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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/31087?offset=1330</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27211/srbioinformatics-analyst-ngs-ocimumbio</guid>
  <pubDate>Mon, 02 May 2016 04:41:22 -0500</pubDate>
  <link></link>
  <title><![CDATA[Sr.Bioinformatics Analyst (NGS) @ OcimumBio]]></title>
  <description><![CDATA[
<p>Sr.Bioinformatics Analyst (NGS)</p>

<p>Experience Required: 3-5 years of experience<br />No of Positions : Multiple<br />Qualifications: Candidates with minimum qualification as M.Sc Bioinformatics with 3-5  years of experience in Life sciences R&amp;D or Pharma Industry.<br />Ph.D candidates with research experience in Bioinformatics with publications in International journal and minimum 2 years of  industry experience in clinical genomics will be preferred for this position.</p>

<p>Requirement:</p>

<p>1.  Must have basic understanding of molecular biology and Genomics.<br />2. Experience in application development or must have expertise in programming using either of Perl/Python.<br />3.  Experience in statistical programming using R/Bioconductor/Matlab.<br />4. Strong concept in statistical and mathematical modelling.<br />5.  Experience in designing and developing the bioinformatics pipeline.<br />6.  Must have minimum 2+ years of hands on experience in NSG data analysis such as RNA-Seq,Exome-Seq ,Chip-Seq and downstream analysis.<br />7. Knowledge in WGS ,WES, Targeted re-sequencing,GWAS and population genomics will be preferred.<br />8. Must have experience working on opensource software/Framework and commercial software for NGS data analysis and reporting.<br />9. Should be aware of handling big data and guiding team members on multiple projects simultaneously.<br />More at http://www.ocimumbio.com/careers1/<br />10. Should have experience coordinating with different groups of clinical research scientist for various project requirements.<br />11. Ability to work as team as well as independently with minimal support.</p>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27274/bioinformatics-national-certification-binc-examination-2016</guid>
  <pubDate>Wed, 11 May 2016 02:17:44 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics National Certification (BINC) Examination 2016]]></title>
  <description><![CDATA[
<p>Bioinformatics National Certification (BINC) Examination 2016</p>

<p>Department of Biotechnology, Government of India, New Delhi &amp; Pondicherry University, Puducherry</p>

<p>Starting of online submission of application : April 13, 2016</p>

<p>Last date for submission of application : May 13, 2016</p>

<p>Examination consists of two parts:</p>

<p>Part - I (Paper - I) : June 12, 2016 (10 AM -12 PM)<br />Part - II (Paper • II &amp; III) : June 26, 2016 (9 AM • 12 PM &amp; 2 PM • 4 PM)</p>

<p>Objective: Pondicherry University, on behalf of the Department of Biotechnology (DBT),<br />Government of India, will conduct the Bioinformatics National Certification (BING) examination. The objective of this examination is to identify Bioinformatics professionals<br />for further studies as well as to help potential employers in recruitment of candidates having exceptionally good Bioinformatics skills.</p>

<p>Eligibility : Bachelor degree in Life Sciences, Physical Sciences, Chemical Sciences, Mathematical Sciences, Agriculture, Veterinary, Medicine, Pharmacy, Engineering and Technology are eligible to appear for the examination. They need not have any formal training, diploma or certificate in Bioinformatics.</p>

<p>Application and syllabus : The online application can be filled from April 13, 2016 to May 13, 2016.</p>

<p>Syllabus for the examination is available online.</p>

<p>It consists of five sections:<br />Bioinformatics, Biology, Physical and Chemical Sciences, Mathematics &amp; Statistics and Computer Science &amp; Information Technology.</p>

<p>Examination : The examination fee is Rs. 600/- for general candidates, Rs. 400/- for women/OBC candidates and Rs. 200 for SC/ST candidates, and no fee for physically challenged candidates.</p>

<p>The online Part - I (Paper - I) examination is scheduled on June 12,2016 and Part- II (Paper - II and Paper- III) on June 26, 2016. The Paper- I will be of objective type and candidates scoring a minimum of 40% marks in Paper - I will be called to appear in Part II examination.</p>

<p>Part II examination consists of two papers : The Paper - II will be of short answer type questions of three hours duration while the Paper- III will be a practical examination of two hours duration to test analytical ability and programming skill of candidates.</p>

<p>Research Fellowships for all the successful candidates those who are interested and qualified in pursuing Ph.D. in India will be awarded. In addition, cash prizes will be  awarded to the top 10 successful candidates.</p>

