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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/30236?offset=1270</link>
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	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/35885/multi-car-a-tool-of-contig-scaffolding-using-multiple-references</guid>
	<pubDate>Tue, 06 Mar 2018 16:39:41 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/35885/multi-car-a-tool-of-contig-scaffolding-using-multiple-references</link>
	<title><![CDATA[Multi-CAR: a tool of contig scaffolding using multiple references]]></title>
	<description><![CDATA[<p><span>we design a simple heuristic method to further revise our single reference-based scaffolding tool CAR into a new one called Multi-CAR such that it can utilize multiple complete genomes of related organisms as references to more accurately order and orient the contigs of a draft genome. In practical usage, our Multi-CAR does not require prior knowledge concerning phylogenetic relationships among the draft and reference genomes and libraries of paired-end reads. To validate Multi-CAR, we have tested it on a real dataset composed of several prokaryotic genomes and also compared its accuracy performance with other multiple reference-based scaffolding tools Ragout and MeDuSa.&nbsp;</span></p><p>Address of the bookmark: <a href="http://genome.cs.nthu.edu.tw/Multi-CAR/" rel="nofollow">http://genome.cs.nthu.edu.tw/Multi-CAR/</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41565/csar-web-a-web-server-of-contig-scaffolding-using-algebraic-rearrangements</guid>
	<pubDate>Fri, 10 Apr 2020 04:39:36 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41565/csar-web-a-web-server-of-contig-scaffolding-using-algebraic-rearrangements</link>
	<title><![CDATA[CSAR-web: a web server of contig scaffolding using algebraic rearrangements]]></title>
	<description><![CDATA[<p><span>CSAR-web is a web-based tool that allows the users to efficiently and accurately scaffold (i.e. order and orient) the contigs of a target draft genome based on a complete or incomplete reference genome from a related organism.&nbsp;</span></p>
<p><span><span>CSAR-web can serve as a convenient and useful scaffolding tool allowing the users to efficiently and accurately scaffold their draft genomes according to a complete or incomplete reference genome.&nbsp;</span></span></p><p>Address of the bookmark: <a href="http://genome.cs.nthu.edu.tw/CSAR-web" rel="nofollow">http://genome.cs.nthu.edu.tw/CSAR-web</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/24942/bioinformatics-faculty-at-university-of-hyderabad</guid>
  <pubDate>Wed, 14 Oct 2015 22:53:44 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Faculty at UNIVERSITY OF HYDERABAD]]></title>
  <description><![CDATA[
<p>UNIVERSITY OF HYDERABAD</p>

<p>(A Central University established by an Act of Parliament)</p>

<p>Prof. C.R.Rao Road, P.O. Central University Campus, Gachibowli,</p>

<p>Hyderabad - 500 046</p>

<p>Advt.No. UH/HR/Rectt-2015/02 dt. 12.10.2015</p>

<p>The University invites applications from the Indian citizens for the following positions:</p>

<p>Professor / Associate Professor / Assistant Professor :</p>

<p>    Biotechnology &amp; Bioinformatics</p>

<p>Last date : 16th November 2015</p>

<p>More Info : http://www.uohyd.ac.in/images/recruitment/advt-121015.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/36817/kwip-the-k-mer-weighted-inner-product-a-de-novo-estimator-of-genetic-similarity</guid>
	<pubDate>Tue, 29 May 2018 08:37:53 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/36817/kwip-the-k-mer-weighted-inner-product-a-de-novo-estimator-of-genetic-similarity</link>
	<title><![CDATA[kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity]]></title>
	<description><![CDATA[<p>The k-mer Weighted Inner Product.</p>
<p>This software implements a <em>de novo</em>, <em>alignment free</em> measure of sample genetic dissimilarity which operates upon raw sequencing reads. It is able to calculate the genetic dissimilarity between samples without any reference genome, and without assembling one.</p>
<p> </p>

De novo estimates of genetic relatedness from next-gen sequencing data https://kwip.readthedocs.org<p>Address of the bookmark: <a href="https://github.com/kdmurray91/kwip" rel="nofollow">https://github.com/kdmurray91/kwip</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25250/srfjrf-biotechnology-nrcpb-delhi-delhi</guid>
  <pubDate>Fri, 13 Nov 2015 02:52:11 -0600</pubDate>
  <link></link>
  <title><![CDATA[SRF/JRF Biotechnology NRCPB - Delhi, Delhi]]></title>
  <description><![CDATA[
<p>SRF/JRF job position in National Research Centre on Plant Biotechnology (NRCPB)</p>

