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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/29305?offset=1280</link>
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	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/933/world-of-omics</guid>
	<pubDate>Tue, 16 Jul 2013 17:11:48 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/933/world-of-omics</link>
	<title><![CDATA[World of Omics]]></title>
	<description><![CDATA[<p>How many variants of "omics" techniques presently in use ?</p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/4356/metabolomics-and-proteomics</guid>
	<pubDate>Sat, 07 Sep 2013 17:39:49 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/4356/metabolomics-and-proteomics</link>
	<title><![CDATA[Metabolomics and Proteomics]]></title>
	<description><![CDATA[<p>Metabolomics- A realm of small molecules</p>
<p>For detail lectures on Metabolomics:</p>
<p><a href="https://www.bits.vib.be/index.php/training/117-mass-spec-data-processing#download">https://www.bits.vib.be/index.php/training/117-mass-spec-data-processing#download</a></p>
<p><a href="http://compomics.com/bioinformatics-for-proteomics/">http://compomics.com/bioinformatics-for-proteomics/</a></p>
<p><a href="http://bioinformatics.ca/workshops/2013/informatics-and-statistics-metabolomics-2013">http://bioinformatics.ca/workshops/2013/informatics-and-statistics-metabolomics-2013</a></p>
<p><a href="http://fiehnlab.ucdavis.edu/staff/kind/Teaching">http://fiehnlab.ucdavis.edu/staff/kind/Teaching</a></p><p>Address of the bookmark: <a href="http://www.uab.edu/proteomics/pdf_files/2008/Class%2002-12-08.pdf" rel="nofollow">http://www.uab.edu/proteomics/pdf_files/2008/Class%2002-12-08.pdf</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22297/appointment-of-two-traineeships-and-two-studentships-in-bioinformatics</guid>
  <pubDate>Fri, 08 May 2015 00:24:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[Appointment of two traineeships and two studentships in Bioinformatics]]></title>
  <description><![CDATA[
<p>Applications are invited for the appointment of two traineeships and two studentships in Bioinformatics for a period of six months sponsored by Department of Biotechnology, Government of India in the Bioinformatics Sub-DIC, Saraswathy Thangavelu Centre, JNTBGRI, Puthenthope, Thiruvananthapuram 695 586. The required qualifications and other details are given below.</p>

<p>Position 1: Traineeship<br />Monthly fellowship (in rupee): 5,000/-<br />No. of vacancies: Two<br />Required Qualification: First Class M.Sc Bioinformatics/ Biotechnology/ Botany</p>

<p>Position 2: Studentship<br />Monthly fellowship (in rupee): 5,000/-<br />No. of vacancies: Two<br />Required Qualification: M.Phil/M.Tech Bioinformatics/ Biotechnology/ any branch of Life Science students for doing their thesis work in the area of Bioinformatics.</p>

<p>Age limit as on 1.1.2015, 28 years. Age relaxation will be provided for SC, ST, OBC candidates as per Govt. norms.</p>

<p>Interested candidates may appear for walk-in-interview on 15th May 2015 at 10.30 am at JNTBGRI, Palode, Thiruvananthapuram. The candidate should report to the Office at Palode before 10.00 am.</p>

<p>More at http://jntbgri.res.in/news/appointment-of-two-traineeships-and-two-studentships-in-bioinformatics/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/1124/rolf-backofen-lab</guid>
  <pubDate>Thu, 18 Jul 2013 13:51:23 -0500</pubDate>
  <link></link>
  <title><![CDATA[Rolf Backofen Lab]]></title>
  <description><![CDATA[
<p>The research interest of this group include constraint programming, structure prediction in simplified protein models, investigation of protein energy landscapes, detection of RNA sequence/structure motifs, prediction and evaluation of alternative splice forms, description and detection of regulatory sequences.</p>

<p>Link @ http://www.bioinf.uni-freiburg.de/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/22393/narcis-fernandez-fuentes-lab</guid>
  <pubDate>Mon, 25 May 2015 07:30:00 -0500</pubDate>
  <link></link>
  <title><![CDATA[Narcis Fernandez-Fuentes Lab]]></title>
  <description><![CDATA[
<p>Welcome to our web-site compiling all the research-related activities of the group. Our research interests relate to a number of areas within Bioinformatics. We have a long-standing interest in protein structure prediction and structure-to-function relationships. We work in the study of biomolecular interactions, modeling of protein complexes, the study and characterization of protein-protein interactions, peptide design, modeling of genetic variation, structure-based protein design and different aspects of Plant Bioinformatics. Take a look at the our databases and servers and the list of publications for more information.</p>