<p>The details of examination centres, other details and submission of application, please<br />visit: http://www.pondiuni.edu.in/exams/binc/</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27238/slurm</guid>
	<pubDate>Wed, 04 May 2016 05:13:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27238/slurm</link>
	<title><![CDATA[SLURM]]></title>
	<description><![CDATA[<p><a href="http://www.schedmd.com/">SLURM</a> workload manager software, a free open-source workload manager designed specifically to satisfy the demanding needs of high performance computing.</p>
<p>This page is a <em>HOWTO</em> guide for setting up a <a href="http://www.schedmd.com/">SLURM</a> installation, currently focused on a CentOS 7 Linux OS. Please send feedback to Ole.H.Nielsen /at/ fysik.dtu.dk.</p>
<p>See the <a href="http://www.schedmd.com/">SLURM</a> homepage (also <a href="https://computing.llnl.gov/linux/slurm/">https://computing.llnl.gov/linux/slurm/</a>).</p><p>Address of the bookmark: <a href="https://wiki.fysik.dtu.dk/niflheim/SLURM" rel="nofollow">https://wiki.fysik.dtu.dk/niflheim/SLURM</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27290/scientists-post-at-monsanto</guid>
  <pubDate>Wed, 11 May 2016 07:58:44 -0500</pubDate>
  <link></link>
  <title><![CDATA[Scientists post at Monsanto]]></title>
  <description><![CDATA[
<p>Sustainable agriculture is at the core of Monsanto. We develop technologies that enable farmers to produce more crops while conserving natural resources. Monsanto scientists are conducting research and development (R&amp;D) to revolutionize plant breeding and biotechnology.</p>

<p>Monsanto is seeking a very talented Genomics Scientistto become an integral member of our Global Pipeline Analytics team with a focus on quantitative genetics. The ideal candidate will have familiarity with modeling and analysis of genetic data sets using a variety of statistical techniques.</p>

<p>Major Responsibilities:<br />- Provide guidance on experimental design for genomic-related experiments<br />- Familiarity with analysis of the following methods: GWS, QTL, eQTL, RNA-Seq<br />- Provide written and oral presentations of methods, results, conclusions, and recommendations to peer and management groups.<br />- Ensure timely delivery and clear communication of results<br />- Develop strong and successful collaborations among various Monsanto enabling teams.</p>

<p>Required Skills:</p>

<p>- PhD degree in Statistics, Biostatistics, Statistical Genetics, Quantitative Genetics, Breeding, Bioinformatics or a related field with 2 years of experience<br />- Working knowledge and experience with one of the following quantitative languages:R, Python, Perl, SAS<br />- Background in Windows and Linux operating systems<br />- Very strong problem solving skills will be required to work well as a member of a dynamic team<br />- Strong verbal and written communication skills.<br />- Demonstrated ability to deliver timely results and be results oriented.<br />- Extensive knowledge of quantitative genetics and experimental design.&nbsp;<br />- Demonstrated track record of solving challenging and complex problems.</p>

<p>Desired Skills/Experience:</p>

<p>- Excellent communication skills, with the ability to summarize complex concepts in language understandable by scientists from a variety of disciplines.<br />- Experience in agronomy and/or plant breeding in vegetables or row crops.</p>

<p>Please apply to<br />https://jobs.monsanto.com/job/st-louis/genomics-scientist/769/2081771</p>
]]></description>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/27318/sample-binc-question-paper-2016-part2</guid>
	<pubDate>Fri, 13 May 2016 03:42:56 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/27318/sample-binc-question-paper-2016-part2</link>
	<title><![CDATA[Sample BINC question paper 2016 - part2]]></title>
	<description><![CDATA[<p>Download the sample question paper for BINC 2016 - paer II</p>]]></description>
	<dc:creator>Radha Agarkar</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/27318" length="52024" type="application/pdf" />
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/27344/orffinder-with-smart-blast</guid>
	<pubDate>Tue, 17 May 2016 01:43:15 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/27344/orffinder-with-smart-blast</link>
	<title><![CDATA[ORFfinder with smart BLAST]]></title>
	<description><![CDATA[<p><span>ORF Finder</span></p><p><span><a href="http://www.ncbi.nlm.nih.gov/orffinder">ORFfinder</a><span>&nbsp;is a graphical analysis tool for finding open reading frames (ORFs). We&rsquo;ve been working on a few updates, and we&rsquo;d like to find out what you think about them. Read on to find out what you can do with the new ORFfinder.</span></span></p><p>Smart BLAST (https://ncbiinsights.ncbi.nlm.nih.gov/2015/07/29/smartblast/)</p><p>Select one or a group of ORFs and BLAST several databases at once, and use the newly developed&nbsp;<a href="http://blast.ncbi.nlm.nih.gov/smartblast/">SmartBLAST</a>&nbsp;to verify protein names.&nbsp;Looking for the traditional results from&nbsp;<a href="http://blast.ncbi.nlm.nih.gov/Blast.cgi">BLAST</a>? They&rsquo;re there too.</p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27430/mosaik-a-hash-based-algorithm-for-accurate-next-generation-sequencing-short-read-mapping</guid>
	<pubDate>Fri, 20 May 2016 18:53:49 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27430/mosaik-a-hash-based-algorithm-for-accurate-next-generation-sequencing-short-read-mapping</link>
	<title><![CDATA[MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping]]></title>
	<description><![CDATA[<p><span>MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a reference genome. Uniquely among current mapping tools, MOSAIK can align reads generated by all the major sequencing technologies, including Illumina, Applied Biosystems SOLiD, Roche 454, Ion Torrent and Pacific BioSciences SMRT. Indeed, MOSAIK was the only aligner to provide consistent mappings for all the generated data (sequencing technologies, low-coverage and exome) in the 1000 Genomes Project. To provide highly accurate alignments, MOSAIK employs a hash clustering strategy coupled with the Smith-Waterman algorithm. This method is well-suited to capture mismatches as well as short insertions and deletions. To support the growing interest in larger structural variant (SV) discovery, MOSAIK provides explicit support for handling known-sequence SVs, e.g. mobile element insertions (MEIs) as well as generating outputs tailored to aid in SV discovery.</span></p><p>Address of the bookmark: <a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0090581" rel="nofollow">http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0090581</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27453/senior-project-fellow-bioinformatics-at-nbri</guid>
  <pubDate>Sat, 21 May 2016 21:01:05 -0500</pubDate>
  <link></link>
  <title><![CDATA[Senior Project Fellow Bioinformatics at NBRI]]></title>
  <description><![CDATA[
<p>Walk In Interview No. 03/Project/2016<br />Senior Project Fellow Bioinformatics Job vacancies in CSIR- National Botanical Research Institute (NBRI), Lucknow<br />Area III: Molecular Biology &amp; Biotechnology<br />Qualification : 1st Class M.Sc. in Bioinformatics/Biotechnology/ Life Science /Biochemistry/Botany with 2 years research experience and at least one publication in SCI Journal or 1st class M.Tech in Bioinformatics<br />Age : 32 years<br />Salary : Rs.18000<br />How to apply<br />Date &amp; Venue of Interview For Area III: 27-05-2016 at 11.00 A.M. at Conference Room, T.N. Khushoo Block, NBRI, Lucknow.</p>

