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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/28164?offset=970</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/31278/metapred2cs</guid>
	<pubDate>Fri, 03 Mar 2017 05:15:07 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/31278/metapred2cs</link>
	<title><![CDATA[MetaPred2CS]]></title>
	<description><![CDATA[<p style="text-align: justify;"><strong>MetaPred2CS Web server&nbsp;</strong>is a meta-predictor based on&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/17160063">Support Vector Machine (SVM)</a>&nbsp;that combines 6 individual sequence based protein-protein interaction prediction methods to predict&nbsp;<strong>prokaryotic two-component system&nbsp;</strong>protein-protein interactions (PPIs). The methods implemented in MetaPred2CS are 2 co-evolutionary methods:&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/11933068">in-silico two hybrid (i2h)</a>&nbsp;and&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/11707606">mirror tree (MT)</a>&nbsp;methods and 4 genomics context based methods:&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/15947018">phylogenetic profiling (PP)</a>,&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/10573422">gene fusion (GF)</a>,&nbsp;<a href="http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.0030043">gene neighbourhood (GN)</a>&nbsp;and and&nbsp;<a href="http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.0030043">gene operon methods (GO)</a>.</p>
<p>&nbsp;http://metapred2cs.ibers.aber.ac.uk/</p><p>Address of the bookmark: <a href="https://github.com/martinjvickers/MetaPred2CS" rel="nofollow">https://github.com/martinjvickers/MetaPred2CS</a></p>]]></description>
	<dc:creator>Manisha Mishra</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/24666/bioinformatics-faculty-at-bharathidasan-university</guid>
  <pubDate>Sat, 26 Sep 2015 20:34:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Faculty at BHARATHIDASAN UNIVERSITY]]></title>
  <description><![CDATA[
<p>BHARATHIDASAN UNIVERSITY</p>

<p>(Reaccredited by NAAC with ‘A’ grade)</p>

<p>TIRUCHIRAPPALLI - 620 024</p>

<p>I N V I T E S</p>

<p>APPLICATIONS FOR FACULTY POSITIONS UNDER UGC XII PLAN CREATED POSTS ON CONTRACTUAL BASIS TILL 31.03.2017 IN THE FOLLOWING UNIVERSITY DEPARTMENTS. (Notification No. 31300 /H2/2015, Dt.: 18.09.2015)</p>

<p>ASSISTANT PROFESSOR</p>

<p>1. Bio-Informatics ONE (MBC)</p>

<p>2. Bio-Chemistry ONE G.T.(W)DW</p>

<p>Consolidated Pay of Rs.45,000/- p.m.</p>

<p>Qualification : As per UGC/AICTE/NCTE norms</p>

<p>Application along with other details including specialization can be downloaded from the University website www.bdu.ac.in</p>

<p>LAST DATE FOR RECEIPT OF FILLED IN APPLICATION IS 07.10.2015 BY 5.00 P.M.</p>

<p>More Info : www.bdu.ac.in/adv/UGC_XII_Plan_Contract_Positions.pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27253/ra-bioinformatics-at-jnu-delhi</guid>
  <pubDate>Tue, 10 May 2016 01:50:38 -0500</pubDate>
  <link></link>
  <title><![CDATA[R.A Bioinformatics at JNU, Delhi]]></title>
  <description><![CDATA[
<p>R.A Jobs opportunity in Jawaharlal Nehru University (JNU) on purely temporary basis</p>

<p>Project Title : "Structural and functional characterization of serine biosynthetic pathway enzymes from Entamoeba histolytica"</p>

<p>No. of Post : 01</p>

<p>Qualification : Ph.D in any computational biology / bioinformatics</p>

<p>Desirable : 1. Experience with docking, simulations and structural biology with proof of publications is preferred. 2. National Eligibility Test cleared [CSIR/UGC] candidate is preferred.</p>

<p>Salary : According to CSIR rules<br />How to apply</p>

<p>The application on plain paper indicating name, date of birth/age, address, essential/technical/professional qualifications. experience, list of publications should reach The Prof. S. Gourinath, Principal Investigator, [Project Director], School of Life Sciences, Jawaharlal Nehru University, New Delhi-110067, on or before 23rd May 2016.</p>

