<?xml version='1.0'?><rss version="2.0" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:georss="http://www.georss.org/georss" xmlns:atom="http://www.w3.org/2005/Atom" >
<channel>
	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/29601?offset=1040</link>
	<atom:link href="https://bioinformaticsonline.com/related/29601?offset=1040" rel="self" type="application/rss+xml" />
	<description><![CDATA[]]></description>
	
	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/1178/r-package-for-visualising-go-enrichment</guid>
	<pubDate>Mon, 22 Jul 2013 12:25:09 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/1178/r-package-for-visualising-go-enrichment</link>
	<title><![CDATA[R package for visualising GO enrichment]]></title>
	<description><![CDATA[<p>An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots for analyses such as differential expression or clustering, where for each gene list we display its behaviour in the experiment alongside with its GO annotations.</p><p>Links @ http://raivokolde.github.io/GOsummaries/</p><p>Lab @ http://biit.cs.ut.ee/about/main</p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/22454/one-page-r-survival-guide</guid>
	<pubDate>Thu, 28 May 2015 21:10:12 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/22454/one-page-r-survival-guide</link>
	<title><![CDATA[One page R survival guide !!]]></title>
	<description><![CDATA[<p><span style="font-style: normal; color: #000000; float: none;">There any many of the documents have been developed and tested by scientist around the world. I found this one really useful. The data used is available for download as<span>&nbsp;</span></span><a href="http://onepager.togaware.com/data.zip">data.zip</a><span style="font-style: normal; color: #000000; float: none;">.</span></p><p><span style="font-style: normal; color: #000000; float: none;">Reference@http://www.datasciencecentral.com/profiles/blogs/one-page-r-a-survival-guide-to-data-science-with-r</span></p><ul>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Templates for the Data Scientist<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">A Template for Preparing Data:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/DataO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/DataO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">A Template for Building Models:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/ModelsO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/ModelsO.R">R</a></li>
</ol></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Getting Started as a Data Scientist<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Getting Started with R and Rattle:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/StartL.pdf">Lecture</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/StartG.pdf">Laboratory</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Introducing and Interacting with R:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/IntroRL.pdf">Lecture</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/IntroRR.pdf">Laboratory</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">BasicR - OnePage(R) - Writing R scripts</li>
</ol></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Dealing With Data<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Read Data into R:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/ReadO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/ReadO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Explore and Summarise Data:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/SummaryO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/SummaryO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Transform Data:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/TransformO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/TransformO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><a href="http://togaware.com/onepager/DateTimeRB"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Dealing with Dates and Time:</span></a><span>&nbsp;</span>(<a href="http://onepager.togaware.com/DateTimeR.pdf">PDF</a>,<span>&nbsp;</span><a href="http://onepager.togaware.com/DateTimeR.R">R</a>) Dates and Time</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Visualising Data with GGPlot2:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/GGPlot2O.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/GGPlot2O.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Visualising Data with Maps</span><span>&nbsp;</span>*<a href="http://togaware.com/onepager/MapsO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/MapsO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Spatial<span>&nbsp;</span>(R) Spatial Analysis</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Handling Big Data</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/BigDataO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/BigData.R">R</a></li>
</ol></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Descriptive Analytics<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Cluster Analysis:</span><span>&nbsp;</span>*<a href="http://togaware.com/onepager/ClustersL.pdf">Lecture</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/ClustersO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/Clusters.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Association Analysis:</span><span>&nbsp;</span>*<a href="http://togaware.com/onepager/ARulesL.pdf">Lecture</a></li>
</ol></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Predictive Analytics<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Decision Trees:</span><span>&nbsp;</span>*<a href="http://togaware.com/onepager/DTreesL.pdf">Lecture</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/DTreesO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/DTreesO.R">R</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/DTreesG.pdf">Rattle</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Ensembles of Decision Trees:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/EnsemblesL.pdf">Lecture</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/EnsemblesO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/EnsemblesO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">SVM (R)</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">KernLab (R)</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">NeuralNetworks (R)</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">NNet (R)</li>
</ol></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Model Delivery<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Evaluating Models:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/EvaluationO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/EvaluationO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Evaluation (R)</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Scoring (R)</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">PMML (R) Exporting Models for Deployment</li>
</ol></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Advanced Topics<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Text Mining:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/TextMiningO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/TextMiningO.R">R</a></li>
</ol></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Advanced R Topics<ol style="margin: 0px; padding: 0px 0px 0px 1.5em; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><a href="http://togaware.com/onepager/PlotsB"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Plots</span></a><span>&nbsp;</span>(<a href="http://onepager.togaware.com/Plots.pdf">PDF</a>,<span>&nbsp;</span><a href="http://onepager.togaware.com/Plots.R">R</a>) Miscellaneous Plots</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><a href="http://togaware.com/onepager/FunctionsB"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Functions</span></a><span>&nbsp;</span>(<a href="http://onepager.togaware.com/Functions.pdf">PDF</a>,<span>&nbsp;</span><a href="http://onepager.togaware.com/Functions.R">R</a>) Writing Functions in R</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><a href="http://togaware.com/onepager/ParallelB"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Parallel</span></a><span>&nbsp;</span>(<a href="http://onepager.togaware.com/Parallel.pdf">PDF</a>,<span>&nbsp;</span><a href="http://onepager.togaware.com/Parallel.R">R</a>) Parallel Execution</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Packaging (R) Pulling it Together into a Package</li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Doing R with Style:</span><span>&nbsp;</span>*<a href="http://onepager.togaware.com/StyleO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/StyleO.R">R</a></li>
<li style="margin: 0px; padding: 0px; border: 0px currentColor; font-style: inherit; font-weight: inherit; vertical-align: baseline;"><span style="margin: 0px; padding: 0px; border: 0px none currentcolor; font-style: inherit; font-weight: inherit; vertical-align: baseline;">Literate Data Mining with KnitR:</span><span>&nbsp;</span>*<a href="http://togaware.com/onepager/KnitRL.pdf">Lecture</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/KnitRO.pdf">OnePageR</a><span>&nbsp;</span>- *<a href="http://onepager.togaware.com/KnitRO.R"></a></li>
</ol></li>
</ul>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/18384/big-genomic-data-on-google-cloud-platform</guid>
	<pubDate>Fri, 17 Oct 2014 02:16:00 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/18384/big-genomic-data-on-google-cloud-platform</link>
	<title><![CDATA[Big genomic data on Google Cloud Platform]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/ExNxi_X4qug" frameborder="0" allowfullscreen></iframe>As the cost of DNA sequencing has dropped, the volume of data produced has risen into the petabytes. Google is working with the genomics community to define a standard API for working with big genomic data sets in the cloud. Building on Google Cloud Platform, we show how to store, process, explore and share genomic data using technologies like BigQuery, AppEngine MapReduce, R and more.]]></description>
	
