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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/29601?offset=1050</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/36100/bioinformatics-postdoctoral-position-at-csir-institute-of-himalayan-bioresource-technology-palampur-hp</guid>
  <pubDate>Thu, 05 Apr 2018 06:57:17 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics postdoctoral position at CSIR - Institute of Himalayan Bioresource Technology, Palampur (H.P.)]]></title>
  <description><![CDATA[
<p>Walk-in-Interview is scheduled to be held on the date as mentioned below for selection of Suitable candidates in the following areas under the  DBT sponsored projecT on purely temporary basis for the duration of the project(s) or till completion of projects whichever is earlier:</p>

<p>Project Title:<br />"Exploration of RBP-RNA interactions to reveal the post-transcriptional regulatory impact, and development of related tools and resource server".</p>

<p>Position: Research Associate (1 position)<br />Age : 35 years as on 02.05.2018<br />Salary : Rs.36,000/- P.M. + H.R.A.</p>

<p>as per the funds provisions in the respective projects.</p>

<p>Eligibility Criteria : <br />Essential Qualifications: Ph.D. in any area of Bioinformatics/ Computational Biology/ Life Sciences.<br />Desirable: Candidate having experience in Bioinformatics will be preferred.</p>

<p>Or</p>

<p>Essential Qualifications: M.Tech. in Bioinformatics/ Computation Biology/ Computer Science or any related area with 3 years of research experience.</p>

<p>Selection Procedure : Walk In Interview</p>

<p>Date :	02 May, 2018<br />Time :	9:30 A.M.<br />Venue : CSIR-IHBT Palampur (H.P.)</p>

<p>For more info refer to following doc:</p>

<p>http://ihbt.res.in/components/com_chronoforms5/chronoforms/uploads/Recruitment/20180404125233_AdvtNo11_2018.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/2334/binc-bioinformatics-national-certification-website-address</guid>
	<pubDate>Wed, 14 Aug 2013 09:40:22 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/2334/binc-bioinformatics-national-certification-website-address</link>
	<title><![CDATA[BINC (BioInformatics National Certification) Website address]]></title>
	<description><![CDATA[<p><span>BINC (BioInformatics National Certification) is an initiative of Department of Biotechnology(DBT), Government Of India in coordination with Bioinformatics Center, University of Pune. The objective of the examination is to recognize trained manpower in the area of Bioinformatics. Currently, various Indian universities, Government and private institutions are involved in imparting courses in Bioinformatics in India.</span></p>
<p>Foreign nationals intending to have certification are eligible to appear for BINC examination.<br>Minimum qualification includes a degree from a recognized university/institute in the areas listed in FAQ.<br>Formal training in the area of Bioinformatics is not a prerequisite.<br>Note that the foreign students will only be certified by DBT and are not eligible for the cash award as well as junior research fellowship.</p><p>Address of the bookmark: <a href="http://binc.scisjnu.ernet.in/" rel="nofollow">http://binc.scisjnu.ernet.in/</a></p>]]></description>
	<dc:creator>Kamalakshi Mukherjee</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/36674/bioinformatics-project-assistant-level-ii-position-at-csir-institute-of-himalayan-bioresource-technology-palampur-hp</guid>
  <pubDate>Thu, 17 May 2018 01:53:17 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Project Assistant Level II position at CSIR - Institute of Himalayan Bioresource Technology, Palampur (H.P.)]]></title>
  <description><![CDATA[
<p>Walk-in-Interview is scheduled to be held on the date as mentioned below for selection of Suitable candidates in the following areas under the DBT sponsored project on purely temporary basis for the duration of the project(s) or till completion of projects whichever is earlier:</p>

<p>Project Title:<br />"Exploration of RBP-RNA interactions to reveal the post-transcriptional regulatory impact, and development of related tools and resource server".</p>

<p>Position: Project Assistant Level II (1 position)<br />Age : 28 years as on 14.06.2018<br />Salary : Rs.25,000/- P.M.</p>

<p>as per the funds provisions in the respective projects.</p>

<p>Eligibility Criteria : <br />Essential Qualifications: M.Sc. in Bioinformatics / Computational Biology or any area of Bioinformatics with 55% marks.</p>