<p>More at http://www.bioinsilico.org/</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/36730/bprna-large-scale-automated-annotation-and-analysis-of-rna-secondary-structure</guid>
	<pubDate>Wed, 23 May 2018 03:24:33 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/36730/bprna-large-scale-automated-annotation-and-analysis-of-rna-secondary-structure</link>
	<title><![CDATA[bpRNA: large-scale automated annotation and analysis of RNA secondary structure]]></title>
	<description><![CDATA[<p>bpRNA, a novel annotation tool capable of parsing RNA structures, including complex pseudoknot-containing RNAs, to yield an objective, precise, compact, unambiguous, easily-interpretable description of all loops, stems, and pseudoknots, along with the positions, sequence, and flanking base pairs of each such structural feature.</p>
<p>The bpRNA code is written in perl and requires the Graph perl module. Several additional scripts for analysis are included. The source code is available at http://github.com/hendrixlab/bpRNA.</p><p>Address of the bookmark: <a href="http://github.com/hendrixlab/bpRNA" rel="nofollow">http://github.com/hendrixlab/bpRNA</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22431/genomic-scientist-at-udsc</guid>
  <pubDate>Thu, 28 May 2015 19:14:23 -0500</pubDate>
  <link></link>
  <title><![CDATA[Genomic Scientist at UDSC]]></title>
  <description><![CDATA[
<p>Centre for Genetic Manipulation of Crop Plants</p>

<p>Department of Genetics</p>

<p>University of Delhi South Campus</p>

<p>NEW DELHI – 110 021</p>

<p>WALK-IN-INTERVIEW FOR THE TEMPORARY POSITIONS OF RESEACH SCIENTIT &amp; LAB / FIELD ATTENDANT</p>

<p>1 Research Scientist (RS) – 3</p>

<p>    DBT, Ph. D.</p>

<p>    Experience on DNA Markers, plant genome mapping and bioinformatics</p>

<p>    Salary: 60,000 (Consolidated) + 5% annual increment</p>

<p>    Date and time: 25.06.2015 at 10:30 AM</p>

<p>These temporary positions have been sanctioned in a DBT funded project for the Phase II on ‘Centre of Excellence on genome mapping and molecular breeding of Brassicas.’</p>

<p>The applicants are requested to register their names on the day of interview in the First Floor, Biotech Centre, Centre for Genetic Manipulation of Crop Plants, Department of Genetics before the stipulated time for the interview. Only the registered eligible candidates will be interviewed on the day in the Committee Room.</p>

<p>Applicants are requested to bring all related documents, in original and a set of photocopy, for verification.</p>

<p>No TA/DA will be paid for attending the interview.</p>

<p>Advertisement:</p>

<p>www.du.ac.in/du/index.php?mact=News,cntnt01,detail,0&amp;cntnt01articleid=5492&amp;cntnt01returnid=83</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22432/walk-ins-for-jrf-ans-srf-post-in-assam-agricultural-university</guid>
  <pubDate>Thu, 28 May 2015 19:16:47 -0500</pubDate>
  <link></link>
  <title><![CDATA[Walk-ins for JRF ans SRF post in Assam Agricultural University]]></title>
  <description><![CDATA[
<p>Distributed Information Centre<br />Department of Agricultural Biotechnology<br />Assam Agricultural University<br />Jorhat – 785 013<br />Walk-in interview</p>

<p>(ABT/DIC/01/2014 (No. AAU/ABT/DIT/Advt. 01/2015/111 Dtd. 19-05-2015)</p>

<p>Walk in interview for the following position will be held on 6th June, 2015 at 10.00AM in the Office Chamber of the undersigned. Candidates may appear for the interview with bio-data, reprints / publication / thesis etc and passport size photographs, original and attested copies of all testimonials etc, which must be presented at the time of interview. The applicants may submit their resume in advance tomkmodi@aau.ac.in.</p>

<p>Research Associate</p>

<p>    Ph.D. in Biotechnology/ Bioinformatics. Or</p>

<p>    Masters degree in Biotechnology/Bioinformatics with minimum 3(three) years research experience</p>

<p>    Desirable : Experience in Bioinformatics as evidenced from published research</p>

<p>    Rs 36,000+HRA for the 1st two years and 38,000+HRA for the 3rd year.</p>

<p>Senior Research Fellow</p>

<p>    Master Degree in Biotechnology/ Bioinformatics. With 2 (two) years  Experience in Bioinformatics as evidenced from Course work/ Diploma/Published research</p>

<p>    Rs 28,000+HRA for NET qualified candidate/Professional degree holder</p>

<p>    Rs 18,000+HRA for non-NET qualified general degree holder</p>

<p>Junior Research Fellow</p>

<p>    Master Degree in Biotechnology/ Bioinformatics/Computer Science/Computer Application</p>

