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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/31353?offset=1370</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26432/summer-2016</guid>
  <pubDate>Sun, 21 Feb 2016 06:17:55 -0600</pubDate>
  <link></link>
  <title><![CDATA[Summer 2016]]></title>
  <description><![CDATA[
<p>REU at Fordham University- Summer 2016</p>

<p>An NSF-funded REU to study Y-chromosome diversity and sex-biased dispersal in wild brown rats (Rattus norvegicus) is available in the Munshi-South Lab at Fordham University. Our lab is currently investigating rat evolution at scales ranging from landscape genetics of individual cities to global patterns of diversity. Development of resources for investigating Y-chromosome diversity will support many of these studies. The REU student will work with the lab to bioinformatically identify Y-chromosome SNPs, design SNPtype assays,<br />extract DNA, genotype samples, and analyze data.</p>

<p>We seek applicants interested in bioinformatics, evolutionary biology, and related disciplines.  Applicants must have taken a college-level genetics course.  This REU will require attention to detail, reliability, independence, and critical thinking.</p>

<p>This position is based at Fordham University's field station, the Louis Calder Center, in Armonk, NY. The Calder Center is located approximately 25 miles north of New York City in a protected woodland area. Housing<br />will be provided at the Calder Center for the duration of the REU (May 23 to Aug 12, 2016). Additionally, the student will receive a $6,000 stipend. The selected student will participate in professional development activities through the Calder Centers REU program, including presentation of results at a research colloquium at the end of the summer.</p>

<p>To apply, please send a one page personal statement about your scientific interests and how this REU will support your professional goals, unofficial transcripts including a list of Spring 2016 courses, and names of two professional references (including title, address, phone number, and email address) as a single pdf (with your last name in the file name) to Dr. Jason Munshi-South (jmunshisouth@fordham.edu).</p>

<p>Applications are due March 4th, 2016.</p>

<p>Jason Munshi-South</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/26456/the-mills-lab</guid>
  <pubDate>Wed, 24 Feb 2016 16:18:38 -0600</pubDate>
  <link></link>
  <title><![CDATA[The Mills lab]]></title>
  <description><![CDATA[
<p>The laboratory is focused on the discovery and analysis of structural variation (SVs) from genomic sequence data. As part of the 1000 Genomes Project and other endeavors, we have helped produce initial fine-scale maps using a variety of SV discovery approaches including: (i) paired-end mapping (or read pair analysis) based on abnormally mapped pairs of clone ends; (ii) read-depth analysis, which detects deletions and duplications through analysis of the read depth-of-coverage; (iii) split read analysis, which detects SVs by evaluating gapped sequence alignments; and (iv) sequence assembly, which enables the discovery of novel (non-reference) sequence insertions.</p>

<p>http://millslab.org/research.html</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26543/breakseq2</guid>
	<pubDate>Mon, 29 Feb 2016 17:45:38 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26543/breakseq2</link>
	<title><![CDATA[BreakSeq2]]></title>
	<description><![CDATA[<p>Ultrafast and accurate nucleotide-resolution analysis of structural variants</p>
<p>More at http://bioinform.github.io/breakseq2/</p>
<p>Download BreakSeq2</p>
<p>Latest version: https://github.com/bioinform/breakseq2/archive/2.2.tar.gz<br><br>For other versions, see "releases". https://github.com/bioinform/breakseq2/releases</p><p>Address of the bookmark: <a href="http://bioinform.github.io/breakseq2/" rel="nofollow">http://bioinform.github.io/breakseq2/</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26712/post-doctoral-fellow-jobs-opportunity-in-srm-university</guid>
  <pubDate>Thu, 17 Mar 2016 11:20:14 -0500</pubDate>
  <link></link>
  <title><![CDATA[Post-Doctoral Fellow Jobs opportunity in SRM University]]></title>
  <description><![CDATA[
<p>Post-Doctoral Fellow Jobs opportunity in SRM University</p>

<p>Essential qualification : Ph.D. in Bioinformatics/Biotechnology/Genetics/Computational Biology.Understanding of genomics data and advanced knowledge of Java, and C/C++ as the programming languages and the scripting language like perl and/or Python, SQL is preferred. Experience in High Performance Computing, data architecture, database development is desirable</p>

<p>Fellowship: Rs 35,000 /-<br /> <br />How to apply</p>

<p>Candidates are requested to send their CV, and a brief summary of research experience by e-mail careers.genetics@ktr.srmuniv.ac.in  on or before 30/03/2016.</p>

