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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/29638?offset=1250</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26955/jrf-bioinformatics-at-nipgr</guid>
  <pubDate>Thu, 14 Apr 2016 13:12:42 -0500</pubDate>
  <link></link>
  <title><![CDATA[JRF Bioinformatics at NIPGR]]></title>
  <description><![CDATA[
<p>JRF Bioinformatics job position in National Institute of Plant Genome Research (NIPGR)</p>

<p>Title : “Short-Term Research Fellowship”</p>

<p>Qualification : Candidates having M.Sc./M.Tech degree (with minimum of 60% marks overall) or equivalent in Bioinformatics/Biotechnology or any other related field, are eligible to apply. Candidate having prior experience in the area of next-generation sequencing data analysis, bioinformatics, molecular analysis of plant genes, and structural data analysis will be preferred.</p>

<p>No.of Post : 01<br />How to apply</p>

<p>Application should sent to Dr. Gitanjali Yadav, Staff Scientist-IV, National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, P.O. Box NO. 10531, New Delhi - 110067 on or before 26th April 2016</p>

<p>More at http://www.nipgr.res.in/careers/vacancies_latest.php#</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/31523/research-associate-bioinformatics-recruitment-in-national-bureau-of-plant-genetic-resources</guid>
  <pubDate>Fri, 10 Mar 2017 06:50:51 -0600</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics recruitment in National Bureau of Plant Genetic Resources]]></title>
  <description><![CDATA[
<p>Name of Project  : Indo-UK Centre for improvement of Nitrogen use efficiency in wheat Dr. Soma S. Marla, Pr. Scientist (Bioinformatics), Division of Genomic Resources, ICAR, NBPGR, ND. </p>

<p>No. of Post : 01</p>

<p>Qualification : A doctoral (Ph.D). Degree in Bioinformatics OR 1. Masters degree in Bioinformatics or Computer Sciences having 1st division or 60% marks or equivalent overall grade point with at least two years of research experience as evidenced from Fellowship/ Associate ship. 2. NET or equivalent national level examination qualification is essential for the candidates with 3+2 years (B.Sc.+ M.Sc) pattern. Desirable: Demonstrated experience &amp; skills in database design, management, UNIX OS, HPC environment inbased NGS data analysis. Experience substantiated by publications of high quality will be preferred.</p>

<p>Emoluments : Rs. 40,000 (Ph.D)/ Rs + 30 % HRA; 38,000 (Masters) Degree + 30 % HRA.<br />Hiring Process : Walk - In<br />Job Role: Research/JRF/SRF</p>

<p>Candidates should appear by 10.00 AM on 16.03.2016 for registration with relevant documents in the room B4, Bioinformatics Lab, ICAR.NBPGR. old campus, Inderpuri, New Delhi.</p>

<p>The candidates who wish to attend the walk-in interview are requested to bring with them five copies of the CV (one copy with photograph) as per the format given below. Also, the candidates should bring the original documents such as DOB, degree certificates, marks sheets, publications, thesis, experience certificate etc. for verification.</p>

<p>http://www.nbpgr.ernet.in/Downloadfile.aspx?EntryId=7284</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27240/bioinformatics-tutor-at-pgimer</guid>
  <pubDate>Wed, 04 May 2016 08:40:26 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Tutor at PGIMER]]></title>
  <description><![CDATA[
<p>Postgraduate Institute of Medical Education and Research (PGIMER) - Chandigarh, Chandigarh<br />₹9,300 - ₹34,800 a month<br />Postgraduate Institute of Medical Education and Research (PGIMER), Chandigarh invites Online Applications for recruitment of following Group 'A', 'B' and 'C' posts. The closing date for submission of online applications is up to 12th May 2016.</p>

<p>No of Vacancies: 01<br />Pay Scale: Rs. 9300-34800 + Grade Pay Rs. 4600/-</p>

<p>Educational Qualification and Experience: (From Recognized University / Institute) M.Sc. in Biotechnology, Molecular Biology, Human Genomics / Biochemistry / Biophysics.</p>

<p>Age Limit: 18-50 years</p>

<p>Please see Detailed Advertisement Link for full info: https://drive.google.com/file/d/0Bz3xO6e_7OeeZllINnRyWlN5UFE/view</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27291/summer-internship-positions-at-dupont</guid>
  <pubDate>Wed, 11 May 2016 08:05:54 -0500</pubDate>
  <link></link>
  <title><![CDATA[Summer internship positions at DuPont]]></title>
  <description><![CDATA[
<p>DuPont Industrial Biosciences has several summer internship positions<br />for undergrads available. We are looking for driven and creative interns<br />to conduct research in the following areas:</p>

<p>· Enzyme immobilization supports for select enzyme systems.</p>

<p>· New tools for microbial strain and genome engineering using<br />state-of-the-art methodologies.</p>