<p>More at http://www.jnu.ac.in/Career/currentjobs.htm</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25306/research-trainees-recruitment-in-national-agri-food-biotechnology-institute-nabi</guid>
  <pubDate>Sun, 29 Nov 2015 02:47:28 -0600</pubDate>
  <link></link>
  <title><![CDATA[Research Trainees recruitment in National Agri-Food Biotechnology Institute (NABI)]]></title>
  <description><![CDATA[
<p>Research Trainees recruitment in National Agri-Food Biotechnology Institute (NABI)</p>

<p>Eligibility : Pursuing final year of M.Sc./M.Tech.</p>

<p>Subject category for training : I. Agricultural biotechnology II. Computational biology and bioinformatics III. Food Science &amp; Technology IV. Nutrition Science &amp; Technology</p>

<p>Duration of Training : 6 months (January to June 2016)</p>

<p>Selection Procedure : Through screening and selection based on merit, experience, and expression of interest submitted by candidates <br />How to apply</p>

<p>The last date of application to reach NABI latest by November 30, 2015 by 5:30 PM </p>

<p>More at http://www.nabi.res.in/Training.aspx</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25251/m-d-university-rohtak-is-looking-for-the-post-of-research-associate</guid>
  <pubDate>Fri, 13 Nov 2015 02:56:48 -0600</pubDate>
  <link></link>
  <title><![CDATA[M. D. University, Rohtak is looking for the post of Research Associate]]></title>
  <description><![CDATA[
<p>M. D. University, Rohtak - Rohtak, Haryana<br />M. D. University, Rohtak is looking vacancies for the post of Research Associate</p>

<p>Project entitled: "Establish of Bioinformatics Facility for biology teaching through bioinformatics"</p>

<p>Name of post: Research Associate /Trainees</p>

<p>Number of post: 03</p>

<p>Educational Qualification and Experience: Candidates should have Ph D in relevant subjects with experience in handling computational biology resources and software</p>

<p>Selection mode: Walk in interview</p>

<p>How to apply?<br />Interested and eligible candidates may appear for a walk-in interview on 14th November 2015 at 11.00 am, in the office of Director, Centre for Bioinformatics along with CV and attested copies of all testimonials and additional qualifications.</p>

<p>Recruitment reference: http://www.mdurohtak.ac.in/pdf/career/adv_research_asso_dbt_bioinfo.pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25253/scientist-e-ii-or-f-in-bioinformatics-computational-biology-at-rajiv-gandhi-centre-for-biotechnology</guid>
  <pubDate>Fri, 13 Nov 2015 03:10:32 -0600</pubDate>
  <link></link>
  <title><![CDATA[Scientist E-II or F in Bioinformatics &amp; Computational Biology at Rajiv Gandhi Centre for Biotechnology]]></title>
  <description><![CDATA[
<p>Advt. No.RGCB Advt./SCI 2015/1</p>

<p>Rajiv Gandhi Centre for Biotechnology (RGCB) invites applications for the following three faculty scientist positions:</p>

<p>    Scientist G in any of the following disciplines of disease biology: Cancer Research/Cardiovascular Biology/Diabetes Biology/Pathogen Biology<br />    Scientist E-II or F in Bioinformatics &amp; Computational Biology<br />    Scientist E-I or E-II in Cancer Research with special emphasis on Human Papillomavirus Research</p>

<p>More at http://rgcb.res.in/wp-content/uploads/2015/11/APPLICATION-FORMAT-FOR-SCIENTISTS.docx</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26587/last</guid>
	<pubDate>Wed, 09 Mar 2016 14:27:01 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26587/last</link>
	<title><![CDATA[LAST]]></title>
	<description><![CDATA[<p style="text-align: center;"><img src="http://last.cbrc.jp/lastwebfig.png" alt="sketch of  similar regions in sequences" style="border: 0px;"></p>
<p>LAST can:</p>
<ul>
<li>Handle <strong>big</strong> sequence data, e.g:
<ul>
<li>Compare two vertebrate genomes</li>
<li>Align billions of DNA reads to a genome</li>
</ul>
</li>
<li>Indicate the <a href="http://lastweb.cbrc.jp/about.html">reliability</a> of each aligned column.</li>
<li>Use sequence quality data <a href="http://nar.oxfordjournals.org/content/38/7/e100.abstract">properly</a>.</li>
<li>Compare DNA to proteins, with frameshifts.</li>
<li>Compare PSSMs to sequences</li>
<li>Calculate the likelihood of chance similarities between random sequences.</li>
<li>Do split and spliced alignment.</li>
<li><a href="http://last.cbrc.jp/doc/last-train.html">Train</a> alignment parameters for unusual kinds of sequence (e.g. nanopore).</li>
</ul><p>Address of the bookmark: <a href="http://last.cbrc.jp/" rel="nofollow">http://last.cbrc.jp/</a></p>]]></description>
	<dc:creator>Archana Malhotra</dc:creator>
</item>

