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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/29276?offset=460</link>
	<atom:link href="https://bioinformaticsonline.com/related/29276?offset=460" rel="self" type="application/rss+xml" />
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22239/jrf-bioinformatics-at-national-institute-of-high-security-animal-diseases-icar</guid>
  <pubDate>Tue, 28 Apr 2015 02:21:15 -0500</pubDate>
  <link></link>
  <title><![CDATA[JRF Bioinformatics at National Institute of High Security Animal Diseases (ICAR)]]></title>
  <description><![CDATA[
<p>F.No. 4-59/2013-NIHSAD Dated: 21st April, 2015</p>

<p>SRF/ JRF job vacancies in National Institute of High Security Animal Diseases (ICAR)</p>

<p>Name of Post : JRF</p>

<p>No. of Post : 01</p>

<p>Qualification : M.V.Sc or M.Tech./M.Sc. (preferably with NET qualification) in one of following disciplines. (Biotechnology/Molecular Biology/Genetics/Microbiology/Bioinformatics or equivalent Life Sciences discipline). Desirable: Working Knowledge in the areas of Recombinant DNA Techniques, Cell Culture, Handling Laboratory Animals, Genomics.</p>

<p>Emolument : Rs.16,000/-</p>

<p>Age Limit : Up to 30 years</p>

<p>Name of Post : Project Assistant</p>

<p>No of Post : 01</p>

<p>Qualifications : First class M.Sc. /B.E/B.Tech. in one of the following disciplines Biotechnology/ Bioinformatics/ Microbiology or equivalent Life Sciences discipline). Desirable : Exposure of working in research environment, Good command over written/spoken English and computer applications.</p>

<p>Emolument : Rs.8000/-</p>

<p>Age Limit : Upto 28 years</p>

<p>Name of Post : Project Assistant</p>

<p>No of Post : 01</p>

<p>Qualification : First class M.Sc. /B.V.Sc. and A.H., B.Tech. /B.E. in Life Sciences and related areas. Desirable: Exposure of working in research environment, Good command over written/type written/spoken English and computer applications. </p>

<p>Emoluments : Rs. 8000/-</p>

<p>Age Limit : Up to 28 years<br />How to apply</p>

<p>Desirous candidates may send their applications by e-mail (techcell@hsadl.nic.in ) followed by post in the prescribed proforma latest by 11/05/2015. Walk-in-Interview will be held at NIHSAD, Kokta Road, Anand Nagar, Bhopal-462022.</p>

