<![CDATA[BOL: Related items]]> https://bioinformaticsonline.com/related/30147?offset=430 https://bioinformaticsonline.com/file/view/37610/applied-statistics-for-bioinformatics-using-r Thu, 30 Aug 2018 03:45:39 -0500 https://bioinformaticsonline.com/file/view/37610/applied-statistics-for-bioinformatics-using-r <![CDATA[Applied Statistics for Bioinformatics using R]]> The purpose of this book is to give an introduction into statistics in order to solve some problems of bioinformatics. Statistics provides procedures to explore and visualize data as well as to test biological hypotheses. The book intends to be introductory in explaining and programming elementary statistical concepts, thereby bridging the gap between high school levels and the specialized statistical literature

]]> Neel https://bioinformaticsonline.com/bookmarks/view/44474/claw-chloroplast-long-read-assembly-workflow Wed, 21 Feb 2024 12:37:46 -0600 https://bioinformaticsonline.com/bookmarks/view/44474/claw-chloroplast-long-read-assembly-workflow <![CDATA[CLAW: Chloroplast Long-read Assembly Workflow]]> CLAW (Chloroplast Long-read Assembly Workflow) is an mostly-automated Snakemake-based workflow for the assembly of chloroplast genomes. CLAW uses chloroplast long-reads, which are baited out of larger read libraries (e.g., an Oxford Nanopore Technologies MinION read library derived from photosynthetic tissue), for assembly with Flye and/or Unicycler. CLAW was designed with the novice bioinformatician in mind - it is easy to install and easy to use, requiring only minimal user input.

Address of the bookmark: https://github.com/aaronphillips7493/CLAW

]]> LEGE https://bioinformaticsonline.com/bookmarks/view/38487/betsy-a-new-backward-chaining-expert-system-for-automated-development-of-pipelines-in-bioinformatics Mon, 17 Dec 2018 18:46:51 -0600 https://bioinformaticsonline.com/bookmarks/view/38487/betsy-a-new-backward-chaining-expert-system-for-automated-development-of-pipelines-in-bioinformatics <![CDATA[BETSY: A new backward-chaining expert system for automated development of pipelines in Bioinformatics]]> The BETSY provides a command-line interface and available at https://github.com/jefftc/changlab. A user first searches in the knowledge base for desired output and then BETSY develops an initial workflow to produce that data which is later examined by the user. The user can optimize the parameters, the algorithm to preprocess the data, and normalize it depending on the task.

Currently, BETSY consists of modules required for the microarray and next-generation sequencing data [4] such as expression analysis, classification, peak calling, and visualization.

Address of the bookmark: https://github.com/jefftc/changlab

]]> Jit https://bioinformaticsonline.com/file/view/87/linux-cheat-sheet Tue, 09 Jul 2013 17:30:04 -0500 https://bioinformaticsonline.com/file/view/87/linux-cheat-sheet <![CDATA[Linux Cheat Sheet]]> In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.

]]> Jitendra Narayan https://bioinformaticsonline.com/opportunity/view/39603/tenure-track-position-in-bioinformatics-at-institute-of-neurobiology-unam-queretaro-mexico Mon, 10 Jun 2019 00:48:54 -0500 <![CDATA[Tenure Track position in Bioinformatics at Institute of Neurobiology, UNAM, Querétaro, México]]> The Institute of Neurobiology UNAM (www.inb.unam.mx) offers a tenure-track position at the level of Assistant Professor (Investigador Asociado C) to develop an original research program in Bioinformatics with applications to neuroscience and to establish multidisciplinary collaboration with other members of the Institute. Applicants are expected to have a doctorate degree, postdoctoral experience related to bioinformatics or genome biology, and a strong track record of peer-reviewed publications. No previous experience in neuroscience is required.

Interested applicants must submit CV and addresses of three references to ataulfo@unam.mx.

Tenure Track position in Genomic Sciences

Laboratorio Internacional de Investigación sobre el Genoma Humano, UNAM Juriquilla, Querétaro, México

The International Laboratory for Human Genome Research, LIIGH-UNAM (www.liigh.unam.mx) offers a tenure-track position at the level of Assistant Professor (Investigador Asociado C) to perform research, teaching and formation of human resources in the area of: “Genomics of Mendelian Diseases”

Applicants are expected to have a doctorate degree, postdoctoral experience related to the above mentioned area and a strong track record of peer-reviewed publications. Interested applicants must submit CV, email addresses of three references, and a three-page project to Dr. Rafael Palacios, Coordinator of LIIGH-UNAM (palacios@liigh.unam.mx) before June 21, 2019 ………………………………………………………………

Tenure Track position in Genomic Sciences

Laboratorio Internacional de Investigación sobre el Genoma Humano, UNAM Juriquilla, Querétaro, México