<p>http://www.nbri.res.in/temp.php</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27477/cytoscape</guid>
	<pubDate>Mon, 23 May 2016 02:32:00 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27477/cytoscape</link>
	<title><![CDATA[Cytoscape]]></title>
	<description><![CDATA[<p>Cytoscape is an <a href="http://www.cytoscape.org/download.php">open source</a> software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of <a href="http://apps.cytoscape.org/"><em>Apps</em></a> are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.</p><p>Address of the bookmark: <a href="http://www.cytoscape.org/" rel="nofollow">http://www.cytoscape.org/</a></p>]]></description>
	<dc:creator>Anjana</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27549/ra-at-university-of-hyderabad</guid>
  <pubDate>Sun, 29 May 2016 11:50:37 -0500</pubDate>
  <link></link>
  <title><![CDATA[RA at UNIVERSITY OF HYDERABAD]]></title>
  <description><![CDATA[
<p>UNIVERSITY OF HYDERABAD</p>

<p>School of Life Sciences</p>

<p>Department of Animal Biology</p>

<p>Applications are invited on a plane paper (along with copies of educational qualifications and experience) from eligible candidates for the selection of following position to work under a collaborative research project entitled “Development and application of high resolution genome conformation capture technology to investigate genome architecture in space and time” between University of Hyderabad and CR Rao advanced Institute of Mathematics, Statistics and Computer Sciences, sponsored by Department of Biotechnology, Government of India, New Delhi</p>

<p>Name and No. of positions JRF‐ONE</p>

<p>Emoluments for the position Rs. 25,000/p.m. + Eligible HRA</p>

<p>Qualifications MSc or M.Tech in any branch of biology/bioinformatics/computational biology/computer sciences/Mathematics/Physics</p>

<p>Duration Appointments are made initially for ONE year and can be extended further TWO years or until the duration of project</p>

<p>Our laboratory is interested in understanding signalling and spatiotemporal dynamics of 3‐Dimensional genome architecture and gene expression during embryonic stem cell differentiation by utilizing a combination of cellular, molecular genetics, Biochemical and computational tools in combination with next generation sequencing based chromatin structure analysing methods. Successful candidates shall pursue project related to either experimental or computational analysis of genome and Epigenomics data derived from human and mouse cells. Experience in Computational biology, bioinformatics, statistics, machine learning and algorithmic development is required. Knowledge of programming languages (e.g. C, C++, Perl, Python, Ruby etc.) and statistical framework (e.g. R, matlab, etc.) is preferable. Basic understanding of molecular biology will be an added advantage.</p>

<p>Interested candidates with the above mentioned qualification can send their curriculum vitae to   Dr. K. Sreenivasulu, Department of Animal Biology, School of Life Sciences, South campus, University of Hyderabad or via email at positionssklab@gmail.com or svksl@uohyd.ernet.in.</p>

<p>Candidates with CSIR/UGC/ICMR/DBT/BINC qualifications if interested in above mentioned area of research are welcomed to approch principal investigator for a position leading to PhD. Last date for submission of applications is 17/06/2016. Eligible candidates will be called for an interview and they should carry all original certificates of the qualifying exam. No TA/ DA will be paid for attending the interview or at the time of joining the post.</p>

<p>Advertisement: http://www.uohyd.ac.in/images/recruitment/jrf_260516.pdf</p>
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