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<channel>
	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/29284?offset=1600</link>
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	<description><![CDATA[]]></description>
	
	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43614/mitoz-a-toolkit-for-animal-mitochondrial-genome-assembly-annotation-and-visualization</guid>
	<pubDate>Tue, 30 Nov 2021 23:23:57 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43614/mitoz-a-toolkit-for-animal-mitochondrial-genome-assembly-annotation-and-visualization</link>
	<title><![CDATA[MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization]]></title>
	<description><![CDATA[<p>MitoZ, consisting of independent modules of <em>de novo</em> assembly, findMitoScaf (find Mitochondrial Scaffolds), annotation and visualization, that can generate mitogenome assembly together with annotation and visualization results from HTS raw reads.</p>
<p>https://academic.oup.com/nar/article/47/11/e63/5377471</p><p>Address of the bookmark: <a href="https://github.com/linzhi2013/MitoZ" rel="nofollow">https://github.com/linzhi2013/MitoZ</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/19992/binc-examination-2015</guid>
	<pubDate>Mon, 29 Dec 2014 12:23:37 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/19992/binc-examination-2015</link>
	<title><![CDATA[BINC examination 2015 !!!]]></title>
	<description><![CDATA[<p>Pondicherry University,Puducherry,on behalf of Department of Biotechnology, Government of India, will conduct the BINC examination in 2015. The objective of this examination is to certify bioinformatics professionals, trained formally as well as self-trained.Registration for BINC examination 2015 will open soon.</p><p>Pondicherry University Puducherry has been identified as a nodal agency by the Department of Biotechnology, Govt. of India to coordinate this examination along with nine centres namely, Pune University, Pune; Anna University, Chennai; Calcatta University (WBUT) Kolkata; Institute of Bioinformatics &amp; Applied Biotechnology, Bangalore; North-Eastern Hill University, Shillong, University of Hyderabad, Hyderabad; University of Kerala, Thiruvananthapuram; Jawaharlal Nehru University, New Delhi and Assam Agricultural University, Guwahati.</p><p>In the BINC 2013 examination,17 candidates were certified. DBT has agreed to fund Research fellowships for all the BINC qualified Indian nationals to pursue Ph.D. in Indian Institutes/Universities. Note that the candidate must possess a postgraduate degree(or equivalent) &amp; meet the criteria of the institutes/universities in order to avail research fellowship. In addition, cash prize of Rs. 10,000/- will be awarded to the top 10 BINC qualifiers.<br /><br /></p><p>More at http://210.212.230.224:9999/BINC/</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43693/plar-pipeline-for-lncrna-annotation-from-rna-seq-data</guid>
	<pubDate>Fri, 07 Jan 2022 06:18:01 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43693/plar-pipeline-for-lncrna-annotation-from-rna-seq-data</link>
	<title><![CDATA[PLAR: Pipeline for lncRNA annotation from RNA-seq data]]></title>
	<description><![CDATA[<p><span>Due to several requests, we are releasing an assingment of orthologs, determined using the same methods used in Hezroni et al. (BLAST, Whole Genome Alignment (WGA), and synteny). One is comparing human GENCODE genes (from GENCODE v30) to lncRNAs from other species identified by PLAR. Available&nbsp;</span><a href="ftp://ftp-igor.weizmann.ac.il/pub/gencode_orthologs_v3.txt.gz">here</a><span>.</span></p>
<p>&nbsp;</p>
<table border="1" cellspacing="0" cellpadding="0">
<tbody>
<tr>
<td rowspan="1" colspan="1">
<p><strong>Species</strong></p>
</td>
<td rowspan="1" colspan="1">
<p><strong>Assembly</strong></p>
</td>
<td rowspan="1" colspan="1">
<p><strong>Code</strong></p>
</td>
<td rowspan="1" colspan="1">
<p><strong>Transcriptome</strong></p>
</td>
<td rowspan="1" colspan="1">
<p><strong>lncRNAs</strong></p>
</td>
<td rowspan="1" colspan="1">
<p><strong>Protein-coding</strong></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Human</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2Fhg19%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNE8D2HpSsuVeU5oUWAahOi6qUkSTA">hg19</a></p>
</td>
<td rowspan="1" colspan="1">
<p>hg19</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/hg19.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/hg19.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/hg19.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Rhesus</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FrheMac3%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNE9JVXif3Efp4FVGd43K-BjTjrpwQ">rheMac3</a></p>
</td>
<td rowspan="1" colspan="1">
<p>rm3</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/rm3.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/rm3.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/rm3.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Marmoset</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FcalJac3%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNERBzLoHTuzHgX48eG9B5JwHfJeUg">calJac3</a></p>
</td>
<td rowspan="1" colspan="1">
<p>cj3</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cj3.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cj3.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cj3.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Mouse</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2Fmm9%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNFn4Vo-WHyxU1rVfWVKfgYCsdbvBw">mm9</a></p>
</td>
<td rowspan="1" colspan="1">
<p>mm9</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/mm9.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/mm9.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/mm9.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Rabbit</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2ForyCun2%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNHV9p_9vZ6-wtW3ofOStkok2HmGYg">oryCun2</a></p>
</td>
<td rowspan="1" colspan="1">