<p>· Rapid high throughput assays to screen microorganisms from various<br />sources for enzymatic activities of interest.</p>

<p>· High throughput combinatorial approaches to the formulation of growth<br />media in support of microbial enrichments, strain isolations and growth<br />optimization.</p>

<p>· Meta-transcriptomics for the discovery of new enzymes.</p>

<p>· Strain adaptation techniques in defined chemostat environments for<br />microbial strain development.</p>

<p>The internships are based at the Experimental Station R&amp;D Center in<br />Wilmington, DE.</p>

<p>If interested, apply fast!</p>

<p>For more information and to apply, go to:</p>

<p>http://careers.dupont.com/jobsearch/job-details/industrial-biosciences-summer-internship/008549W-10/</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/27321/slurm-basics</guid>
	<pubDate>Fri, 13 May 2016 04:42:24 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/27321/slurm-basics</link>
	<title><![CDATA[SLURM basics !]]></title>
	<description><![CDATA[<p><a href="http://bioinformaticsonline.com/bookmarks/view/27238/slurm" target="_blank">SLURM</a> is a queue management system and stands for Simple Linux Utility for Resource Management. SLURM was developed at the Lawrence Livermore National Lab and currently runs some of the largest compute clusters in the world.</p><p>SLURM is similar in many ways to most other queue systems. You write a batch script then submit it to the queue manager. The queue manager then schedules your job to run on the queue (or partition in SLURM parlance) that you designate. Below we will provide an outline of how to submit jobs to SLURM, how SLURM decides when to schedule your job and how to monitor progress.</p><p>SLURM has a number of valuable features compared to other job management systems:</p><ul>
<li><em>Kill and Requeue</em> SLURM&rsquo;s ability to kill and requeue is superior to that of other systems. It waits for jobs to be cleared before scheduling the high priority job. It also does kill and requeue on memory rather than just on core count.</li>
<li><em>Memory</em> Memory requests are sacrosanct in SLURM. Thus the amount of memory you request at run time is guaranteed to be there. No one can infringe on that memory space and you cannot exceed the amount of memory that you request.</li>
<li><em>Accounting Tools</em> SLURM has a back end database which stores historical information about the cluster. This information can be queried by the users who are curious about how much resources they have used.</li>
</ul><p><strong>Summary of SLURM commands</strong></p><p>The table below shows a summary of SLURM commands. These commands are described in more detail below along with links to the SLURM doc site.</p><table>
<tbody>
<tr><th>&nbsp;</th><th>SLURM</th><th>SLURM Example</th></tr>
<tr>
<td>Submit a batch serial job</td>
<td><a href="http://slurm.schedmd.com/sbatch.html">sbatch</a></td>
<td><code>sbatch runscript.sh</code></td>
</tr>
<tr>
<td>Run a script interatively</td>
<td><a href="http://slurm.schedmd.com/srun.html">srun</a></td>
<td><code>srun --pty -p interact -t 10 --mem 1000 /bin/bash /bin/hostname</code></td>
</tr>
<tr>
<td>Kill a job</td>
<td><a href="http://slurm.schedmd.com/scancel.html">scancel</a></td>
<td><code>scancel 999999</code></td>
</tr>
<tr>
<td>View status of queues</td>
<td><a href="http://slurm.schedmd.com/squeue.html">squeue</a></td>
<td><code>squeue -u akitzmiller</code></td>
</tr>
<tr>
<td>Check current job by id</td>
<td><a href="http://slurm.schedmd.com/squeue.html">sacct</a></td>
<td><code>sacct -j 999999</code></td>
</tr>
</tbody>
</table>]]></description>
	<dc:creator>Radha Agarkar</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27461/maftools</guid>
	<pubDate>Sat, 21 May 2016 22:40:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27461/maftools</link>
	<title><![CDATA[mafTools]]></title>
	<description><![CDATA[<p><span>Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.</span></p><p>Address of the bookmark: <a href="https://github.com/dentearl/mafTools" rel="nofollow">https://github.com/dentearl/mafTools</a></p>]]></description>
	<dc:creator>Radha Agarkar</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27473/project-assistantjunior-research-fellow-position-at-centre-of-biomedical-research-sanjay-gandhi-postgraduate-institute-of-medical-sciences-campus-lucknow</guid>
  <pubDate>Mon, 23 May 2016 01:31:29 -0500</pubDate>
  <link></link>
  <title><![CDATA[Project Assistant/Junior Research Fellow Position at  Centre of Biomedical Research, Sanjay Gandhi Postgraduate Institute of Medical Sciences Campus, Lucknow.]]></title>
  <description><![CDATA[
<p>Applications are invited from eligible candidates willing to join in a Department of Science and Technology (DST) project entitled “"Mapping neural regions involved in reading process in skilled adult Deaf reader: From neuroimaging perspective (functional Magnetic Resonance Imaging (fMRI) and Diffuse Tensor Imaging (DTI.)" as a Project Assistant/Junior Research Fellow (JRF) at Centre of Biomedical Research, Sanjay Gandhi Postgraduate Institute of Medical Sciences Campus, Lucknow.</p>