<p>OR</p>

<p>Essential Qualifications: M.Sc. in any area of Life Sciences with 55% marks with Diploma in any area of Bloinformatics.</p>

<p>OR</p>

<p>Essential Qualifications: B.Tech. / M.Tech. in Bioinformatics / Computer Science with 55% marks.</p>

<p>Selection Procedure : Walk In Interview</p>

<p>Date :	14 June, 2018<br />Time :	9:30 A.M.<br />Venue : CSIR-IHBT Palampur (H.P.)</p>

<p>For more info refer to following doc:</p>

<p>http://ihbt.res.in/components/com_chronoforms5/chronoforms/uploads/Recruitment/20180516114701_Advt15_2018.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/38487/betsy-a-new-backward-chaining-expert-system-for-automated-development-of-pipelines-in-bioinformatics</guid>
	<pubDate>Mon, 17 Dec 2018 18:46:51 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/38487/betsy-a-new-backward-chaining-expert-system-for-automated-development-of-pipelines-in-bioinformatics</link>
	<title><![CDATA[BETSY: A new backward-chaining expert system for automated development of pipelines in Bioinformatics]]></title>
	<description><![CDATA[<p>The BETSY provides a command-line interface and available at&nbsp;<a href="https://github.com/jefftc/changlab">https://github.com/jefftc/changlab</a>. A user first searches in the knowledge base for desired output and then BETSY develops an initial workflow to produce that data which is later examined by the user. The user can optimize the parameters, the algorithm to preprocess the data, and normalize it depending on the task.</p>
<p>Currently, BETSY consists of modules required for the microarray and next-generation sequencing data [4] such as expression analysis, classification, peak calling, and visualization.</p><p>Address of the bookmark: <a href="https://github.com/jefftc/changlab" rel="nofollow">https://github.com/jefftc/changlab</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/2573/most-commonly-used-awk-by-bioinformatician</guid>
	<pubDate>Mon, 19 Aug 2013 01:12:38 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/2573/most-commonly-used-awk-by-bioinformatician</link>
	<title><![CDATA[Most Commonly used Awk by Bioinformatician]]></title>
	<description><![CDATA[<p style="text-align: center;">&nbsp;</p><p>Awk is a programming language that is specifically designed for quickly manipulating space delimited data. Although you can achieve all its functionality with Perl, awk is simpler in many practical cases.</p><p>Why awk? You can replace a pipeline of 'stuff | grep | sed | cut...' with a single call to awk. For a simple script, most of the timelag is in loading these apps into memory, and it's much faster to do it all with one. This is ideal for something like an openbox pipe menu where you want to generate something on the fly. You can use awk to make a neat one-liner for some quick job in the terminal, or build an awk section into a shell script. You can find a lot of online tutorials, but here I will only show a few examples which cover most of bioinformatician daily uses of awk.</p><p>choose rows where column 3 is larger than column 5:</p><p>awk '$3&gt;$5' input.txt &gt; output.txt</p><p>extract column 2,4,5:</p><p>awk '{print $2,$4,$5}' input.txt &gt; output.txt</p><p>awk 'BEGIN{OFS="\t"}{print $2,$4,$5}' input.txt</p><p>show rows between 20th and 80th:</p><p>awk 'NR&gt;=20&amp;&amp;NR&lt;=80' input.txt &gt; output.txt</p><p>calculate the average of column 2:</p><p>awk '{x+=$2}END{print x/NR}' input.txt</p><p>regex (egrep):</p><p>awk '/^test[0-9]+/' input.txt</p><p>calculate the sum of column 2 and 3 and put it at the end of a row or replace the first column:</p><p>awk '{print $0,$2+$3}' input.txt</p><p>awk '{$1=$2+$3;print}' input.txt</p><p>join two files on column 1:</p><p>awk 'BEGIN{while((getline&lt;"file1.txt")&gt;0)l[$1]=$0}$1 in l{print $0"\t"l[$1]}' file2.txt &gt; output.txt</p><p>count number of occurrence of column 2 (uniq -c):</p><p>awk '{l[$2]++}END{for (x in l) print x,l[x]}' input.txt</p><p>apply "uniq" on column 2, only printing the first occurrence (uniq):</p><p>awk '!($2 in l){print;l[$2]=1}' input.txt</p><p>count different words (wc):</p><p>awk '{for(i=1;i!=NF;++i)c[$i]++}END{for (x in c) print x,c[x]}' input.txt</p><p>deal with simple CSV:</p><p>awk -F, '{print $1,$2}'</p><p>substitution (sed is simpler in this case):</p><p>awk '{sub(/test/, "no", $0);print}' input.txt</p><p>&nbsp;</p><p>OK now here's where to read this stuff properly explained. roll</p><p>Two thorough tutorials:</p><p>http://www.gnu.org/software/gawk/manual/gawk.html</p><p>http://www.grymoire.com/Unix/Awk.html</p><p>A famous list of useful one-liners - though they're short, many are quite tricky:</p><p>http://www.pement.org/awk/awk1line.txt</p><p>And some nice explanations of those one-liners. After reading this you'll have a pretty good grasp!</p><p>http://www.catonmat.net/blog/awk-one-li &hellip; -part-one/</p><p>http://www.catonmat.net/blog/ten-awk-ti &hellip; -pitfalls/</p>]]></description>
	<dc:creator>Neel</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/39603/tenure-track-position-in-bioinformatics-at-institute-of-neurobiology-unam-queretaro-mexico</guid>
  <pubDate>Mon, 10 Jun 2019 00:48:54 -0500</pubDate>
  <link></link>
  <title><![CDATA[Tenure Track position in Bioinformatics at Institute of Neurobiology, UNAM, Querétaro, México]]></title>
  <description><![CDATA[
<p>The Institute of Neurobiology UNAM (www.inb.unam.mx) offers a tenure-track position at the level of Assistant Professor (Investigador Asociado C) to develop an original research program in Bioinformatics with applications to neuroscience and to establish multidisciplinary collaboration with other members of the Institute. Applicants are expected to have a doctorate degree, postdoctoral experience related to bioinformatics or genome biology, and a strong track record of peer-reviewed publications. No previous experience in neuroscience is required.</p>