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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25308/traineeship-at-biomedical-informatics-centre-pgimer-chandigarh</guid>
  <pubDate>Sun, 29 Nov 2015 03:04:27 -0600</pubDate>
  <link></link>
  <title><![CDATA[Traineeship at Biomedical Informatics Centre  PGIMER  Chandigarh]]></title>
  <description><![CDATA[
<p>Biomedical Informatics Centre</p>

<p>PGIMER</p>

<p>Chandigarh</p>

<p>invites application for a project dissertation program for students who have completed their first year of M.Sc. in Bioinformatics.</p>

<p>This is an exciting opportunity for Master's students to train in modern methods in Bioinformatics. The duration of the training will be four to six months, starting from January 2016.</p>

<p>Education: Pursuing M.Sc. Bioinformatics</p>

<p>Essential: Post graduate applicants should have completed their first year and should be in the third semester or first half of the second year.</p>

<p>Only students who are willing to spend a minimum period of 4 months to a maximum of six months, without any break, would be eligible for the program.</p>

<p>How to Apply: Candidates interested in the above project dissertation program should apply online. Send your CV, Scanned copy of letter of recommendation from Head of Institution along with Registration form in the given format should be sent to: info@bicpgi.org</p>

<p>Please mention clearly “Project dissertation &amp; your Name” in the Subject.</p>

<p>The last date for application is December 23, 2015</p>

<p>Note: Selected candidates may please note that the program is free of cost and would not provide any financial aid for transport and stay. Name of the selected candidates would be posted on the centre website by December 31, 2015.</p>

<p>Incomplete applications will be rejected.</p>

<p>For more information visit our website: http://bic-pgi.org/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25302/ra-bioinformatics-at-jamia-hamdard</guid>
  <pubDate>Sat, 28 Nov 2015 03:37:36 -0600</pubDate>
  <link></link>
  <title><![CDATA[RA Bioinformatics at Jamia Hamdard]]></title>
  <description><![CDATA[
<p>Research Associate, Bioinformatics Facility<br />Jamia Hamdard - New Delhi, Delhi<br />Research Associate, Bioinformatics Facility, Jamia Hamdard.<br />Emoluments: Rs. 22,000 + HRA 30%<br />Qualification: PhD or equivalent or having 3 years of research, teaching and design and development experience after M. Pharm./M.VSc./M.E./M.Tech. PhD in life sciences and related areas with experience in Bioinformatics may apply. Company Info.<br />Jamia Hamdard</p>

<p>Jamia Hamdard New Delhi - 110062 Additional Information States &amp; U.T State &amp; Union Territories Delhi How To Apply Apply Details<br />Last date of application: December 5, 2015 Web/Notification URL http://www.jamiahamdard.ac.in/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/26569/genome-stability-laboratory</guid>
  <pubDate>Mon, 07 Mar 2016 04:16:32 -0600</pubDate>
  <link></link>
  <title><![CDATA[Genome Stability Laboratory]]></title>
  <description><![CDATA[
<p>The bakers yeast, Saccharomyces cerevisiae is an ideal model organism to understand mechanisms of meiotic chromosome segregation. In S. cerevisiae and in mammals, the majority of meiotic crossovers are formed through a highly conserved MSH4p-MSH5p, MLH1p-MLH3p dependent pathway. We are interested in charactering the role of these complexes in crossover formation and distribution among all homolog pairs. Errors in this process are linked to congenital birth defects in humans such as Down's syndrome.Our laboratory is also interested in understanding the effect of genetic background on mutation rate variation using S. cerevisiae as a model. These studies are relevant for understanding cancer progression, genome evolution and architecture. We use high- throughput genomic methods as well as classical genetics to achieve these aims. </p>

<p>More at http://faculty.iisertvm.ac.in/~nishantkt/index.html</p>
]]></description>
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