<p>http://www.nihsad.nic.in/pdf/Advt.pdf</p>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44770/nvidia-and-arc-institute-unveil-evo-2-a-breakthrough-ai-for-dna-design</guid>
	<pubDate>Fri, 21 Feb 2025 10:39:47 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44770/nvidia-and-arc-institute-unveil-evo-2-a-breakthrough-ai-for-dna-design</link>
	<title><![CDATA[NVIDIA and Arc Institute Unveil Evo 2: A Breakthrough AI for DNA Design]]></title>
	<description><![CDATA[<p>NVIDIA and the Arc Institute have introduced <strong style="font-size: 12.8px;">Evo 2</strong>, a groundbreaking AI model designed to <strong style="font-size: 12.8px;">understand, predict, and generate DNA sequences</strong>. This marks a major advancement in computational biology, offering scientists an unprecedented tool to decode the genetic blueprint of life and even design entirely new biological systems.</p><h3><strong>The Power of Evo 2: AI Meets DNA</strong></h3><p>Evo 2 is <strong>the largest AI model for biology ever created</strong>, trained on an astonishing <strong>9.3 trillion DNA "letters"</strong> (nucleotides) carefully selected from genomes spanning the entire tree of life. This massive dataset ensures that Evo 2 can recognize patterns and relationships in genetic sequences at an unparalleled scale.</p><p>For the first time, scientists can <strong>design DNA with AI</strong>, moving beyond simple sequence analysis to active DNA generation. Evo 2 enables researchers to <strong>predict, modify, and even create entire genetic sequences</strong>, opening new possibilities in medicine, agriculture, and synthetic biology.</p><h3><strong>Decoding the Dark Genome</strong></h3><p>One of the biggest challenges in genetics is understanding the <strong>non-coding regions</strong> of DNA&mdash;vast stretches of the genome that do not code for proteins but play crucial roles in regulating gene expression. These regions control when and how genes are activated, influencing everything from development to disease.</p><p>Evo 2 is designed to <strong>decode these non-coding elements</strong>, helping researchers uncover their functions and use this knowledge to develop gene-based therapies, synthetic life forms, and precision agriculture solutions.</p><h3><strong>From Reading DNA to Writing It</strong></h3><p>To put Evo 2&rsquo;s impact into perspective:</p><ul>
<li><strong>Previous AI models could "read" DNA</strong> like a book, analyzing genetic sequences and identifying patterns.</li>
<li><strong>Evo 2 can "write" entirely new DNA</strong>, designing functional genes, chromosomes, and even full genomes from scratch.</li>
</ul><p>This means scientists can now <strong>engineer biological systems with AI</strong>, designing new proteins, metabolic pathways, and genetic circuits to address real-world challenges.</p><h3><strong>A Step Toward Generative Biology</strong></h3><p>The Arc Institute describes Evo 2 as a major step toward <strong>"generative biology"</strong>&mdash;a revolutionary approach where AI is used to create <strong>novel biological structures</strong> rather than just analyzing existing ones. This could lead to breakthroughs such as:</p><ul>
<li><strong>New medicines</strong>: AI-generated enzymes and proteins tailored for targeted therapies.</li>
<li><strong>Disease-resistant crops</strong>: Genetically optimized plants for higher yield and climate resilience.</li>
<li><strong>Synthetic organisms</strong>: Custom-designed microbes for bioremediation, biofuel production, and industrial applications.</li>
</ul><h3><strong>An Open-Source Revolution</strong></h3><p>Unlike many proprietary AI models, <strong>Evo 2 is open source</strong>, making its capabilities accessible to researchers worldwide. This democratization of AI-driven biology means that scientists from different disciplines can <strong>collaborate, experiment, and innovate</strong>, accelerating discoveries in genetic engineering and synthetic biology.</p><p>With Evo 2, the boundaries of what&rsquo;s possible in <strong>DNA design, genetic engineering, and biological innovation</strong> are being redrawn. The future of life sciences is no longer just about understanding life&rsquo;s code&mdash;it&rsquo;s about writing it.</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22285/project-associate-bioinformatics-iit-mandi</guid>
  <pubDate>Wed, 06 May 2015 06:18:47 -0500</pubDate>
  <link></link>
  <title><![CDATA[Project Associate Bioinformatics @ IIT Mandi]]></title>
  <description><![CDATA[
<p>Eligibility : MSc(Bio-Informatics, Bio-Tech), BSc, BE/B.Tech(Bio-Medical /Bio-Technology Engg, CSE)</p>

<p>Location : Kulu</p>

<p>Job Category : Govt Jobs, Research</p>

<p>Last Date : 20 May 2015</p>

<p>Job Type : Full Time</p>

<p>Hiring Process : Walk - In<br />IIT Mandi - Job Details<br />IIT Mandi</p>

<p>Project Associate Bioinformatics Job vacancies in IIT Mandi on purely temporary</p>

<p>Project: “Exploring the Human Microbiome: A hunt for the candidates for Pre- and Pro-biotics.”</p>

<p>Minimum Qualification and Experience: M.Sc. in Bioinformatics OR B.Tech / BE in Bioinformatics OR M. Sc. in Biotechnology / Life sciences or related areas with Diploma or relevant experience in Bioinformatics OR B.Tech in Biotechnology / Computer Science or MCA or B. Sc. in Life Sciences or related areas with PG diploma in Bioinformatics. Candidates with experience in NGS data handling and analysis will be preferred. Tenure: Initially for one year, extendable based upon performance.</p>

<p>No of Posts: 01</p>

<p>Salary: Rs. 12000- 18000/- per month.</p>

<p>How to apply</p>

<p>Interested candidates can come for a Walk-in-Interview on 20th May 2015 starting at 8:30 AM at the Academic Block, Indian Institute of Technology (IIT), Mandi, Vallabh College Campus, Near Bus Stand, Mandi, HP. The candidates should bring along their curriculum vitae (CV) and copies of educational and experience certificates. In case of any queries please contact: Dr. Tulika Prakash Srivastava (Principal Investigator), Indian Institute of Technology Mandi, Near Bus Stand Mandi - 175 001, Himachal Pradesh.</p>