The International Laboratory for Human Genome Research, LIIGH-UNAM (www.liigh.unam.mx) offers a tenure-track position at the level of Assistant Professor (Investigador Asociado C) to perform research, teaching and formation of human resources in the area of: “Statistic Population Genomics and its Impact in Complex Diseases”

Applicants are expected to have a doctorate degree, postdoctoral experience related to the above mentioned area and a strong track record of peer-reviewed publications. Interested applicants must submit CV, email addresses of three references, and a three-page statement of research interests to Dr. Rafael Palacios, Coordinator of LIIGH-UNAM (palacios@liigh.unam.mx) before June 21, 2019

]]> https://bioinformaticsonline.com/news/view/396/bioinformatics-introduction-to-perl Thu, 11 Jul 2013 09:49:37 -0500 https://bioinformaticsonline.com/news/view/396/bioinformatics-introduction-to-perl <![CDATA[Bioinformatics: Introduction to PERL]]> This course is aimed at those new to programming and provides an introduction to programming using Perl. By the end of this course, attendees should be able to write simple Perl programs and to understand more complex Perl programs written by others. The course will be taught using the online Learning Perl materials created by Sofia Robb of the University of California Riverside. Further information is available.

]]> Archana Malhotra https://bioinformaticsonline.com/pages/view/40248/industrial-training-in-computer-aided-drug-designing-cadd Wed, 13 Nov 2019 05:00:44 -0600 https://bioinformaticsonline.com/pages/view/40248/industrial-training-in-computer-aided-drug-designing-cadd <![CDATA[Industrial Training in Computer Aided Drug Designing (CADD)]]> Learn More about  Computer Aided Drug Designing (CADD)!!!

#rasalsi #rasa In our Industrial program you will get Knowledge on RNA Seq, CHIP Seq,

Batch Starts From 18th November 2019

#hurryup #registernow #enquirenow The primary goal of the industrial training program is to provide students with necessary skills making with employable. RASA LSI trains students with the enhanced skills required for them to excel in jobs in biotechnology, pharmaceuticals, BioIT and related industry sectors. At Rasa you will  learn from industry leaders how to apply these skills in life science & have a command over software developing process  by using various methodologies. For Registration visit us on: https://www.rasalsi.com/index.php/front-page/industrial-training/

]]> RASA Life Sciences https://bioinformaticsonline.com/opportunity/view/842/ngs-bioinformatics-summit-europe Sat, 13 Jul 2013 17:02:34 -0500 <![CDATA[NGS & Bioinformatics Summit Europe]]> NGS & Bioinformatics Summit Europe

Conference

7th to 8th October 2013
Berlin, Germany

Website: https://www.gtcbio.com/conference/ngseurope-overview
Contact person: Kristen Starkey

We welcome you to join us at GTC’s NGS & Bioinformatics Summit Europe on October 7-8, 2013 in Berlin, Germany.

Organized by: GTC
Deadline for abstracts/proposals: 7th September 2013

]]> https://bioinformaticsonline.com/opportunity/view/41041/post-doc-computational-biology-bioinformatics-network-biology-data-science-ngs-mfd Sat, 15 Feb 2020 06:13:35 -0600 <![CDATA[Post Doc Computational Biology, Bioinformatics - Network Biology & Data Science, NGS (m/f/d)]]> https://www.jobvector.de/jobs-stellenangebote/biologie-life-sciences/forschung-entwicklung/post-doc-computational-biology-bioinformatics-network-biology-data-science-ngs-129867.html?suid=e522e9793b41817e52ac58d6963b94e2519920df

Requirements
Doctoral degree in Bioinformatics, Computational Biology, (Bio)physics/-mathematics, Biochemistry/Biology or similar with strong quantitative and numeric focus
Ability to numerically process complex and large data sets
Good programming skills (R/Bioconductor and/or Python preferred, Linux is a plus)
Experience in analyzing next-generation sequencing data sets using network biology
Scientific publication record in applied bioinformatics
Familiarity with single cell NGS analyses and other –omics techniques is a plus, but not essential

]]> https://bioinformaticsonline.com/researchlabs/view/859/boku-chair-of-bioinformatics Sun, 14 Jul 2013 12:37:23 -0500 <![CDATA[Boku Chair of Bioinformatics]]> The Bioinformatics group at Boku University has two main areas of interest, underpinning a common goal, the study of complex systems in living organisms. To overcome the engineered redundancies and combinatorial effects prevalent in higher eukaryotes, novel views augmenting the classical gene by gene approaches are required. We combine
Work to establish improved quantitative experimental assays (such as microarrays or differential in-gel electrophoresis) and
Development of modern computational methods (such as hierarchical probabilistic models or integration of heterogeneous data sources)

Link @ http://bioinf.boku.ac.at/

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