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/34041/r-tuorial</guid>
	<pubDate>Mon, 31 Jul 2017 08:41:40 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/34041/r-tuorial</link>
	<title><![CDATA[R tuorial]]></title>
	<description><![CDATA[<p>R learning resources</p>
<p>https://flowingdata.com/</p><p>Address of the bookmark: <a href="https://flowingdata.com/" rel="nofollow">https://flowingdata.com/</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/18579/cluster-innovation-center-university-of-delhi</guid>
  <pubDate>Wed, 22 Oct 2014 10:39:49 -0500</pubDate>
  <link></link>
  <title><![CDATA[CLUSTER INNOVATION CENTER @ UNIVERSITY OF DELHI]]></title>
  <description><![CDATA[
<p>Applications for Pre-selection of  candidates under ‘Institutions Mode’ for DST-ISPIRE Faculty in  Computational Biology/ Systems Biology/ Bioinformatics</p>

<p>Applications are invited for pre-selection  of candidates for Ministry of Science and Technology, Department of Science and Technology INSPIRE Faculty Scheme: a component of “Assured Opportunity for Research Career (AORC)” under INSPIRE in the area of computational Biology/Systems Biology/Bioinformatics.</p>

<p>Candidates having done their B.Tech/B.E.  and or M.Sc./M.Tech in Computer Science or Biotechnology and Ph.D. in Systems/ Computational Biology or Bioinformatics may apply in the following format prescribed by DST to the Director, Cluster Innovation Center, University Stadium, GC Narang Marg, University of Delhi, Delhi -11107. Detials of other qualification, age limits etc., please visit www.inspire-dst.gov.in.</p>