<p>More at http://www.srmuniv.ac.in/jobs-applications-for-position-of-post-doctoral-fellow</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26850/wellcome-trustdbt-india-alliance-margdarshi-fellowships-2016</guid>
  <pubDate>Tue, 29 Mar 2016 17:47:39 -0500</pubDate>
  <link></link>
  <title><![CDATA[Wellcome Trust/DBT India Alliance Margdarshi Fellowships 2016]]></title>
  <description><![CDATA[
<p>The Wellcome Trust/DBT India Alliance invites application for the Margdarshi Fellowship scheme. The scheme provides a unique opportunity for visionary biomedical scientists to lead and nucleate a cutting edge research program in India in collaboration with Indian Host Institution(s). The potential candidates and the Host Institution are encouraged to make a synergistic effort towards establishing a centre of excellence that aims to improve the existing scientific breadth and utilizes the experience of the lead applicant for developing new research platforms. In addition to this, under this programme two eligible Indian institutions may also come together towards creating a new program under the leadership of a visionary scientist.</p>

<p>Eligibility</p>

<p>Interested applicants must</p>

<p>Have around 10 years of experience as independent investigator, and can be of any age or nationality<br />Have Sponsor(s) at not-for-profit Host Institution(s) in India, who is willing to extend the desired commitment and resources for program implementation<br />Provisions</p>

<p>The 5 year Fellowship provides</p>

<p>Generous personal support for the Fellow<br />Salary support for personnel, which may include Assistant Professors<br />Large quantum of funds for equipment, animals and consumables<br />Funds to attend scientific gatherings, for collaborative visits and to organize meetings<br />Overheads for the Host Institution<br />Process</p>

<p>A joint online application is invited from the Applicant and the Sponsor(s). The details of the scheme and the funding mechanism are available on the website at http://wellcomedbt.org/fellowshiptype/margdarshi-fellowships.</p>

<p>Application form can be accessed at https://fellowships.wellcomedbt.org/Login.aspx</p>

<p>Sponsored applications due by 2 May 2016</p>

<p>Send your inquiries to margdarshi@wellcomedbt.org</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26927/phylographer-graph-visualization-tool</guid>
	<pubDate>Wed, 06 Apr 2016 19:06:48 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26927/phylographer-graph-visualization-tool</link>
	<title><![CDATA[PhyloGrapher - Graph Visualization Tool]]></title>
	<description><![CDATA[<p><strong>PhyloGrapher</strong><span>&nbsp;is a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements).</span><strong>PhyloGrapher</strong><span>&nbsp;is a drawing tool that generates custom graphs for a given set of elements. In general, it is possible to use&nbsp;</span><strong>PhyloGrapher</strong><span>&nbsp;to visualize any type of relations between elements.&nbsp;</span></p>
<p><span>More at&nbsp;http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html</span></p><p>Address of the bookmark: <a href="http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html" rel="nofollow">http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html</a></p>]]></description>
	<dc:creator>Jitendra Prajapati</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/31523/research-associate-bioinformatics-recruitment-in-national-bureau-of-plant-genetic-resources</guid>
  <pubDate>Fri, 10 Mar 2017 06:50:51 -0600</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics recruitment in National Bureau of Plant Genetic Resources]]></title>
  <description><![CDATA[
<p>Name of Project  : Indo-UK Centre for improvement of Nitrogen use efficiency in wheat Dr. Soma S. Marla, Pr. Scientist (Bioinformatics), Division of Genomic Resources, ICAR, NBPGR, ND. </p>

<p>No. of Post : 01</p>

<p>Qualification : A doctoral (Ph.D). Degree in Bioinformatics OR 1. Masters degree in Bioinformatics or Computer Sciences having 1st division or 60% marks or equivalent overall grade point with at least two years of research experience as evidenced from Fellowship/ Associate ship. 2. NET or equivalent national level examination qualification is essential for the candidates with 3+2 years (B.Sc.+ M.Sc) pattern. Desirable: Demonstrated experience &amp; skills in database design, management, UNIX OS, HPC environment inbased NGS data analysis. Experience substantiated by publications of high quality will be preferred.</p>

<p>Emoluments : Rs. 40,000 (Ph.D)/ Rs + 30 % HRA; 38,000 (Masters) Degree + 30 % HRA.<br />Hiring Process : Walk - In<br />Job Role: Research/JRF/SRF</p>