<p>oc2</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/oc2.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/oc2.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/oc2.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Dog</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FcanFam3%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNF_CL0xW8BrQktADnX1_cKL5r7Zyw">canFam3</a></p>
</td>
<td rowspan="1" colspan="1">
<p>cf3</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cf3.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cf3.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cf3.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Ferret</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://hgdownload.soe.ucsc.edu/goldenPath/musFur1/bigZips/">musFur1</a></p>
</td>
<td rowspan="1" colspan="1">
<p>oa3</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/mf1.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/mf1.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/mf1.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Opossum</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FmonDom5%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNFeZz8NVTDJzR7uP7dIFOnACpuL7A">monDom5</a></p>
</td>
<td rowspan="1" colspan="1">
<p>md5</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/md5.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/md5.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/md5.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Chicken</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FgalGal4%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNFDsmU33MtwXzpaZZQHlrfI4OwsyA">galGal4</a></p>
</td>
<td rowspan="1" colspan="1">
<p>gg4</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/gg4.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/gg4.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/gg4.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Lizard</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FanoCar2%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNEt4SZWNfHnA7MvJ6RWiql_yut4og">anoCar2</a></p>
</td>
<td rowspan="1" colspan="1">
<p>ac2</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ac2.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ac2.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ac2.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Coelacanth</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FlatCha1%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNH17mc_Am63OygexvbH391-GPoqBg">latCha1</a></p>
</td>
<td rowspan="1" colspan="1">
<p>lc1</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/lc1.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/lc1.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/lc1.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Zebrafish</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FdanRer7%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNEgbPFFLxSYaERAtOLpbqIa5NmeCA">danRer7</a></p>
</td>
<td rowspan="1" colspan="1">
<p>dr7</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/dr7.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/dr7.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/dr7.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Stickleback</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload-test.sdsc.edu%2FgoldenPath%2FgasAcu1%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNHLiWgr54hkQYAxKeU9FJn0FKzEDA">gasAcu1</a></p>
</td>
<td rowspan="1" colspan="1">
<p>ga1</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ga1.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ga1.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ga1.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Nile tilapia</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2ForeNil2%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNEgaAhALRYb2ZYx_ItCO53E3mgZ2w">oreNil2</a></p>
</td>
<td rowspan="1" colspan="1">
<p>ot2</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ot2.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ot2.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/ot2.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Spotted gar</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload-test.cse.ucsc.edu%2FgoldenPath%2FlepOcu1%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNEbTQSWyyyZXk3eYiwkkAySMRdKTg">lepOcu1</a></p>
</td>
<td rowspan="1" colspan="1">
<p>lo1</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/lo1.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/lo1.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/lo1.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Elephant shark</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload.soe.ucsc.edu%2FgoldenPath%2FcalMil1%2FbigZips%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNH2mc_GFk5E6kmVXftLL2lZVClIUQ">calMil1</a></p>
</td>
<td rowspan="1" colspan="1">
<p>cm1</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cm1.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cm1.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/cm1.coding.bed.gz">Download</a></p>
</td>
</tr>
<tr>
<td rowspan="1" colspan="1">
<p>Sea urchin</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="http://www.google.com/url?q=http%3A%2F%2Fhgdownload-test.cse.ucsc.edu%2FgoldenPath%2FstrPur4%2F&amp;sa=D&amp;sntz=1&amp;usg=AFQjCNHQ_Coxb_z7jTAweTFkO0KtHZKjEA">strPur4</a></p>
</td>
<td rowspan="1" colspan="1">
<p>sp4</p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/sp4.transcriptome.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/sp4.lncRNAs.bed.gz">Download</a></p>
</td>
<td rowspan="1" colspan="1">
<p><a href="ftp://ftp-igor.weizmann.ac.il/pub/CLAP/data/sp4.coding.bed.gz">Download</a></p>
</td>
</tr>
</tbody>
</table>
<p>&nbsp;</p><p>Address of the bookmark: <a href="http://www.weizmann.ac.il/Biological_Regulation/IgorUlitsky/PLAR" rel="nofollow">http://www.weizmann.ac.il/Biological_Regulation/IgorUlitsky/PLAR</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/20448/jrf-in-bioinformatics-nehu</guid>
  <pubDate>Tue, 20 Jan 2015 22:57:49 -0600</pubDate>
  <link></link>
  <title><![CDATA[JRF in Bioinformatics @ NEHU]]></title>
  <description><![CDATA[
<p>Department of Botany &amp; Bioinformatics Centre<br />NORTH-EASTERN HILL UNIVERSITY, SHILLONG 793022</p>