<p>Interested applicants must submit CV and addresses of three references to ataulfo@unam.mx.</p>

<p>Tenure Track position in Genomic Sciences  </p>

<p>Laboratorio Internacional de Investigación sobre el Genoma Humano, UNAM Juriquilla, Querétaro, México </p>

<p>The International Laboratory for Human Genome Research, LIIGH-UNAM (www.liigh.unam.mx) offers a tenure-track position at the level of Assistant Professor (Investigador Asociado C) to perform research, teaching and formation of human resources in the area of: “Genomics of Mendelian Diseases” </p>

<p>Applicants are expected to have a doctorate degree, postdoctoral experience related to the above mentioned area and a strong track record of peer-reviewed publications. Interested applicants must submit CV, email addresses of three references, and a three-page project to Dr. Rafael Palacios, Coordinator of LIIGH-UNAM (palacios@liigh.unam.mx) before June 21, 2019 ………………………………………………………………</p>

<p>Tenure Track position in Genomic Sciences </p>

<p>Laboratorio Internacional de Investigación sobre el Genoma Humano, UNAM Juriquilla, Querétaro, México </p>

<p>The International Laboratory for Human Genome Research, LIIGH-UNAM (www.liigh.unam.mx) offers a tenure-track position at the level of Assistant Professor (Investigador Asociado C) to perform research, teaching and formation of human resources in the area of: “Statistic Population Genomics and its Impact in Complex Diseases” </p>

<p>Applicants are expected to have a doctorate degree, postdoctoral experience related to the above mentioned area and a strong track record of peer-reviewed publications. Interested applicants must submit CV, email addresses of three references, and a three-page statement of research interests to Dr. Rafael Palacios, Coordinator of LIIGH-UNAM (palacios@liigh.unam.mx) before June 21, 2019</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/4106/phd-at-national-institute-for-research-in-reproductive-health</guid>
  <pubDate>Fri, 30 Aug 2013 04:50:35 -0500</pubDate>
  <link></link>
  <title><![CDATA[PhD at National Institute for Research in Reproductive Health]]></title>
  <description><![CDATA[
<p>National Institute for Research in Reproductive Health</p>