<p>Candidates should appear by 10.00 AM on 16.03.2016 for registration with relevant documents in the room B4, Bioinformatics Lab, ICAR.NBPGR. old campus, Inderpuri, New Delhi.</p>

<p>The candidates who wish to attend the walk-in interview are requested to bring with them five copies of the CV (one copy with photograph) as per the format given below. Also, the candidates should bring the original documents such as DOB, degree certificates, marks sheets, publications, thesis, experience certificate etc. for verification.</p>

<p>http://www.nbpgr.ernet.in/Downloadfile.aspx?EntryId=7284</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27225/painless-package-development-for-r</guid>
	<pubDate>Tue, 03 May 2016 05:31:06 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27225/painless-package-development-for-r</link>
	<title><![CDATA[Painless package development for R]]></title>
	<description><![CDATA[<p>Devtools makes package development a breeze: it works with R&rsquo;s existing conventions for code structure, adding efficient tools to support the cycle of package development. With devtools, developing a package becomes so easy that it will be your default layout whenever you&rsquo;re writing a significant amount of code.</p>
<p>Before you get started be sure to check out:</p>
<ul>
<li><a href="https://groups.google.com/forum/#%21forum/rdevtools" title="Google devtools Group">devtools Google Group &ndash;&nbsp;https://groups.google.com/forum/#!forum/rdevtools</a></li>
<li><a href="http://adv-r.had.co.nz/" title="Hadley W Online Book">book on &ldquo;Advanced R programming&rdquo; &ndash;&nbsp;http://adv-r.had.co.nz/</a></li>
<li><a href="https://github.com/hadley/devtools" title="devtools GitHub">GitHub repository &ndash;&nbsp;https://github.com/hadley/devtools</a></li>
</ul>
<h3 id="getting_started">&nbsp;</h3><p>Address of the bookmark: <a href="https://www.rstudio.com/products/rpackages/devtools/" rel="nofollow">https://www.rstudio.com/products/rpackages/devtools/</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27240/bioinformatics-tutor-at-pgimer</guid>
  <pubDate>Wed, 04 May 2016 08:40:26 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Tutor at PGIMER]]></title>
  <description><![CDATA[
<p>Postgraduate Institute of Medical Education and Research (PGIMER) - Chandigarh, Chandigarh<br />₹9,300 - ₹34,800 a month<br />Postgraduate Institute of Medical Education and Research (PGIMER), Chandigarh invites Online Applications for recruitment of following Group 'A', 'B' and 'C' posts. The closing date for submission of online applications is up to 12th May 2016.</p>

<p>No of Vacancies: 01<br />Pay Scale: Rs. 9300-34800 + Grade Pay Rs. 4600/-</p>

<p>Educational Qualification and Experience: (From Recognized University / Institute) M.Sc. in Biotechnology, Molecular Biology, Human Genomics / Biochemistry / Biophysics.</p>

<p>Age Limit: 18-50 years</p>

<p>Please see Detailed Advertisement Link for full info: https://drive.google.com/file/d/0Bz3xO6e_7OeeZllINnRyWlN5UFE/view</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27291/summer-internship-positions-at-dupont</guid>
  <pubDate>Wed, 11 May 2016 08:05:54 -0500</pubDate>
  <link></link>
  <title><![CDATA[Summer internship positions at DuPont]]></title>
  <description><![CDATA[
<p>DuPont Industrial Biosciences has several summer internship positions<br />for undergrads available. We are looking for driven and creative interns<br />to conduct research in the following areas:</p>

<p>· Enzyme immobilization supports for select enzyme systems.</p>

<p>· New tools for microbial strain and genome engineering using<br />state-of-the-art methodologies.</p>

<p>· Rapid high throughput assays to screen microorganisms from various<br />sources for enzymatic activities of interest.</p>

<p>· High throughput combinatorial approaches to the formulation of growth<br />media in support of microbial enrichments, strain isolations and growth<br />optimization.</p>

<p>· Meta-transcriptomics for the discovery of new enzymes.</p>

<p>· Strain adaptation techniques in defined chemostat environments for<br />microbial strain development.</p>

<p>The internships are based at the Experimental Station R&amp;D Center in<br />Wilmington, DE.</p>

<p>If interested, apply fast!</p>

<p>For more information and to apply, go to:</p>

<p>http://careers.dupont.com/jobsearch/job-details/industrial-biosciences-summer-internship/008549W-10/</p>
]]></description>
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