<p>Essential Qualification:</p>

<p>1. Master's degree in Bioinformatics / Computer Applications / Cognitive Science /Neuroscience/ Neuropsychology or equivalent. (Advantage will be given to NET JRF qualified candidate) Additional</p>

<p>Desirable Skills:</p>

<p>1) Programming skills (e.g., C++, Matlab, Python) 2) Experience/competent in working Window and Linux based programme.</p>

<p>Please mail your CV and covering letter to dr.uttam.kumar@gmail.com.</p>

<p>To know more about lab works please visit http://uttambrainlab.co.in/lab/.</p>

<p>Last date: 15/06/16</p>

<p>Advertisement: http://cbmr.res.in/wp-content/uploads/2016/05/Advertisement-19-5-2016.pdf</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27554/jrf-bioinformatics-at-actrec-navi-mumbai</guid>
  <pubDate>Mon, 30 May 2016 03:24:22 -0500</pubDate>
  <link></link>
  <title><![CDATA[JRF Bioinformatics at ACTREC, Navi Mumbai]]></title>
  <description><![CDATA[
<p>No. ACTREC/Advt./23/2016<br />JRF Bioinformatics recruitment in ACTREC (On contract Basis- Primeone Workforce Pvt. Ltd.)<br />Title : “Investigating the molecular basis of CaM/c-FLIP interaction to design specific c-FLIP inhibitor for modulating its anti-apoptotic function”.<br />Qualification : Master’s degree in bioinformatics, biochemistry, biotechnology and biological sciences from a recognized university with not less than 55% aggregate marks. Experience: Prior experience in modelling, protein-protein/ligand docking, Molecular dynamics simulation required. Knowledge in database development will be preferred.   </p>

<p>Pay Scale : Rs. 32,500/- <br />How to apply<br />Candidates fulfilling these requirements should pre-register by sending their application in the prescribed format with recent CV and contact details of 2 referees by e-mail to  ‘program.office@actrec.gov.in’ latest by  17.00 hrs on 23-06-2016. The interviews would be held on 27-06-2016 and only pre-registered candidates will be eligible to appear for interview. Candidates should report between 09.30 to 10.00 a.m. in Steno Pool,  3rd floor, Khanolkar Shodhika, ACTREC, Kharghar, Navi Mumbai.</p>

<p>More at http://www.actrec.gov.in/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/27695/the-kingsley-lab</guid>
  <pubDate>Fri, 03 Jun 2016 09:55:10 -0500</pubDate>
  <link></link>
  <title><![CDATA[The Kingsley Lab]]></title>
  <description><![CDATA[
<p>The Molecular Basis of Vertebrate Evolution. Naturally occurring species show spectacular differences in morphology, physiology, behavior, disease susceptibility, and life span. Although the genomes of many organisms have now been completely sequenced, Kingsley lab still know relatively little about the specific DNA sequence changes that underlie interesting species-specific traits. Kingsley lab laboratory is using a combination of genetic and genomic approaches to identify the detailed molecular mechanisms that control evolutionary change in vertebrates.</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27827/guest-faculty-centre-for-bioinformatics-at-pondicherry-university</guid>
  <pubDate>Wed, 15 Jun 2016 03:44:31 -0500</pubDate>
  <link></link>
  <title><![CDATA[Guest Faculty Centre for Bioinformatics at Pondicherry University]]></title>
  <description><![CDATA[
<p>Guest Faculty Centre For Bioinformatics Jobs opportunity in Pondicherry University<br />Qualification : M.Phil. (with NET/SLET)/ M.Tech. / M.E. in Computer Science with a minimum of 55% of marks as per UGC norms.<br />Desirable : Ph.D and Teaching experience in Perl and Java programming.<br />Honorarium : Rs. 1,000/- per lecture (subject to a maximum of Rs. 25,000/- per month)<br />How to apply<br />Walk-in-Interview will be held on 29.06.2016 (Wednesday) at 2:30 P.M at the office of Centre for Bioinformatics, Pondicherry University, Puducherry — 605 014. Interested eligible candidates may attend the Walk-in-Interview along with all original certificates, self attested photocopies and testimonials with a copy of their bio-data. Candidates reporting after 2:30 P.M will not be entertained.</p>

<p>More at http://www.pondiuni.edu.in/news?quicktabs_2=5#quicktabs-2</p>
]]></description>
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