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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/29601?offset=1000</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/19580/internship-program-for-bioinformatics-biotechnology-mba-mca-no-of-vacancy-5</guid>
  <pubDate>Mon, 15 Dec 2014 08:11:02 -0600</pubDate>
  <link></link>
  <title><![CDATA[Internship Program for Bioinformatics / Biotechnology / MBA / MCA (No. Of Vacancy: 5)]]></title>
  <description><![CDATA[
<p>ArrayGen is offering an Internship Program for Post graduate Bioinformatics / Biotechnology / MBA / MCA students and professionals. ArrayGen Technologies provide an excellent opportunity to gain research experience and explore if a scientific career is right for you. Currently we offer positions to outstanding students interested in Next Generation Sequencing (NGS) data analysis or marketing or software development. Applications are accepted throughout the year. Accepted students will be notified through email.</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/39884/retrieving-taxonomic-information-with-r</guid>
	<pubDate>Thu, 29 Aug 2019 01:38:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/39884/retrieving-taxonomic-information-with-r</link>
	<title><![CDATA[Retrieving Taxonomic Information with R]]></title>
	<description><![CDATA[<p>This vignette will introduce users to the retrieval of taxonomic information with&nbsp;<code>myTAI</code>. The&nbsp;<code>taxonomy()</code>&nbsp;function implemented in&nbsp;<code>myTAI</code>&nbsp;relies on the powerful package&nbsp;<a href="https://github.com/ropensci/taxize">taxize</a>. Nevertheless, taxonomic information retrieval has been customized for the&nbsp;<code>myTAI</code>&nbsp;standard and for organism specific information retrieval.</p>
<p>Specifically, the&nbsp;<code>taxonomy()</code>&nbsp;function implemented in&nbsp;<code>myTAI</code>&nbsp;can be used to classify genomes according to phylogenetic classification into Phylostrata (Phylostratigraphy) or to retrieve species specific taxonomic information when performing Divergence Stratigraphy (see&nbsp;<a href="https://cran.r-project.org/web/packages/myTAI/vignettes/Introduction.html">Introduction</a>&nbsp;for details).</p><p>Address of the bookmark: <a href="https://cran.r-project.org/web/packages/myTAI/vignettes/Taxonomy.html" rel="nofollow">https://cran.r-project.org/web/packages/myTAI/vignettes/Taxonomy.html</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/19792/irishgrid-irish-grid-mapping-system</guid>
	<pubDate>Fri, 26 Dec 2014 07:53:24 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/19792/irishgrid-irish-grid-mapping-system</link>
	<title><![CDATA[irishgrid: Irish Grid Mapping System]]></title>
	<description><![CDATA[<p>Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format.</p>
<p>Originally design to map the location of objects in a 10 km map IrishGrid includes:</p>
<ul>
<li>native support of the Irish Grid System (see <a href="http://www.osi.ie/">http://www.osi.ie/</a>)</li>
<li>optimize for speed (there's as less as possible data to conversion)</li>
<li>customized color functions</li>
</ul>
<p>https://code.google.com/p/irishgrid/downloads/detail?name=irishgrid.pl</p><p>Address of the bookmark: <a href="https://code.google.com/p/irishgrid/" rel="nofollow">https://code.google.com/p/irishgrid/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/40463/%E2%80%98dockr%E2%80%99-the-r-container</guid>
	<pubDate>Mon, 23 Dec 2019 09:56:49 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/40463/%E2%80%98dockr%E2%80%99-the-r-container</link>
	<title><![CDATA[‘dockr’: the R container]]></title>
	<description><![CDATA[<p><code>dockr</code> 0.8.6 is now available on CRAN. <code>dockr</code> is a minimal toolkit to build a lightweight Docker container image for your R package, in which the package itself is available. The Docker image seeks to mirror your R session as close as possible with respect to R specific dependencies. Both dependencies on CRAN R packages as well as local non-CRAN R packages will be included in the Docker container image.</p>
<p>If you want to know, how Docker works, and why you should consider using Docker, please take a look at the <a href="https://www.docker.com/why-docker" target="_blank">Docker website</a>.</p><p>Address of the bookmark: <a href="https://www.docker.com/why-docker" rel="nofollow">https://www.docker.com/why-docker</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41169/instructions-for-creating-your-own-r-package</guid>
	<pubDate>Wed, 19 Feb 2020 01:22:48 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41169/instructions-for-creating-your-own-r-package</link>
	<title><![CDATA[Instructions for Creating Your Own R Package]]></title>
	<description><![CDATA[<p>The following is a step-by-step guide to creating your own R package.&nbsp; Even beyond this course, youmay find this useful for storing functions you create for your own research or for editing existingR packages to suit your needs.</p>
<p>This guide contains three different sets of instructions.&nbsp; If you use RStudio, you can follow the &ldquo;Ba-sic Instructions&rdquo; in Section 2 which involve using RStudio&rsquo;s interface.&nbsp; </p><p>Address of the bookmark: <a href="http://web.mit.edu/insong/www/pdf/rpackage_instructions.pdf" rel="nofollow">http://web.mit.edu/insong/www/pdf/rpackage_instructions.pdf</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/view/19838</guid>
	<pubDate>Sat, 27 Dec 2014 13:30:15 -0600</pubDate>
	<link>https://bioinformaticsonline.com/view/19838</link>
	<title><![CDATA[Interview with a bioinformatician series ...]]></title>
	<description><![CDATA[<p>The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. Hopefully these answers will prove useful to others in the field, especially to those who are just starting their bioinformatics careers.<br /><br />This series will be available at BOL every fortnight.<br /><br /><br /><br /></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/42012/phewas-r-package-is-designed-to-provide-an-accessible-interface-to-the-phenome-wide-association-study</guid>
	<pubDate>Thu, 30 Jul 2020 22:06:37 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42012/phewas-r-package-is-designed-to-provide-an-accessible-interface-to-the-phenome-wide-association-study</link>
	<title><![CDATA[PheWAS: R package is designed to provide an accessible interface to the phenome wide association study]]></title>
	<description><![CDATA[<p>The PheWAS R package is designed to provide an accessible interface to the phenome wide association study. For a description of the methods available and some simple examples, please see the&nbsp;<a href="https://github.com/PheWAS/PheWAS/blob/master/inst/doc/PheWAS-package.pdf?raw=true">package vignette</a>&nbsp;or the R documentation. For installation help, see below. ##Installing the PheWAS Package The PheWAS package can be installed using the devtools package. The following code when executed in R will get you started:</p>
<pre><code>install.packages("devtools")
#It may be necessary to install required as not all package dependencies are installed by devtools:
install.packages(c("dplyr","tidyr","ggplot2","MASS","meta","ggrepel","DT"))
devtools::install_github("PheWAS/PheWAS")
library(PheWAS)</code></pre><p>Address of the bookmark: <a href="https://github.com/PheWAS/PheWAS" rel="nofollow">https://github.com/PheWAS/PheWAS</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/19992/binc-examination-2015</guid>
	<pubDate>Mon, 29 Dec 2014 12:23:37 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/19992/binc-examination-2015</link>
	<title><![CDATA[BINC examination 2015 !!!]]></title>
	<description><![CDATA[<p>Pondicherry University,Puducherry,on behalf of Department of Biotechnology, Government of India, will conduct the BINC examination in 2015. The objective of this examination is to certify bioinformatics professionals, trained formally as well as self-trained.Registration for BINC examination 2015 will open soon.</p><p>Pondicherry University Puducherry has been identified as a nodal agency by the Department of Biotechnology, Govt. of India to coordinate this examination along with nine centres namely, Pune University, Pune; Anna University, Chennai; Calcatta University (WBUT) Kolkata; Institute of Bioinformatics &amp; Applied Biotechnology, Bangalore; North-Eastern Hill University, Shillong, University of Hyderabad, Hyderabad; University of Kerala, Thiruvananthapuram; Jawaharlal Nehru University, New Delhi and Assam Agricultural University, Guwahati.</p><p>In the BINC 2013 examination,17 candidates were certified. DBT has agreed to fund Research fellowships for all the BINC qualified Indian nationals to pursue Ph.D. in Indian Institutes/Universities. Note that the candidate must possess a postgraduate degree(or equivalent) &amp; meet the criteria of the institutes/universities in order to avail research fellowship. In addition, cash prize of Rs. 10,000/- will be awarded to the top 10 BINC qualifiers.<br /><br /></p><p>More at http://210.212.230.224:9999/BINC/</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43546/introduction-to-phylogenies-in-r</guid>
	<pubDate>Wed, 13 Oct 2021 02:27:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43546/introduction-to-phylogenies-in-r</link>
	<title><![CDATA[Introduction to phylogenies in R]]></title>
	<description><![CDATA[<p><span>R phylogenetics is built on the contributed packages for phylogenetics in R, and there are many such packages. Let's begin today by installing a few critical packages, such as ape, phangorn, phytools, and geiger. To get the most recent CRAN version of these packages, you will need to have R 3.3.x installed on your computer!</span></p><p>Address of the bookmark: <a href="http://www.phytools.org/Cordoba2017/ex/2/Intro-to-phylogenies.html" rel="nofollow">http://www.phytools.org/Cordoba2017/ex/2/Intro-to-phylogenies.html</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/20448/jrf-in-bioinformatics-nehu</guid>
  <pubDate>Tue, 20 Jan 2015 22:57:49 -0600</pubDate>
  <link></link>
  <title><![CDATA[JRF in Bioinformatics @ NEHU]]></title>
  <description><![CDATA[
<p>Department of Botany &amp; Bioinformatics Centre<br />NORTH-EASTERN HILL UNIVERSITY, SHILLONG 793022</p>