<p>More at</p>

<p>http://www.iitmandi.ac.in/administration/advrt/Walk-in-interview_Ad.pdf</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41571/wego-simple-but-useful-tool-for-visualizing-comparing-and-plotting-go-gene-ontology-annotation-results</guid>
	<pubDate>Sun, 12 Apr 2020 10:02:22 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41571/wego-simple-but-useful-tool-for-visualizing-comparing-and-plotting-go-gene-ontology-annotation-results</link>
	<title><![CDATA[WEGO : simple but useful tool for visualizing, comparing and plotting GO (Gene Ontology) annotation results]]></title>
	<description><![CDATA[<p><span>WEGO (Web Gene Ontology Annotation Plot) is a simple but useful tool for visualizing, comparing and plotting GO (Gene Ontology) annotation results. As the GO vocabulary became more and more popular, WEGO was widely adopted and used in many researches. Therefore we have updated WEGO 2.0 in 2018. Here are some changes we&rsquo;ve made:</span><br><span>1. The limit of input file numbers was cancelled. Now the users could upload as many files as they want with one operation.</span><br><span>2. We have added the reference data of 9 species for users selection.</span><br><span>3. Besides the traditional WEGO histogram, WEGO 2.0 outputs an additional type of bar graph showing GO terms with significant gene number differences.</span></p><p>Address of the bookmark: <a href="http://wego.genomics.org.cn/" rel="nofollow">http://wego.genomics.org.cn/</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22317/project-associate-bioinformatics-central-food-technological-research-institute-cftri</guid>
  <pubDate>Tue, 19 May 2015 07:01:12 -0500</pubDate>
  <link></link>
  <title><![CDATA[Project Associate Bioinformatics @ Central Food Technological Research Institute (CFTRI)]]></title>
  <description><![CDATA[
<p>Central Food Technological Research Institute (CFTRI)</p>

<p>Project Assistant (Level-II) job position in Central Food Technological Research Institute (CFTRI) on a temporary contractual basis in the research project (GAP 0469) funded by Science &amp; Engineering Research Board (SERB), Government of India, New Delhi tenable at the Lipidomics Centre, CSIR-CFTRI, Mysore, Karnataka</p>

<p>Name of the Position : </p>

<p>Qualification : First class M. Sc. in Biochemistry/Microbiology/Genetics/ Bioinformatics with good academic record and preferably with experience in molecular biology techniques and basic knowledge of molecular biology and biological chemistry</p>

<p>Emoluments : Rs. 12,000/- per month (Consolidated)</p>

<p>Age Limit : The upper age limit for applying shall be 28 years (as on 22-5-2015), which is relaxed for candidates belonging to Scheduled Castes/Schedule Tribes, Women, Persons with Disabilities (PWD) and OBCs as per GoI norms. <br /> <br />How to apply</p>

<p>Eligible candidates may send their complete Bio-data with e-mail address/contact phone number along with attested copies of the necessary certificates through post to Prof. Ram Rajasekharan, Lipidomics Centre, Department of Lipid Science, CSIR-CFTRI, Mysore-570 020, Karnataka (email: ram@cftri.res.in) on or before 22.05.2015</p>

<p>More at http://www.cftri.com/pa_gap0469.html</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/39039/dotplotly-generate-an-interactive-dot-plot-from-mummer-or-minimap-alignments</guid>
	<pubDate>Thu, 21 Feb 2019 10:22:17 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/39039/dotplotly-generate-an-interactive-dot-plot-from-mummer-or-minimap-alignments</link>
	<title><![CDATA[dotPlotly: Generate an interactive dot plot from mummer or minimap alignments]]></title>
	<description><![CDATA[<p>Create an interactive dot plot from mummer output OR PAF format</p>
<p>R script that makes a plotly interactive and/or static (png/pdf) dot plot.</p>
<p><a href="https://tom-poorten.shinyapps.io/dotplotly_shiny/">Shiny app available for testing</a></p><p>Address of the bookmark: <a href="https://github.com/tpoorten/dotPlotly" rel="nofollow">https://github.com/tpoorten/dotPlotly</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22430/nrco-vacancies-for-junior-research-fellow-%E2%80%93-pakyong-sikkim</guid>
  <pubDate>Thu, 28 May 2015 19:10:07 -0500</pubDate>
  <link></link>
  <title><![CDATA[NRCO Vacancies For Junior Research Fellow – Pakyong, Sikkim]]></title>
  <description><![CDATA[
<p>Junior Research Fellow<br />Pay Scale:Rs 25,000/-<br />Educational Requirements:MSc (with NET qualification) / M.Tech degree (with or without NET) with minimum 55% marks in Biotechnology/ Bioinformatics/ Molecular Biology or any other related field.<br />Other Qualification:Computer Skills (Linux, Perl, Java, MySQL) with experience in advanced molecular Biology techniques.<br />No of Post: 01<br />How To Apply: Walk-in-Interviews will be held at ICAR-National Research Centre for Orchids,Pakyong 737106, Sikkim for the post of 01 (One) Junior Research Fellow and 01 (One) Project Attendant under Project ‘DBT’s Twinning programme for the NE’ titled “Assessment of chemical and genetic divergence of some fragrant orchids of north-east India for sustainable improvement of community livelihood” as indicated below. The appointment will be on contractual basis and the incumbents shall not have any claim for regular appointment in ICAR.</p>

