785372/</p>

<p>Engineer: https://www.linkedin.com/jobs/view/2681796993/</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/10127/assistant-professor-at-sardar-patel-university</guid>
  <pubDate>Mon, 21 Apr 2014 21:03:55 -0500</pubDate>
  <link></link>
  <title><![CDATA[Assistant Professor at SARDAR PATEL UNIVERSITY]]></title>
  <description><![CDATA[
<p>SARDAR PATEL UNIVERSITY<br />Centre for Interdisciplinary Studies in Science and Technology</p>

<p>No.: SPU/CISST/Advt./2014-15/519</p>

<p>ADVERTISEMENT for Teaching Positions (Contractual)</p>

<p>Applications for the following Contractual Teaching Position are invited for Centre for Interdisciplinary Studies in Science and Technology (CISST), Sardar Patel University:</p>

<p>2. Assistant Professor (ONE) (Contractual)</p>

<p>For the subject of Bioinformatics</p>

<p>Qualifications:</p>

<p>(I) Good academic record as defined by the concerned university with at least 55 % marks (or an equivalent grade in a point scale wherever grading system is followed) at the Master’s level</p>

<p>(II) Ph.D. degree in the concerned subject or in a relevant interdisciplinary subject<br />from an Indian University or NET/SLET clearance Contractual appointment carries a total Fixed Emoluments of Rs. 30,000/- p.m without any assurance of permanent Positions and related benefits.</p>

<p>An Application Form in prescribed Performa, available on University Website: www.spuvvn.edu should be filled in completely in Twelve Copies with self attested copies of certificates of qualifications and experience. Only one copy of each mark sheet be attached with the first copy of the application form. All 12 (Twelve) Application forms should be sent to Registrar’s office along with Demand Draft of Application form fee of Rs. 250/- (Non-refundable) in favour of “REGISTRAR, SARDAR PATEL UNIVERSITY, VALLABH VIDYANAGAR”. The S.C. and S.T. category candidates need not to pay Application fee.</p>

<p>Applicants who are in service should apply through their present employers. Candidates called for interview shall be required to attend at their own cost.</p>

<p>In absence of suitable candidate, the University may relax the eligibility criteria, for conditional appointment.</p>

<p>The last date of receipt of application by the University is 30th April, 2014</p>

<p>Advertisement: www.spuvvn.edu/careers/CISST%20Advt.%20April%202014.pdf</p>
]]></description>
</item>

</channel>
</rss>