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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/28937?offset=540</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/39884/retrieving-taxonomic-information-with-r</guid>
	<pubDate>Thu, 29 Aug 2019 01:38:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/39884/retrieving-taxonomic-information-with-r</link>
	<title><![CDATA[Retrieving Taxonomic Information with R]]></title>
	<description><![CDATA[<p>This vignette will introduce users to the retrieval of taxonomic information with&nbsp;<code>myTAI</code>. The&nbsp;<code>taxonomy()</code>&nbsp;function implemented in&nbsp;<code>myTAI</code>&nbsp;relies on the powerful package&nbsp;<a href="https://github.com/ropensci/taxize">taxize</a>. Nevertheless, taxonomic information retrieval has been customized for the&nbsp;<code>myTAI</code>&nbsp;standard and for organism specific information retrieval.</p>
<p>Specifically, the&nbsp;<code>taxonomy()</code>&nbsp;function implemented in&nbsp;<code>myTAI</code>&nbsp;can be used to classify genomes according to phylogenetic classification into Phylostrata (Phylostratigraphy) or to retrieve species specific taxonomic information when performing Divergence Stratigraphy (see&nbsp;<a href="https://cran.r-project.org/web/packages/myTAI/vignettes/Introduction.html">Introduction</a>&nbsp;for details).</p><p>Address of the bookmark: <a href="https://cran.r-project.org/web/packages/myTAI/vignettes/Taxonomy.html" rel="nofollow">https://cran.r-project.org/web/packages/myTAI/vignettes/Taxonomy.html</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/22068/binc-examination-2015</guid>
	<pubDate>Fri, 17 Apr 2015 03:34:28 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/22068/binc-examination-2015</link>
	<title><![CDATA[BINC examination 2015 !!!]]></title>
	<description><![CDATA[<p>BioInformatics National Certification (BINC) Examination 2015 organized by Department of Biotechnology, Government of India, New Delhi Pondicherry University, Puducherry</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/22068" length="281577" type="application/pdf" />
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/40463/%E2%80%98dockr%E2%80%99-the-r-container</guid>
	<pubDate>Mon, 23 Dec 2019 09:56:49 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/40463/%E2%80%98dockr%E2%80%99-the-r-container</link>
	<title><![CDATA[‘dockr’: the R container]]></title>
	<description><![CDATA[<p><code>dockr</code> 0.8.6 is now available on CRAN. <code>dockr</code> is a minimal toolkit to build a lightweight Docker container image for your R package, in which the package itself is available. The Docker image seeks to mirror your R session as close as possible with respect to R specific dependencies. Both dependencies on CRAN R packages as well as local non-CRAN R packages will be included in the Docker container image.</p>
<p>If you want to know, how Docker works, and why you should consider using Docker, please take a look at the <a href="https://www.docker.com/why-docker" target="_blank">Docker website</a>.</p><p>Address of the bookmark: <a href="https://www.docker.com/why-docker" rel="nofollow">https://www.docker.com/why-docker</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22234/national-institute-of-biologicals-recruitment-2015</guid>
  <pubDate>Mon, 27 Apr 2015 19:44:45 -0500</pubDate>
  <link></link>
  <title><![CDATA[National Institute of Biologicals Recruitment 2015]]></title>
  <description><![CDATA[
<p>National Institute of Biologicals (NIB), Noida<br />Job Code: 260415(04)Y</p>

<p>National Institute of Biologicals (NIB), Noida invites applications to recruit on vacant posts of Scientist, Training Officer, Administrative Assistant, Stenographer, Junior Engineer, Computer Operator etc. Applications against these Government Jobs can be submitted on or before 01 July 2015.</p>

<p>NIB Vacancy 2015 Details<br />1. Scientist Grade III – 06<br />Qualification: PG degree in the concern field.<br />Age Limit: 35 Years</p>