<p>Details will be available at: http://nrcorchids.nic.in/Employments/Vacancy%20-%20JRF.pdf</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43319/k-mers-tutorial-classification-and-taxonomy</guid>
	<pubDate>Thu, 26 Aug 2021 10:28:43 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43319/k-mers-tutorial-classification-and-taxonomy</link>
	<title><![CDATA[k-mers tutorial - classification and taxonomy]]></title>
	<description><![CDATA[<p>DNA k-mers underlie much of our assembly work, and we (along with many others!) have spent a lot of time thinking about how to&nbsp;<a href="http://www.pnas.org/content/109/33/13272">store k-mer graphs efficiently</a>,&nbsp;<a href="http://ivory.idyll.org/blog/what-is-diginorm.html">discard redundant data</a>, and&nbsp;<a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0101271">count them efficiently</a>.</p>
<p>More recently, we've been enthused about&nbsp;<a href="http://joss.theoj.org/papers/3d793c6e7db683bee7c03377a4a7f3c9">using k-mer based similarity measures</a>&nbsp;and&nbsp;<a href="http://ivory.idyll.org/blog/2016-sourmash-sbt.html">computing and searching k-mer-based sketch search databases for all the things</a>.</p>
<p>But I haven't spent too much talking about using k-mers for taxonomy, although that has become an&nbsp;<em>ahem</em>&nbsp;area of interest recently,&nbsp;<a href="http://www.biorxiv.org/content/early/2017/07/03/155358">if you read into our papers a bit</a>.</p>
<p>In this blog post I'm going to fix this by doing a little bit of a literature review and waxing enthusiastic about other people's work. Then in a future blog post I'll talk about how we're building off of this work in fun! and interesting? ways!</p><p>Address of the bookmark: <a href="http://ivory.idyll.org/blog/2017-something-about-kmers.html" rel="nofollow">http://ivory.idyll.org/blog/2017-something-about-kmers.html</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44362/biostats-book</guid>
	<pubDate>Mon, 14 Aug 2023 03:11:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44362/biostats-book</link>
	<title><![CDATA[Biostats book !]]></title>
	<description><![CDATA[<p>https://practical-stats-med-r.netlify.app/</p><p>Address of the bookmark: <a href="https://practical-stats-med-r.netlify.app/" rel="nofollow">https://practical-stats-med-r.netlify.app/</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22435/assistant-professor-central-university-of-himachal-pradesh-india</guid>
  <pubDate>Thu, 28 May 2015 19:22:49 -0500</pubDate>
  <link></link>
  <title><![CDATA[Assistant Professor, Central University of Himachal Pradesh, India]]></title>
  <description><![CDATA[
<p>Central University of Himachal Pradesh</p>

<p>PO Box: 21</p>

<p>DHARAMSHALA, DISTRICT KANGRA, HIMACHAL PRADESH – 176215</p>

<p>EMPLOYMENT NOTICE NO.: 02 / 2015</p>

<p>APPOINTMENT TO VARIOUS TEACHING, NON-TEACHING AND OTHER ACADEMIC STAFF POSITIONS</p>

<p>Applications in the prescribed form are invited from the eligible candidates for the following Teaching, Non-Teaching and other Academic Staff positions to be filled up on regular basis: Details of teaching positions:</p>

<p>15. School of Life Sciences</p>

<p>Computational Biology &amp; Bioinformatics</p>

<p>1 (ST - 1) 2 (UR - 2)</p>

<p>Last Date of receipt of applications: 22ND JUNE, 2015</p>

<p>Advertisement:</p>

<p>http://www.cuhimachal.ac.in/download/2015/may-2015/emp-notice-eng/1.%20Employment%20Notice%20No.%2002-2015%20dated%2019.05.2015_for%20Website.pdf</p>
]]></description>
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