<p>Applications with complete bio-data from candidates possessing the required qualifications are invited for the posts of JRF (2) and Project Assistant (1) in</p>

<p>DBT, GOI-funded research project “Next Generation Sequencing (NGS)- based de novo assembly of expressed transcripts and genome information of Orchids in North-East India” in DBT’s Twinning programme for NE as per DBT sanction order and norms.</p>

<p>(i) JRF(2 nos.):</p>

<p>Qualifications: M.Tech/M.Sc in Life Sciences/ Botany/ Zoology/Biochemistry/ Biotechnology/ Bioinformatics; Desirable: Aptitude for Bioinformatics and Computer Programming/ Next generation sequencing data analysis</p>

<p>(ii) Project Assistant (1 no.):</p>

<p>Qualifications: Graduation in Science, Desirable: Experience of working in a Life Science/Plant Biotechnology lab. and familiarity with computers and field work viz. collection of samples.</p>

<p>The applications through email bicnehu@gmail.com or post must reach the undersigned<br />within 15 days from the date of publication of this advertisement. The advertised posts are purely temporary for the duration of the project and subject to availability of the funds from DBT. The appointment does not confer any entitlement or right over the posts for absorption in the University service.</p>

<p>Advertisement: www.nehu.ac.in/Advertisements/BICAdvtPV_200115.pdf</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/20362/20th-international-bioinformatics-workshop-on-virus-evolution-and-molecular-epidemiology-veme</guid>
  <pubDate>Mon, 12 Jan 2015 01:39:45 -0600</pubDate>
  <link></link>
  <title><![CDATA[20th International BioInformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME)]]></title>
  <description><![CDATA[
<p>20th International BioInformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME)<br />9 - 14 August 2015 St. Augustine, Trinidad and Tobago </p>