<p>JRF /1</p>

<p>Qualification : Master’s Degree in Biotechnology / life sciences with four years Bachelor’s Degree (or) Master’s Degree in Biotechnology / life sciences with NET qualification with 1st Division or 60% marks or equivalent overall grade point average . Non NET/ Master’s degree with three years Bachelor’s degree as per DST/DBT norms. Desirable: Working Experience in Molecular Biology Techniques, genome sequence analysis Bioinformatics</p>

<p>Emoluments : Rs.25000</p>

<p>SRF</p>

<p>Qualification : Master’s degree in Biotechnology/Bioinformatics/Life Science with 1st division or 60% marks or equivalent overall grade point average with 4 year of Bachelor’s degree or 5 years integrated Masters degree. Desirable: Working experience in Bioinformatics, genomic analysis</p>

<p>Emoluments : Rs.25000/</p>

<p>Age Limit: 35 years</p>

<p>Walk-in-interview will be held on 20th November 2015 at 10 AM at NRCPB, LBS Building, Pusa Campus, and New Delhi-110012</p>

<p>More at http://www.nrcpb.org/sites/default/files/Adverdisement_0.pdf</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25097/teaching-careers-2015-at-uttaranchal-college-of-science-technology</guid>
  <pubDate>Mon, 02 Nov 2015 04:00:26 -0600</pubDate>
  <link></link>
  <title><![CDATA[Teaching Careers 2015 at Uttaranchal College of Science &amp; Technology]]></title>
  <description><![CDATA[
<p>Teaching, Non-teaching Careers 2015<br />Uttaranchal College of Science &amp; Technology - Dehra Dun, Uttarakhand<br />Teaching, Non-teaching Careers 2015 at Uttaranchal College of Science and Technology, Dehradun</p>

<p>Below mentioned teaching and non-teaching job vacancies are to be recruited.</p>

<p>Assistant Professors job vacancies in the disciplines of:<br />Biotechnology<br />Bioinformatics</p>

<p>Eligibility:<br />Masters Degree in the Discipline along with Ph.D</p>

<p>How to apply:<br />Candidates who possess requisite eligibility criteria for all the above mentioned positions required to apply on or before 10 days from the date of vacancy notification.</p>

<p>Candidates required to send copies of all the documents along with application</p>

<p>Contact details:<br />Uttaranchal College of Science &amp; Technology<br />Nagal Hatnala, P.O. Kulhan Sahastradhara Road,<br />Dehradun-248001, Uttarakhand, India</p>

<p>More details can be had at:<br />Dehradun Classifieds e-paper dated 01.11.2015 at page number 40-41</p>

<p>About Employer</p>

<p>Uttaranchal College of Science and Technology, Dehradun, Uttarakhand is affiliated to HNB Garhwal University, Srinagar, Uttarakhand</p>

<p>Employer:	Uttaranchal College of Science &amp; Technology<br />Address:	Uttaranchal College of Science &amp; Technology Nagal Hatnala, P.O. Kulhan Sahastradhara Road, Dehradun-248001, Uttarakhand, India<br />Email:	info@ucstdoon.com<br />URL:	http://www.ucstdoon.com<br />Phone:	0135-2607011, 607413, 3254785, 09719146701</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25150/project-assistant-ii-jobs-opportunity-in-national-chemical-laboratory-ncl-on-temporary-basis</guid>
  <pubDate>Fri, 06 Nov 2015 01:36:16 -0600</pubDate>
  <link></link>
  <title><![CDATA[Project Assistant II Jobs opportunity in National Chemical Laboratory (NCL) on temporary basis]]></title>
  <description><![CDATA[
<p>No. Bio/NCIM/3 </p>

<p>Project Assistant II Jobs opportunity in National Chemical Laboratory (NCL) on temporary basis</p>

<p>Project Code No. : GAP312626</p>

<p>Title of the Project : Microbial ecology and distribution of geochemical cycling genes in an hot spring ecosystem</p>

<p>No. of Post : 01</p>

<p>Qualifications : M.Sc./B.Tech/M.Tech in Computational biology/ Bioinformatics from recognized university with minimum 60 % marks (aggregate) </p>

<p>Desirable : Good knowledge of computational skills, Linux (command line and GUI) and Unix; Perl / Python / R /C-programming. Practical knowledge of analysis of Next generation sequence datasets (amplicon sequencing, whole metagenome, and complete genome sequencing) with reference to microbes. Analysis and statistical validation of NGS data generated from different chemistry platforms. Some wet-lab experience in microbial system would be an added advantage as project involves some travel.</p>

<p>Emoluments : Rs. 16,000/- </p>

<p>Age Limit : 28 years<br />How to apply</p>

<p>The application with the above information duly signed together with photo-copies of relevant certificates/testimonials should be addressed to : The Head, NCIM Resource Centre (Attn Dr. M.S. DHARNE), National Chemical Laboratory, Pune 411 008, so as to reach on or before 16th November 2015.</p>