<p>2. Junior Scientist – 07<br />Qualification: M.Sc. in Microbiology / Clinical Microbiology / Biotechnology/ Bioinformatics/ Biochemistry/Bacteriology/Pharmacology/ Serology / Molecular Biology/Physiology from any recognized University with at least 60% marks.<br />Age Limit: 30 Years</p>

<p>How to Apply: Duly filled-in applications in prescribed application format along with copies of required documents should be reach to: Administrative Officer, National Institute of Biologicals (Ministry of Health &amp; Family Welfare), A-32, Sector-62, Institutional Area, Noida-201309. Click here to obtain application form.</p>

<p>The Last Date to apply to NIB Job is 01 July 2015.</p>

<p>Click here to view details http://nib.gov.in/Advt%20%20%2824.04.2015%29.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41169/instructions-for-creating-your-own-r-package</guid>
	<pubDate>Wed, 19 Feb 2020 01:22:48 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41169/instructions-for-creating-your-own-r-package</link>
	<title><![CDATA[Instructions for Creating Your Own R Package]]></title>
	<description><![CDATA[<p>The following is a step-by-step guide to creating your own R package.&nbsp; Even beyond this course, youmay find this useful for storing functions you create for your own research or for editing existingR packages to suit your needs.</p>
<p>This guide contains three different sets of instructions.&nbsp; If you use RStudio, you can follow the &ldquo;Ba-sic Instructions&rdquo; in Section 2 which involve using RStudio&rsquo;s interface.&nbsp; </p><p>Address of the bookmark: <a href="http://web.mit.edu/insong/www/pdf/rpackage_instructions.pdf" rel="nofollow">http://web.mit.edu/insong/www/pdf/rpackage_instructions.pdf</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22429/walk-ins-for-jrf-ans-srf-post-in-nirrh-mumbai</guid>
  <pubDate>Thu, 28 May 2015 19:04:57 -0500</pubDate>
  <link></link>
  <title><![CDATA[Walk-ins for JRF ans SRF post in NIRRH, Mumbai]]></title>
  <description><![CDATA[
<p>Title of project- "EXPLORING THE HINGE AND TRANSMEMBRANE REGION OF HUMAN FSHR FOR DESIGN OF SMALL MOLECULE AND PEPTIDOMIMETIC MODULATORS"<br />Name of the Post- Junior Research Fellow<br />No. of vacancy- One<br />Stipend- Rs. 25000/ +30% HRA<br />Essential qualification- Candidate should be Post Graduate Degree in Life Sciences / Bioinformatics /Pharmacology/ Chemistry or any other relevant area of Biology or Graduate Degree in Professional Course with NET qualification or Post Graduate Degree in Professional Course.<br />Desirable- Candidate with Good knowledge of protein structures, docking, MD simulations will be preferred.<br />Age Limit- Not exceeding 28 Years<br />Duration of project- Upto May 2018</p>

<p>Title of project- "Analysis of the structures of known antimicrobial peptides using machine learning algorithms and molecular dynamics simulations".<br />Name of the Post- Senior Research Fellow<br />No. of vacancy- One<br />Stipend- Rs. 14000/ +30% HRA<br />Essential qualification- Candidate should be having M.Sc. degree in Life Sciences / Bioinformatics / Pharmacology/ Chemistry or any other relevant area of Biology and 2 years of research experience.<br />Desirable- Candidate with Good knowledge of protein structures, docking, MD simulations will be preferred.<br />Age Limit- Not exceeding 35 Years<br />Duration of project- Upto April 2016<br />How to Apply- Interested candidates can download the application form from below mentioned link- http://www.nirrh.res.in/links/BiodataForm.pdf<br />Candidate must bring the filled up application form along with all the relevant documents in original and one set of attested photocopies of the same and one passport size recent colour photograph.</p>