<p>Organiser: Christine Carrington (University of the West Indies - UWI, St. Augustine, Trinidad and Tobago)<br />Co-organisers: Anne-Mieke Vandamme, Philippe Lemey (Katholieke Universiteit Leuven, Belgium), Marco Salemi, Mattia Prosperi (University of Florida, Gainesville, USA) and Karen E. Nelson (J. Craig Venter Institute, Rockville, USA)</p>

<p>Requests for information directly to:<br />Christine Carrington<br />Department of Preclinical Sciences<br />Faculty of Medical Sciences<br />University of the West Indies (UWI)<br />St. Augustine<br />Trinidad and Tobago<br />Telephone: +1-868-6452640 ext. 5009, +1-868-6848803<br />Fax: +1-868-6621873<br />E-mail: veme2015@sta.uwi.edu</p>

<p>Deadline for receipt of applications by local organiser: 15 March 2015<br />CALL FOR APPLICATIONS NOW OPEN<br />http://www.icgeb.org/course-application-trinidad-and-tobago-2015.html</p>

<p>http://rega.kuleuven.be/cev/veme-workshop/2015</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43846/the-complete-sequence-of-a-human-genome</guid>
	<pubDate>Thu, 31 Mar 2022 23:58:18 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43846/the-complete-sequence-of-a-human-genome</link>
	<title><![CDATA[The complete sequence of a human genome]]></title>
	<description><![CDATA[<p><span>The completed regions include all centromeric satellite arrays, recent segmental duplications, and the short arms of all five acrocentric chromosomes, unlocking these complex regions of the genome to variational and functional studies.</span></p><p>Address of the bookmark: <a href="https://www.science.org/doi/10.1126/science.abj6987" rel="nofollow">https://www.science.org/doi/10.1126/science.abj6987</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/20437/wuxi-has-acquired-nextcode-health</guid>
	<pubDate>Mon, 19 Jan 2015 08:17:35 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/20437/wuxi-has-acquired-nextcode-health</link>
	<title><![CDATA[WuXi has acquired NextCODE Health]]></title>
	<description><![CDATA[<p>Shanghai, China-headquartered pharmatech company WuXi (NYSE: WX) has acquired NextCODE Health, a genomic analysis and bioinformatics company based in the USA.<br /><br />The acquisition was made for $65 million in cash, and WuXi plans to merge its genome center with NextCODE Health to form a new company, WuXi NextCODE Genomics. The business will be headquartered in Shanghai and have operations in Cambridge, Massachusetts, and Reykjavik, Iceland.<br /><br />With the huge unmet medical needs in diseases with a genetic component and the rapid advances in genomics and bioinformatics, now is the right time for WuXi to make a strategic investment in this field, and NextCODE is the right partner. This new venture of WuXi NextCODE Genomics will create important new genomic and bioinformatic products and services to help make personalized treatment and medicine a reality.&nbsp; It will also enable doctors to provide better treatments to patients.<br /><br /></p>]]></description>
	<dc:creator>Pranjali Yadav</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44311/jbrowse-2-a-modular-genome-browser-with-views-of-synteny-and-structural-variation</guid>
	<pubDate>Tue, 25 Apr 2023 20:58:52 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44311/jbrowse-2-a-modular-genome-browser-with-views-of-synteny-and-structural-variation</link>
	<title><![CDATA[JBrowse 2: a modular genome browser with views of synteny and structural variation]]></title>
	<description><![CDATA[<ul dir="auto">
<li>igvjs - a create-react-app with igv package from npm installed. the igv.js is instrumented to output "DONE" to the console when finished, and to have an increased fetchSizeLimit (which is otherwise git in CRAM longread tests)</li>
<li>jb2-web - stock instance of jbrowse-web v1.7.5</li>
<li>jb1 - stock instance of jbrowse 1 v1.16.11</li>
<li>jb2 embedded - a create-react-app with @jbrowse/react-linear-genome-view</li>
</ul><p>Address of the bookmark: <a href="https://github.com/GMOD/jb2profile" rel="nofollow">https://github.com/GMOD/jb2profile</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/21200/ra-bioinformatics-at-ciba</guid>
  <pubDate>Fri, 13 Feb 2015 11:23:18 -0600</pubDate>
  <link></link>
  <title><![CDATA[RA Bioinformatics at CIBA]]></title>
  <description><![CDATA[
<p>Recruitment The following posts are to be filled purely on temporary basis under CIBA Component of “Centre for Agricultural Bioinformatics (CABin)” project at this Institute.</p>