<p>(Indian Council of Medical Research )<br />Jehangir Merwanji Street, Parel, Mumbai 400 012</p>

<p>Advertisement No. 1/NIRRH/Ph.D. 2013<br />Admission to Ph.D. Programme – 2013</p>

<p>National Institute for Research in Reproductive Health, Mumbai, a premier institute of the Indian Council of Medical Research, conducts basic, clinical and operational research in different areas of reproductive health. The thrust areas of research include: Fertility Regulation, Infertility and Reproductive Disorders, Reproductive Tract Infections, Maternal and Child Health, Osteoporosis, Genetic Disorders, Stem Cell Biology, Structural Biology, Bioinformatics and Reproductive Toxicology. Institute is affiliated to the University of Mumbai for the award of Ph.D. degree in Applied Biology, Biochemistry, Life Sciences and Biotechnology. The institute invites applications from young and bright students for enrollment in Ph.D. programme.</p>

<p>More at http://www.nirrh.res.in/announcements/phd_program_2013.htm</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/2742/baumbach-lab</guid>
  <pubDate>Wed, 21 Aug 2013 10:56:35 -0500</pubDate>
  <link></link>
  <title><![CDATA[Baumbach Lab]]></title>
  <description><![CDATA[
<p>The Computational Biology research group was established in October 2012 at the Department of Mathematics and Computer Science (IMADA) at the University of Southern Denmark (SDU). It emerged from the Computational Systems Biology group, founded in March 2010 at the Max Planck Institute for Informatics (MPII) and the Cluster of Excellence for Multimodel Computing and Interaction (MMCI) at Saarland University, Saarbrücken, Germany.<br />​<br />The group is headed by Prof. Dr. Jan Baumbach and currently hosts nine PhD students and one postdoctoral fellow at both, IMADA/SDU and MMCI/MPII.</p>

<p>More at &gt;&gt; http://www.baumbachlab.net/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/41924/senior-scientist-bioinformatics-it-at-regional-centre-for-biotechnology</guid>
  <pubDate>Tue, 30 Jun 2020 22:04:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[Senior Scientist (Bioinformatics/ IT) at Regional Centre for Biotechnology]]></title>
  <description><![CDATA[
<p>Regional Centre for Biotechnology</p>

<p>An Institution of National Importance established by Dept. of<br />Biotechnology, Govt. of India Under the auspices of UNESCO</p>

<p>Advertisement No. RCB/IBDC/01/2020/Recruitment/HR</p>

<p>Recruitment For Contractual Positions Under The Project<br />Indian Biological Data Centre (IBDC) Phase-1</p>

<p>Regional Centre for Biotechnology (RCB) invites online applications from suitably qualified, dynamic, result-oriented and dedicated candidates for the following positions under the project Indian Biological Data Centre (BIDC) Phase-1 on contract basis:</p>

<p>Industry: Biotechnology</p>

<p>Location: Faridabad (Haryana, India)</p>

<p>Project Head - 1</p>

<p>Senior Scientist (Bioinformatics/ IT) - 1</p>

<p>For other details, visit: www.rcb.res.in. Last date for receipt of online application is 18th July 2020.</p>

<p>Registrar</p>

<p>Regional Centre for Biotechnology<br />Faridabad-Gurgaon Expressway,<br />Faridabad - 121001</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/3967/research-project-posts-for-csir-project-delhi</guid>
  <pubDate>Tue, 27 Aug 2013 04:31:41 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Project Posts for CSIR Project, Delhi]]></title>
  <description><![CDATA[
<p>Positions Open For Temporary Research Project Posts for CSIR Project, Delhi<br />CSIR is looking for bright young candidates to get involved in building algorithms and platforms for large biological data analyses in the areas of comparative genomics, computational workflows, disease association studies, simulating virtual organelles, etc. Anyone who fulfills the eligibility criteria mentioned below may appear for a walk-in interview on 3rd September 2013 at CSIR Headquarters, Anusandhan Bhawan, 2 Rafi Marg, Delhi – 110001.<br />you can go to link for details or download PDF</p>

<p>http://www.csir.res.in/External/Heads/aboutcsir/announcements/ProjectPost_130813.pdf</p>
]]></description>
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