<p>Ref. - http://www.nirrh.res.in/links/job_jrf-srf.htm</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/42012/phewas-r-package-is-designed-to-provide-an-accessible-interface-to-the-phenome-wide-association-study</guid>
	<pubDate>Thu, 30 Jul 2020 22:06:37 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42012/phewas-r-package-is-designed-to-provide-an-accessible-interface-to-the-phenome-wide-association-study</link>
	<title><![CDATA[PheWAS: R package is designed to provide an accessible interface to the phenome wide association study]]></title>
	<description><![CDATA[<p>The PheWAS R package is designed to provide an accessible interface to the phenome wide association study. For a description of the methods available and some simple examples, please see the&nbsp;<a href="https://github.com/PheWAS/PheWAS/blob/master/inst/doc/PheWAS-package.pdf?raw=true">package vignette</a>&nbsp;or the R documentation. For installation help, see below. ##Installing the PheWAS Package The PheWAS package can be installed using the devtools package. The following code when executed in R will get you started:</p>
<pre><code>install.packages("devtools")
#It may be necessary to install required as not all package dependencies are installed by devtools:
install.packages(c("dplyr","tidyr","ggplot2","MASS","meta","ggrepel","DT"))
devtools::install_github("PheWAS/PheWAS")
library(PheWAS)</code></pre><p>Address of the bookmark: <a href="https://github.com/PheWAS/PheWAS" rel="nofollow">https://github.com/PheWAS/PheWAS</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22286/jrf-bioinformatics-pune-university</guid>
  <pubDate>Wed, 06 May 2015 06:21:09 -0500</pubDate>
  <link></link>
  <title><![CDATA[JRF Bioinformatics @ Pune University]]></title>
  <description><![CDATA[
<p>Pune University is inviting applications from indian citizens for recruiting following posts:</p>

<p>Vacancies:<br />Junior Research Fellow-04<br />Age Limits:<br />Candidates age should be not more than 28 years.<br />Qualification:<br />Candidates should possess M.Sc in Microbiology/ Marine microbiology/Marine Biotechnology/ Bioinformatics/Zoology or equivalent degree with minimum 60% marks.<br />Selection Process:<br />Shortlisted candidates will be called for interview.<br />How to Apply:<br />Eligible candidates may send their applications in the prescribed format along with CV in an envelope should be superscribed as the "Application for the post of JRF" to Head Department of Zoology, Savitribai Phule Pune University on or before 10-05-2015.<br />Last Date:<br />10-05-2015</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43546/introduction-to-phylogenies-in-r</guid>
	<pubDate>Wed, 13 Oct 2021 02:27:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43546/introduction-to-phylogenies-in-r</link>
	<title><![CDATA[Introduction to phylogenies in R]]></title>
	<description><![CDATA[<p><span>R phylogenetics is built on the contributed packages for phylogenetics in R, and there are many such packages. Let's begin today by installing a few critical packages, such as ape, phangorn, phytools, and geiger. To get the most recent CRAN version of these packages, you will need to have R 3.3.x installed on your computer!</span></p><p>Address of the bookmark: <a href="http://www.phytools.org/Cordoba2017/ex/2/Intro-to-phylogenies.html" rel="nofollow">http://www.phytools.org/Cordoba2017/ex/2/Intro-to-phylogenies.html</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/22352/affy-has-acquired-eureka-genomics-for-15m</guid>
	<pubDate>Wed, 20 May 2015 15:11:20 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/22352/affy-has-acquired-eureka-genomics-for-15m</link>
	<title><![CDATA[Affy has acquired Eureka Genomics for 15M $]]></title>
	<description><![CDATA[<p>Affymetrix Acquires Assets Of Eureka Genomics Corporation To Provide High Throughput And Economical Crop And Animal Genotyping</p><p>http://www.thestreet.com/story/13151062/1/affymetrix-acquires-assets-of-eureka-genomics-corporation-to-provide-high-throughput-and-economical-crop-and-animal-genotyping.html</p>]]></description>
	<dc:creator>Martin Jones</dc:creator>
</item>

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