<p>    Desirable: Experience in Bioinformatics as evident from Course work/ Diploma/Published research</p>

<p>    Rs 25,000+HRA for NET qualified candidate/Professional degree holder</p>

<p>    Rs 16,000+HRA for non-NET qualified general degree holder</p>

<p>Note: Term and conditions will be as per the DBT, Govt of India guidelines.</p>

<p>Advertisement: http://14.139.222.145/classified/biotech46.html</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/43997/tools-for-rna-classification</guid>
	<pubDate>Tue, 08 Nov 2022 03:39:11 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/43997/tools-for-rna-classification</link>
	<title><![CDATA[Tools for RNA classification]]></title>
	<description><![CDATA[<p><span>barrnap</span>&nbsp;-&nbsp;<a href="https://github.com/tseemann/barrnap" target="_blank">https://github.com/tseemann/barrnap</a></p><p><span>CPAT</span>&nbsp;-&nbsp;<a href="https://github.com/liguowang/cpat" target="_blank">https://github.com/liguowang/cpat</a>,&nbsp;<a href="http://lilab.research.bcm.edu/" target="_blank">http://lilab.research.bcm.edu/</a>&nbsp;(web server)</p><p><span>CPC2</span>&nbsp;-&nbsp;<a href="https://github.com/gao-lab/CPC2_standalone" target="_blank">https://github.com/gao-lab/CPC2_standalone</a>,&nbsp;<a href="http://cpc2.gao-lab.org/" target="_blank">http://cpc2.gao-lab.org/</a>&nbsp;(web server)</p><p><span>Infernal</span>&nbsp;-&nbsp;<a href="http://eddylab.org/infernal/" target="_blank">http://eddylab.org/infernal/</a>,&nbsp;<a href="https://github.com/EddyRivasLab/infernal" target="_blank">https://github.com/EddyRivasLab/infernal</a></p><p><span>NCBI RefSeq</span>&nbsp;-&nbsp;<a href="https://www.ncbi.nlm.nih.gov/refseq/" target="_blank">https://www.ncbi.nlm.nih.gov/refseq/</a></p><p><span>Rfam</span>&nbsp;-&nbsp;<a href="http://rfam.xfam.org/" target="_blank">http://rfam.xfam.org/</a>,&nbsp;<a href="https://docs.rfam.org/en/latest/index.html" target="_blank">https://docs.rfam.org/en/latest/index.html</a></p><p><span>SILVA</span>&nbsp;-&nbsp;<a href="https://www.arb-silva.de/" target="_blank">https://www.arb-silva.de/</a></p><p><span>RNAmmer</span>&nbsp;-&nbsp;<a href="http://www.cbs.dtu.dk/services/RNAmmer/" target="_blank">http://www.cbs.dtu.dk/services/RNAmmer/</a>&nbsp;(web server, standalone download link)</p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22512/srf-post-in-nehu-shillong</guid>
  <pubDate>Wed, 03 Jun 2015 13:15:38 -0500</pubDate>
  <link></link>
  <title><![CDATA[SRF post in NEHU, Shillong]]></title>
  <description><![CDATA[
<p>Dept of Biochemistry <br />North-Eastern Hill University<br />(A University with Potential for Excellence) <br />Umshing, Shillong- 793 022</p>

<p>Applications are invited for the post of Senior Research Fellow- SRF (1) and Junior Research Fellow- JRF (1) to be appointed in a SERB-funded major research project entitled “Biochemical and functional properties of Synechocystis Glutathione S-transferase(s)” sanctioned to Dr. Timir Tripathi, Molecular and Structural Biophysics Laboratory, Department of Biochemistry, NEHU, Shillong. </p>

<p>Essential Qualifications: For both positions M.Sc. or equivalent with a good academic record is a prerequisite. </p>

<p>For Project-SRF, experience in bioinformatics/computational biology is required, which should be evident by atleast one good publication. </p>

<p>For JRF position, freshers can also apply. </p>

<p>Stipend: As per SERB norms. </p>

<p>Interested students can email their detailed bio-data including mobile number and recent photograph to msb.biochem@gmail.com, latest by 20.06.15. The hard copy is not required. The date of interview will be informed after primary scrutiny of the applications. No TA/DA will be paid if called for interview. For details of the research work of the PI’s group kindly visit www.ttripathi.webs.com</p>

<p>Advertisement: http://www.nehu.ac.in/Advertisements/BiochemSERB_Advt_020615.pdf</p>
]]></description>
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