BOL: Related items

IBM Research Computational Biology Center

Thu, 29 Aug 2013 08:43:59 -0500

The IBM Computational Biology Center embraces activities at Yorktown Heights, with strong affiliations with activities at Almaden and other IBM Research Centers. Computational Biology (CompBio) including bioinformatics is the study of how computer systems can manage, analyze, and simulate the complex structures and processes inherent in living systems. CompBio Research at IBM spans pattern recognition in sequences, structures and processes, the studying of systems ranging from single protein molecules through to complex molecular interactions, and the data analysis, interpretation and reverse-engineering of complex disease-lifestyle-genomic interactions for fuller biological understanding. "CompBio" has a flavor of its own independant of its parents, biology and computer science. Nonetheless, CompBio is inherently a multi- disciplinary field with important applications in biology, chemical physics, materials science, agriculture, chemistry and ultimately nanotechnology.

Seq: A high-performance, Pythonic language for bioinformatics

Rahul Nayak — Sat, 23 Nov 2019 08:58:12 -0600

Seq is a programming language for computational genomics and bioinformatics. With a Python-compatible syntax and a host of domain-specific features and optimizations, Seq makes writing high-performance genomics software as easy as writing Python code, and achieves performance comparable to (and in many cases better than) C/C++.

Learn more by following the tutorial or from the cookbook.

Address of the bookmark: https://seq-lang.org

May 17, 2013 - Differential Network Analysis

Wed, 04 Sep 2013 16:22:28 -0500

Steve Horvath presents Differential Network Analysis at the UCLA Human Genetics/Biostatistics Network Course

BioContainers

Jit — Thu, 20 Feb 2020 05:29:46 -0600

BioContainers is a community-driven project that provides the infrastructure and basic guidelines to create, manage and distribute bioinformatics packages (e.g conda) and containers (e.g docker, singularity). BioContainers is based on the popular frameworks Conda, Docker and Singularity.

Address of the bookmark: https://biocontainers.pro/#/

Project Fellow @ Alagappa University

Sat, 07 Sep 2013 14:24:13 -0500

Advertisement for the post of project Fellow in UGC project

Project Fellow – One Post

Duration: Three Years

Fellowship : Rs.14, 000/- per month + HRA

Walk-in-interview: 16th Sept, 2013 at 10.00 am

Venue : Department of Bioinformatics, Alagappa University

Eligible candidates can attend walk in interview for the post of Project Fellow in UGC supported project entitled “Shape and chemical feature based 3D- Pharmacophore Model generation, Virtual Screening and MESP studies to identify Potential Leads for Antifungal Azoles”

Interested candidates may apply to Dr. Sanjeev Kumar Singh, Principal Investigator, Department of Bioinformatics, Karaikudi with their Curriculum Vitae along with the copies of the certificates in proof of their educational qualification and experience at skysanjeev@gmail.com

Qualification:

PG Degree in Bioinformatics / Chemistry/ Molecular Biology/ Biotechnology / Biophysics / Biochemistry / Life Sciences/ Pharmacy with minimum of 55% marks in the PG examinations

Desirable:

Research experience in Molecular modeling and CADD will be given preference. UGC-NET/ CSIR-JRF qualified candidates will get preference.

The posts are purely on temporary basis. No TA/DA will be paid for attending the interview.

Advertisement: http://www.alagappauniversity.ac.in/files/news_files/new%20advt-UGC-16sept,13.doc

Bioinformatics-focused postdoctoral fellow

Fri, 23 Oct 2020 05:52:52 -0500

Jason Thomas Ladner currently recruiting for a bioinformatics-focused postdoctoral
fellow to join the group at the Pathogen and Microbiome Institute,
Northern Arizona University (http://www7.nau.edu/ladnerlab/). This
will be a multi-year, NIH-funded position focused on the development and
utilization of a novel platform for highly multiplexed antiviral serology,
which utilizes high-throughput sequencing technology.

To apply:
https://hr.peoplesoft.nau.edu/psp/ph92prta/EMPLOYEE/HRMS/c/HRS_HRAM.HRS_APP_SCHJOB.GBL?Page=HRS_APP_JBPST&Action=U&FOCUS=Applicant&SiteId=1&JobOpeningId=604999&PostingSeq=1

For more information, feel free to contact me: jason.ladner@nau.edu

Research Assistant @ NATIONAL BUREAU OF ANIMAL GENETIC RESOURCES

Tue, 03 Dec 2013 06:17:34 -0600

NATIONAL BUREAU OF ANIMAL GENETIC RESOURCES
Near Basant Vihar G.T. Road Bypass
P.O. Box No.129, Karnal-132001 (Haryana)

WALK-IN-INTERVIEW

A walk-in-Interview is proposed to be held at National Bureau of Animal Genetic Resources, Karnal (Haryana)-132001 at 11:30 AM on 18.12.2013 to select One RA and One SRF as per details given below:

1. One post of Research Associate under DBT sponsored Support under BIPP for the “SanGenix: A comprehensive Next Generation Sequence (NGS) data analysis solution” as Grants in AID. Thepost duration is Upto 31st March 2015 or earlier.