<p>Application on the prescribed format may be submitted by email to director@cic.du.ac.in before October 25, 2014. Selected candidates shall be called for an interview. The date, time and venue of the interview shall be informed by email/telephone. For more information about Cluster Innovation Center, please visit https://ducic.ac.in.</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/34585/r-googlevis-examples</guid>
	<pubDate>Sun, 10 Dec 2017 06:13:42 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/34585/r-googlevis-examples</link>
	<title><![CDATA[R googleVis examples]]></title>
	<description><![CDATA[<p>It may take a little while to load all charts. Please be patient. All charts require an Internet connection.</p>
<p>These examples are taken from the googleVis demo. You can execute the demo via</p>
<pre><code><span>library</span><span>(</span><span>googleVis</span><span>)</span>
<span>demo</span><span>(</span><span>googleVis</span><span>)</span>
</code></pre>
<p>For more details about the charts and further examples see the helpfiles of the individual googleVis function and review the&nbsp;<a href="https://developers.google.com/chart/interactive/docs/gallery">Google Charts API documentation</a>&nbsp;and&nbsp;<a href="https://developers.google.com/terms">Terms of Service</a>.</p><p>Address of the bookmark: <a href="https://cran.r-project.org/web/packages/googleVis/vignettes/googleVis_examples.html" rel="nofollow">https://cran.r-project.org/web/packages/googleVis/vignettes/googleVis_examples.html</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/19059/ipython-interactive-notebooks</guid>
	<pubDate>Fri, 07 Nov 2014 12:07:02 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/19059/ipython-interactive-notebooks</link>
	<title><![CDATA[IPython: Interactive notebooks]]></title>
	<description><![CDATA[<p>The IPython Notebook is a web-based interactive computational environment where you can combine code execution, text, mathematics, plots and rich media into a single document.</p><p>These notebooks are normal files that can be shared with colleagues, converted to other formats such as HTML or PDF, etc. You can share any publicly available notebook by using the IPython Notebook Viewer service which will render it as a static web page. This makes it easy to give your colleagues a document they can read immediately without having to install anything.</p><p><img src="http://ipython.org/_images/9_home_fperez_prof_grants_1207-sloan-ipython_proposal_fig_ipython-notebook-specgram.png" width="985" height="916" alt="image" style="border: 0px;"><br /><br />To learn more about using the IPython Notebook, you can visit our example collection, and you can read the documentation for all the details on how to use and configure the system. The Notebook Gallery showcases many interesting notebooks covering a variety of topics, from basic programming to advanced scientific computing.</p><p>&nbsp;</p><p>More http://www.nature.com/news/interactive-notebooks-sharing-the-code-1.16261</p><p>http://ipython.org/ipython-doc/1/interactive/notebook.html</p><p>Reference http://ipython.org/notebook.html</p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/36585/custom-r-charts-coming-to-excel</guid>
	<pubDate>Sat, 12 May 2018 07:30:28 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/36585/custom-r-charts-coming-to-excel</link>
	<title><![CDATA[Custom R charts coming to Excel !]]></title>
	<description><![CDATA[<p>This week at the BUILD conference, Microsoft&nbsp;<a href="https://dev.office.com/blogs/azure-machine-learning-javascript-custom-functions-and-power-bi-custom-visuals-further-expand-developers-capabilities-with-excel" target="_blank">announced</a>&nbsp;that Power BI custom visuals will soon be available as charts with Excel. You'll be able to choose a range of data within an Excel workbook, and pass those data to one of the built-in Power BI custom visuals, or one you've&nbsp;<a href="https://github.com/Microsoft/PowerBI-Visuals/" target="_blank">created yourself using the API</a>.</p><p><a href="http://a0.typepad.com/6a0105360ba1c6970c0224e038fa08200d-pi" target="_blank"><img src="https://www.r-bloggers.com/wp-content/plugins/lazy-load/images/1x1.trans.gif" alt="Excel custom visuals" title="Excel custom visuals" style="border: 0px; border: 0px;"></a></p><p>Since you can&nbsp;<a href="https://docs.microsoft.com/en-us/power-bi/desktop-r-visuals?WT.mc_id=Revolutions-blog-davidsmi" target="_blank">create Power BI custom visuals using R</a>, that means you'll be able to design a custom R-based chart, and make it available to people using Excel &mdash; even if they don't know how to use R themselves. There also many&nbsp;<a href="https://appsource.microsoft.com/en-us/marketplace/apps?product=power-bi-visuals&amp;page=1&amp;src=office" target="_blank">pre-defined custom visuals available</a>, including some familiar R charts like&nbsp;<a href="https://appsource.microsoft.com/en-us/product/power-bi-visuals/WA104380817?tab=Overview" target="_blank">decision trees</a>,&nbsp;<a href="https://appsource.microsoft.com/en-us/product/power-bi-visuals/WA104380905?tab=Overview" target="_blank">calendar heatmaps</a>, and&nbsp;<a href="https://appsource.microsoft.com/en-us/product/power-bi-visuals/WA104381492?tab=Overview" target="_blank">hexbin scatterplots</a>.</p><p>For more details on how you'll be able to use custom R visuals in Excel, check out the blog post linked below.</p><p>PowerBI Blog:&nbsp;<a href="https://powerbi.microsoft.com/en-us/blog/excel-announces-new-data-visualization-capabilities-with-power-bi-custom-visuals/" target="_blank">Excel announces new data visualization capabilities with Power BI custom visuals</a></p>]]></description>
	<dc:creator>Surabhi Chaudhary</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/38067/metaplotr-a-perlr-pipeline-for-plotting-metagenes-of-nucleotide-modifications-and-other-transcriptomic-sites</guid>
	<pubDate>Mon, 05 Nov 2018 08:12:45 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/38067/metaplotr-a-perlr-pipeline-for-plotting-metagenes-of-nucleotide-modifications-and-other-transcriptomic-sites</link>
	<title><![CDATA[MetaPlotR: a Perl/R pipeline for plotting metagenes of nucleotide modifications and other transcriptomic sites]]></title>
	<description><![CDATA[<p><span>An increasing number of studies are mapping protein binding and nucleotide modifications sites throughout the transcriptome. Often, these sites cluster in certain regions of the transcript, giving clues to their function. Hence, it is informative to summarize where in the transcript these sites occur. A metagene is a simple and effective tool for visualizing the distribution of sites along a simplified transcript model. In this work, we introduce MetaPlotR, a Perl/R pipeline for creating metagene plots.</span></p><p>Address of the bookmark: <a href="https://github.com/olarerin/metaPlotR" rel="nofollow">https://github.com/olarerin/metaPlotR</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/19161/niab-molecular-biologybioinformatics-scientistra-openings</guid>
  <pubDate>Thu, 13 Nov 2014 13:37:27 -0600</pubDate>
  <link></link>
  <title><![CDATA[NIAB Molecular Biology/Bioinformatics Scientist/RA Openings]]></title>
  <description><![CDATA[
<p>D. No. 1-121/1, 4th and 5th Floors, Axis Clinicals Building, Miyapur, Hyderabad, Telangana, India- 500 049</p>