<p>Applications with complete bio-data from candidates possessing the required qualifications are invited for the posts of JRF (2) and Project Assistant (1) in</p>

<p>DBT, GOI-funded research project “Next Generation Sequencing (NGS)- based de novo assembly of expressed transcripts and genome information of Orchids in North-East India” in DBT’s Twinning programme for NE as per DBT sanction order and norms.</p>

<p>(i) JRF(2 nos.):</p>

<p>Qualifications: M.Tech/M.Sc in Life Sciences/ Botany/ Zoology/Biochemistry/ Biotechnology/ Bioinformatics; Desirable: Aptitude for Bioinformatics and Computer Programming/ Next generation sequencing data analysis</p>

<p>(ii) Project Assistant (1 no.):</p>

<p>Qualifications: Graduation in Science, Desirable: Experience of working in a Life Science/Plant Biotechnology lab. and familiarity with computers and field work viz. collection of samples.</p>

<p>The applications through email bicnehu@gmail.com or post must reach the undersigned<br />within 15 days from the date of publication of this advertisement. The advertised posts are purely temporary for the duration of the project and subject to availability of the funds from DBT. The appointment does not confer any entitlement or right over the posts for absorption in the University service.</p>

<p>Advertisement: www.nehu.ac.in/Advertisements/BICAdvtPV_200115.pdf</p>
]]></description>
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