2. One post of Senior Research Fellow under NAIP (Component-4) Bioprospecting of genes and allele mining for abiotic stress tolerance. The post duration is Upto 31st March 2014 or earlier

Essential Qualifications: Ph.D. in Bioinformatics/ Computer Application or
First Class Masters degree in Bioinformatics/ Computer Application with two years experience as evidenced by Publications.

Desirable: Experience in the field of handling Next generation Sequencing Data.

Emolument: Rs. 22,000/- per month + HRA as per admissibility

Age Limit:

40 years for Men
45 years for women as on date of interview

Research Associate: ONE

Duration of engagement: Upto

31st March 2015 or earlier & Coterminus with the project

Responsibilities: To help the PI for Beta testing and development of the SanGenix Tool for NGS data.

Essential Qualifications: First Class Masters’ degree in Bioinformatics/Biotechnology.

Desirable: Experience in the field of Biotechnology/ Bioinformatics

Emoluments:

Rs. 16,000/- per month + HRA as per admissibility.
Senior Research Fellow: ONE
Duration of engagement: Upto 31st March 2014 or earlier & Coterminus with the project

Age Limit

35 years for men
40 years for women as on date of interview

Note: Relaxation in age will be admissible for SC/ST & OBC candidates as per Govt. of India /ICAR norms

1. The applicants must bring with them original documents and brief of research work done during post graduation along with a set of photocopy and latest two passport size photographs.
2. A panel of selected candidates will also be made which may be utilized for filling of positions of shorter durations in future if demand arises.
3. Experience certificate in original, if any 4. The above positions are purely on temporary basis and are co-terminus with the project. No TA/DA will be paid to attend the interview.
5. Any other clarifications can be had on the date of interview.
6. The Director’s decision will be final and binding on all respects.

Advertisement: http://210.212.93.85/rasrfadvertise.pdf

bioinformatics workbook

biogeek — Tue, 05 Jan 2021 22:42:32 -0600

This books assumes that the reader has some knowledge of biology and basic understanding of the Unix command line. However, for the beginner, the appendix contains introductory material and tips/tricks for common bioinformatic problems, that is referred to for more information throughout the book.

https://bioinformaticsworkbook.org/

Address of the bookmark: https://bioinformaticsworkbook.org/

Mathivanan Lab

Fri, 20 Sep 2013 13:09:38 -0500

The major research interests are in exploring the role of extracellular matrix components (soluble secreted proteins and membrane vesicles) in cancer and intercellular communication. The lab integrates proteomic, genomic and bioinformatics methodologies to explore cancer cells.

More at http://www.mathivananlab.org/index.html

http://scholar.google.com/citations?user=U6PyEdYAAAAJ&hl=en

Bioinformatics in Thailand !

Shruti Paniwala — Wed, 28 Apr 2021 02:04:56 -0500

Our international PhD and master programs are designed for students who desire focused training in the elements of biology, computer science, and information technology needed for a successful career in the exciting new discipline of Bioinformatics & Systems Biology. Students in our program will receive comprehensive training in omics analysis, database design and management, software engineering and programming (including web-based development), simulation techniques and modeling, and data integration. Each student will apply their skills to a practical project, where they will design and implement a solution to a real-world problem under the guidance of an experienced mentor in industry or academia.

https://bioinformatics.kmutt.ac.th/about.html

Duangrudee Tanramluk (Ajarn Wi) uses computational biology and machine learning to tackle the key to drug design problems via MANORAA webserver.

https://mb.mahidol.ac.th/en/bioinformatics/

https://graduate.mahidol.ac.th/inter/

This international Doctorate programme is designed to further broaden students’ knowledge in Bioinformatics and Molecular Biology to their maximum capability.

http://www.mbb.psu.ac.th/programmes/phd

Ph.D. program in Bioinformatics and Computational Biology is a joint effort of the Faculty of Science and Faculty of Medicine, Chulalongkorn University. The program has study plans for both applicants who hold a bachelor’s degree and applicants who hold a master’s degree in any related fields of study.

http://www.bioinfo.sc.chula.ac.th/ph-d-program-specialization/

Additional detail

https://www.biotec.or.th/en/index.php/research/research-units/genome-technology-research-unit

https://tbrcnetwork.org/labtbrc/index.php/bioinformatics-and-chemoinformatics/

https://genomicsthailand.com/Genomic/home

Address of the bookmark: https://bioinformatics.kmutt.ac.th/