BOL: Related items

BakRep (Denglish blend of Bakterien & Repository) simplifies access to this data

Neel — Wed, 13 Aug 2025 02:31:28 -0500

2,438,386 bacterial genomes at your fingertips consistently processed & characterized, enriched with metadata, accessible via a flexible search engine.

BakRep (Denglish blend of Bakterien & Repository) simplifies access to this data. It integrates enriched genomic information with metadata accessible via a flexible search-engine.

Key features

Assembly statistics: ensure data quality with genome-based key metrics
Taxonomic classification: robust, purely genome-based classifications (GTDB)
MLST: subtyping for deeper insights into genetic variation
Annotation: comprehensive & taxonomy-independent (Bakta)
Metadata: full original submission records

Address of the bookmark: https://bakrep.computational.bio/

Cáceres Lab

Sat, 02 Oct 2021 00:20:42 -0500

Lab are included within the Genomics, Bioinformatics and Evolution group of the UAB, and collaborate closely with other researchers in the Barcelona area, such as Xavier Estivill of the Centre for Genomic Regulation (CRG), Juan R González of the Centre for Research in Environmental Epidemiology (CREAL), and Tomàs Marqués-Bonet of the Institute of Evolutionary Biology (IBE), as well as with other international groups and projects.

https://grupsderecerca.uab.cat/cacereslab/

Python vs Perl

Rahul Agarwal — Thu, 11 Jul 2013 14:39:19 -0500

Why bioinformatician still using Perl when Python is easy to code, good in ReXp and faster than perl?

lsugenomics Lab

Thu, 07 Jul 2022 05:26:37 -0500

In our lab, we seek to characterize and to compare genomes in order to better understand genetic and evolutionary processes linking genotypes to phenotypes.

Sequencing and decoding plant genomes have been integral in our approaches.

The overarching goal of our research is to understand how to interpret complex and fascinating messages embedded in genomes.

https://www.lsugenomics.org/

Junior Research Fellow (JRF)

Sat, 13 Jul 2013 11:17:22 -0500

School of Biotechnology
Gautam Buddha University
Greater Noida, UP - 201310

Applications are invited for one position of Junior Research Fellow (JRF) in a Department of Biotechnology (DBT) sponsored research project entitled “Design, synthesis and evaluation of potent aminopeptidase inhibitors for malarial therapy” under the supervision of Dr. Shakti Sahi.

The monthly fellowship of JRF will be Rs 12,000/- plus HRA as per the University rules.

Essential Qualification: Master degree in any discipline of Life Science with NET qualified.

Desirable Qualification: Preference will be given to candidates having research experience in in silico drug designing/Bioinformatics.

Interested candidates may send their resume to undersigned on or before 14th July 2013 by post-mail/e-mail shaktis@gbu.ac.in or shaktisahi@gmail.com. No TA and DA will be paid for appearing for the interview. Dr. Shakti Sahi (Principle Investigator)

Advertisement:
www.gbu.ac.in/Recruitment/JRF_Advt_DBTProject_Shakt

Bioinformatics Training Collections !

BioStar — Sun, 05 Mar 2023 23:01:26 -0600

Useful list of bioinformatics training collections @ https://github.com/sib-swiss/training-collection

Address of the bookmark: https://github.com/sib-swiss/training-collection

Nedelec Lab

Sat, 13 Jul 2013 17:38:55 -0500

Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.

Our long-term research objective is to understand microtubule organization in living cells, with an emphasis on mitosis. We develop in-vitro assays, quantitative image analysis and cytosim, a computer simulation to study cellular architecture from a mechanistic angle, modeling the interactions of microtubules and related proteins such as molecular motors. In the past, we combined simulations and experiments to study microtubule self-organization, and the mechanical stability of two interacting asters. More recently, we looked at the focusing of mitotic fibers, the formation of antiparallel arrays of microtubules in fission yeast and the spindle positionning in C. elegans.
We are supported by BioMS, an initiative in Systems Biology, and involved in Cell networks.

Link: http://www.cytosim.org

Bioinformatics Opening at NIBMG, India

Sun, 03 Dec 2023 00:16:59 -0600

NIBMG is looking for motivated and bright individuals interested to explore career
opportunities for the position of Research Associate (Project Linked Person) for extramural
project funded by ICMR as per details given below.
Project Name: Fast detection of driver mutations and genes from cancer genomics data using
an integrative machine learning-based approach.

More at https://www.nibmg.ac.in/uploads/3c5d4da3fb31bef490a218805408c858.pdf

Bahlo Lab

Sun, 14 Jul 2013 12:17:38 -0500

Melanie Bahlo is an applied statistician working in the areas of statistical genetics, bioinformatics and population genetics. Her main area of research is linkage mapping, in humans and mice.

Research Area:
Mapping loci in ENU mutants in mice in complex pedigrees
Investigation of DNA sharing in distantly related individuals
CNV analysis in pedigrees and connections to linkage studies
Statistical Genetics

Link @ http://www.wehi.edu.au/faculty_members/dr_melanie_bahlo

Postdoc at UBasel Comparative Single Cell Genomics

Fri, 13 Dec 2024 12:46:19 -0600

A fully funded 4-year Postdoc position is available in the lab of Patrick
Tschopp at the University of Basel, Switzerland, study the molecular and
tissue-scale dynamics during the embryonic formation of the vertebrate
skeleton and compare it across different vertebrate species with distinct
habitats.

We are looking for a highly motivated candidate with a PhD degree in
Bioinformatics or a related field. Candidates are expected to have a
strong background in evolutionary biology and/or comparative functional
genomics. Additional experiences in single cell functional genomics
analyses, statistics and computational data analyses are a plus, as is
an interest in comparative developmental (EvoDevo) questions.

We offer a dynamic and interactive research environment with state-of-the
art research facilities, good research funding and internationally
competitive salaries.

The Tschopp lab (www.evolution.unibas.ch/tschopp/research/)
studies the gene regulatory mechanisms of cell type
specification and evolution in vertebrates. See also our
preprints at https://doi.org/10.1101/2024.03.26.586769 and
https://doi.org/10.1101/2024.11.28.625862 Applications should include
a motivation letter, a CV, a list of publications, a statement about
research interests, as well as the names and contact details of at
least two referees. Applications (in the form of a single .pdf file)
should be sent to Patrick Tschopp (patrick.tschopp@unibas.ch); review
of applications will begin on January 1st 2025, and will continue until
the position is filled.