<p>Posts Research Associate</p>

<p>Date &amp; Time of Interview 18th Feb 2015 at 10.00 a.m.</p>

<p>Project Name “Centre for Agricultural Bioinformatics (CABin)”</p>

<p>Duration 12th Plan (2012-2017) / co-terminus with the project 12th Plan (2012-2017) / co-terminus with the project</p>

<p>Essential Qualification Ph.d / M.Sc./ M.Phil (Bioinformatics) With 1st division or 60% marks or equivalent overall grade point average with at least two years of research experience in the relevant subject.</p>

<p>Technician</p>

<p>B.Tech. or Master degree in computer science/Computer Engineering /MCA or equivalent. Desirable qualification: Experience in Java/ C++/ PHP/ PERL/ Python etc. based application development using Linux, Apache and MySQL/Oracle.</p>

<p>Emoluments Rs.24000/- p.m. + 30% HRA for Ph.D holders / Rs.23000/- p.m. + 30% HRA for Master Degree holders A consolidated pay Rs.25000/- per month.</p>

<p>Age Limit Maximum 40 years for men and 45 years for women as on date of interview.</p>

<p>Age limits are relaxable for SC / ST / OBC candidates as per rules.</p>

<p>Maximum 40 years for men and 45 years for women as on date of interview.</p>

<p>Age limits are relaxable for SC / ST / OBC candidates as per rules.</p>

<p>Eligible Candidates may send their Curriculum Vitae along with the contact numbers to ashok@ciba.res.in on or before 13-02-2015.</p>

<p>Candidates selected after initial screening will be called for interview.</p>

<p>Advertisement: www.ciba.res.in/attachments/jobs/CABin-3006.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44549/quartet-a-telomere-to-telomere-toolkit-for-gap-free-genome-assembly-and-centromeric-repeat-identification</guid>
	<pubDate>Sat, 08 Jun 2024 15:54:36 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44549/quartet-a-telomere-to-telomere-toolkit-for-gap-free-genome-assembly-and-centromeric-repeat-identification</link>
	<title><![CDATA[quarTeT: a telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification.]]></title>
	<description><![CDATA[<p><span>quarTeT is a collection of tools for T2T genome assembly and basic analysis in automatic workflow.</span><br><br><span>Task include:</span></p>
<ul>
<li><a href="http://www.atcgn.com:8080/quarTeT/docuWeb.html#AssemblyMapper">AssemblyMapper</a>&nbsp;: reference-guided genome assembly</li>
<li><a href="http://www.atcgn.com:8080/quarTeT/docuWeb.html#GapFiller">GapFiller</a>&nbsp;: long-reads based gap filling</li>
<li><a href="http://www.atcgn.com:8080/quarTeT/docuWeb.html#TeloExplorer">TeloExplorer</a>&nbsp;: telomere identification</li>
<li><a href="http://www.atcgn.com:8080/quarTeT/docuWeb.html#CentroMiner">CentroMiner</a>&nbsp;: centromere candidate prediction</li>
</ul>
<p>https://academic.oup.com/hr/article/10/8/uhad127/7197191?login=false&nbsp;</p><p>Address of the bookmark: <a href="http://www.atcgn.com:8080/quarTeT/home.html" rel="nofollow">http://www.atcgn.com:8080/quarTeT/home.html</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>

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