<p>More at http://www.ncl-india.org/files/JoinUs/JobVacancies/TemporaryJobs.aspx?menuid=ql6&amp;childmenustripid=divSubQL6</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25287/postdoc-position-in-bioinformatics-irccs-milan-italy</guid>
  <pubDate>Wed, 25 Nov 2015 03:38:38 -0600</pubDate>
  <link></link>
  <title><![CDATA[PostDoc position in Bioinformatics - IRCCS - Milan - Italy]]></title>
  <description><![CDATA[
<p>PostDoc position in Bioinformatics</p>

<p>A full-time post-doctoral position for a bioinformatician with experience in managing and analyzing NGS data is available in the Laboratory of Molecular Cardiology at Policlinico San Donato-IRCCS, Milan, Italy. For lab publications, see: http://scholar.google.it/citations?user=wAPKO9wAAAAJ&amp;hl=it&amp;oi=ao</p>

<p>https://www.researchgate.net/profile/Fabio_Martelli</p>

<p>The goal of the project is investigating the regulation and functional role of non coding RNAs in tissue response to hypoxia and ischemia.</p>

<p>We are looking for a candidate that is going to interact with biologists and bioinformaticians to manage and analyze NGS data (mostly RNA-seq) and microarray data.</p>

<p>The successful candidate must have a minimum of 3 years experience in dealing with NGS data, a good command of English and written communication and at least 2 relevant publications as first author in peer reviewed international journals. The candidate is expected to interact with a small international group and to be able also to work independently. Knowledge of programming is a definitive plus, as well as a good statistical background and/or wet molecular biology skills.</p>

<p>Salary is proportional to experience and to the publication record (up to 38 000euro/year before taxes and retirement contribution i.e. IRPEF and INPS).</p>

<p>Please, send your CV by e-mail to Fabio Martelli:</p>

<p>fabio.martelli@grupposandonato.it</p>

<p>Location: Laboratory of Molecular Cardiology at Policlinico San Donato-IRCCS, Milan, Italy.<br />Link: https://www.researchgate.net/profile/Fabio_Martelli<br />Contact person: Fabio Martelli<br />Contact email: fabio.martelli@grupposandonato.it</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25301/jrf-bioinformatics-at-cuk</guid>
  <pubDate>Sat, 28 Nov 2015 03:26:21 -0600</pubDate>
  <link></link>
  <title><![CDATA[JRF Bioinformatics at CUK]]></title>
  <description><![CDATA[
<p>JRF job opportunity in Central University of Kerala (CUK) on temporary basis </p>

<p>Project Title : "Targeting TAL effector mediated susceptibility for durable and broad-spectrum resistance to bacterial blight in Rice"</p>

<p>No. of Post : 01</p>

<p>Qualification : MSc in any subject under Life Science or Bioinformatics/ B.Tech in Bioinformatics + 1 yr experience </p>

<p>Stipend : Rs. 14,000/-</p>

<p>How to apply</p>

<p>Interested candidates are requested to send their applications explaining their interest in the position with an updated CV to Dr. Ginny Antony, Assistant Professor, Department of Plant Science, School of Biological Sciences, Central University of Kerala, Padannakkad, Kasaragod, Kerala - 671 314 email: ginnycuk2013@gmail.com on or before 20th December, 2015.</p>

<p>More at http://cukerala.ac.in/index.php?option=com_content&amp;view=article&amp;id=1022:applications-invited-for-the-post-of-jrf-department-of-plant-science&amp;catid=106&amp;Itemid=593&amp;lang=en</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25503/assistant-professor-computational-biology-and-bioinformatics-in-navi-mumbai</guid>
  <pubDate>Fri, 04 Dec 2015 20:40:59 -0600</pubDate>
  <link></link>
  <title><![CDATA[Assistant Professor - Computational Biology and Bioinformatics in Navi Mumbai]]></title>
  <description><![CDATA[
<p>No. ACTREC / ADVT-A/2/2015 <br />Pay in Pay band and Grade Pay : PB-3 (Rs 15,600-39,100) Pay in pay band Rs 21,900+ G.P. of Rs 7,600 <br />Total emoluments = 82,000/- p.m. &amp; nbsp <br />Educational Qualification : Ph.D. or MD/Ph.D. <br />Experience : Post MD / Ph.D. Research experience of 5 years The last date of application submission is January 15th, 2016. <br />Interested candidates shall send the applications through email: office.sao(at)actrec.gov.in. <br />For More Details : www.actrec.gov.in/data%20files/Vacancies/2015/Faculty-Positions-SOE-24-11-15.pdf</p>
]]></description>
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