<p>Email: admin@niab.org.in Telephones: +91 40 2304 9403 Telefax: +91 40 2304 2740<br />Advertisement No: 5/2014</p>

<p>About NIAB National Institute of Animal Biotechnology (NIAB), Hyderabad, an autonomous institute under the aegis of Department of Biotechnology, Government of India, is aimed to harness novel and emerging biotechnologies and create knowledge in the cutting edge areas for improving animal health and productivity.</p>

<p>Applications are invited for the following temporary research positions to work in ongoing DBTBBSRC sponsored research project entitled “Transcriptome Analysis in Indian buffalo and the Genetics of Innate Immunity” at the National Institute of Animal Biotechnology, Hyderabad.</p>

<p>(A) Project Scientist – Level B (One Position)</p>

<p>Emoluments: Rs. 15600 + GP Rs. 5400 + 30 % HRA p.m. (Total emoluments will be Rs. 49,770/-p.m. for the duration of the project)</p>

<p>Essential Qualification: Candidates having M.V.Sc. in Veterinary Microbiology / Veterinary Pathology / Veterinary Public Health / Ph.D. degree in Life Sciences, Biotechnology, Molecular Biology or any other related field from the recognized university are eligible to apply.</p>

<p>The candidate should have a good academic record and research experience as evidenced from published in standard referred journals / patents.</p>

<p>Desirable: Candidates having research experience in the area of tissue culture, genomics, Transcriptomics and Advanced Molecular Biology will be given preference.</p>

<p>Age Limit: Not exceeding 30 years as on last date of the submission of the application.</p>

<p>(B) Research Associate in Bioinformatics (One position)</p>

<p>Fellowship: Rs. 22,000 + 30 % HRA</p>

<p>Essential Qualification: Candidates having Ph.D. degree or M.Tech. with three years of<br />experience in Bioinformatics, Computational Biology, Biotechnology, Life Sciences or any other related field are eligible to apply.</p>

<p>Desirable: Candidate having research experience in the area of next generation sequencing (NGS) data analysis, Genome wide association studies, Genomic selection, advance genomic data analysis etc., will be given preference. The candidate should have a good academic record and research experience as evidenced from published papers in standard journals / patents.</p>

<p>Age Limit: Not exceeding 30 years as on last date of the submission of the application.</p>

<p>Project Duration: The duration of the project is Three years and the positions are co- terminus with the duration of the project. (Initial appointment will be for one year and further extension will be granted based on annual review).</p>

<p>Mode of submission of application: Only online applications are to be submitted through<br />www.niab.org.in on or before 08 December, 2014. Link for online submission of applications will be available from 10 November 2014.</p>

<p>Advertisement: www.niab.org.in/Notifications/Advt_5_2014/Advt_5_2014.pdf</p>
]]></description>
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