BOL: Related items

Bioinformatics Training Courses At RASA LSI

RASA Life Sciences — Wed, 06 Nov 2019 00:30:51 -0600

RASA conducts comprehensive Life Science skill development training courses in Pune, India for working professionals, researchers, students and job-seeker. The trainings are crafted meticulously, covering different modules of courses such as Bioinformatics course, In silico Drug Discovery course, Next Generation Sequence data analysis course, Molecular Biology & Life science software development course wherein you learn from industry leaders how to apply these skills in life science & have a command over software developing process by using various methodologies. We conduct in-class training and instructor-led live online classes worldwide, along with corporate and skill development training worldwide.

Workshops are conducted in regular intervals on Drug Designing, Protein Modeling and Simulation, Chemoinformatics, Bioinformatics etc.The workshops are highly beneficial for working professionals, students, researcher for enhancements of the skills in short duration.

Scripts for the analysis of HGT in genome sequence data.

Jit — Wed, 29 Nov 2017 16:44:10 -0600

Scripts for the analysis of HGT in genome sequence data

Address of the bookmark: https://github.com/reubwn/hgt

Machine learning training and courses in bioinformatics !

Rahul Nayak — Tue, 31 Dec 2019 19:33:07 -0600

Machine learning techniques have been successful in analyzing biological data because of their capabilities in handling randomness and uncertainty of data noise and in generalization. In this class, we will learn basics about probabilistic models and machine learning techniques. We will focus on probabilistic models (Markov models, Hidden Markov models, and Bayesian networks) for biological sequence analysis and systems biology. Other machine learning techniques, such as Naive bayes, neural networks and SVMs will only be covered briefly.

More at http://homes.sice.indiana.edu/yye/lab/teaching/spring2017-I529/

GIGGLE: a search engine for large-scale integrated genome analysis

Jit — Wed, 10 Jan 2018 03:10:45 -0600

GIGGLE is a genomics search engine that identifies and ranks the significance of genomic loci shared between query features and thousands of genome interval files. GIGGLE (https://github.com/ryanlayer/giggle) scales to billions of intervals and is over three orders of magnitude faster than existing methods. Its speed extends the accessibility and utility of resources such as ENCODE, Roadmap Epigenomics, and GTEx by facilitating data integration and hypothesis generation.

https://www.nature.com/articles/nmeth.4556

Address of the bookmark: https://github.com/ryanlayer/giggle

Bioinformatician on Valentine's Day

BioQueen — Sun, 14 Feb 2021 11:36:32 -0600

Once asked to a bioinformatician "How is ur Valentine's Day?"

Bioinformatician replied:
if ($date == "Valentine's Day" && $me =! Bioinformatician) {
rose_day(); promise_day(); kiss_day();
}
else {
hack_genome(); ko-fi(); youtube(); do_scripting(); sleep();
)

Mesquite: A modular system for evolutionary analysis

Rahul Nayak — Tue, 13 Mar 2018 06:54:32 -0500

Mesquite is modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms. Its emphasis is on phylogenetic analysis, but some of its modules concern population genetics, while others do non-phylogenetic multivariate analysis. Because it is modular, the analyses available depend on the modules installed.

https://github.com/MesquiteProject/MesquiteCore

Address of the bookmark: http://mesquiteproject.org/

DBT BIOTECHNOLOGY ELIGIBILITY TEST (BET) 2020

Shruti Paniwala — Fri, 21 Aug 2020 09:17:24 -0500

Ministry of Science &Technology, Govt. of India

DBT-Junior Research Fellowship (DBT-JRF) in Biotechnology (2020)

BIOTECHNOLOGY ELIGIBILITY TEST (BET) 2020

Applications are invited from bonafide Indian citizens, residing in India for award of “DBT-Junior Research Fellowship” (DBT-JRF) for pursuing research in frontier areas of Biotechnology and Life Sciences. The candidates will be selected through “Biotechnology Eligibility Test (BET)”. Based on the performance in BET, two categories of merit list will be prepared (Category-I and Category-II). Government of India norms for reservation will be followed for selection. Candidates selected under category-I will be eligible to avail fellowship under the programme. These will be tenable at any University/Institute in India where the selected candidate registers for PhD Programme. Candidates selected under Category-II will be eligible to be appointed in any DBT sponsored project and avail fellowship from the project equivalent to NET/GATE, subject to selection through institutional selection process. There will be no binding on Principal Investigators of DBT sponsored projects to select JRF for their project from category-II list. Selection in category-II will not entitle student for any fellowship from DBT-JRF programme.

ELIGIBILITY

Qualification: M.Sc./ M.Tech./ M.V.Sc. or equivalent degree/ Integrated BS-MS/ B.E./ B.Tech. in any discipline of Biotechnology, M.Sc./ M.Tech. Bioinformatics/ Computational Biology, students admitted under DBT supported Postgraduate Teaching Programs. M.Sc. Life Science/ Bioscience/ Zoology/ Botany/ Microbiology/ Biochemistry/ Biophysics and Masters in Allied areas of Biology/Life Sciences. Candidates appearing in the final year examination are also eligible to apply.

Marks: Minimum 60% marks for General, EWS & OBC category and 55% for SC/ ST/ Differently abled in aggregate (or equivalent grade).

Age Limit: Upto 28 years as on the last date of application for General & EWS category. Age relaxation of up to 5 years (33 years) for SC/ ST/ Differently Abled/ women candidates and upto 3 years (31 years) for OBC (Non-Creamy Layer) candidates.

For detailed procedure for filling the application form, payment of application fee and uploading of required documents/ certificates in the prescribed format, please visit: http://rcb.res.in/BET2020. A non-refundable and non-transferable application fee of Rs. 1000/-is payable online by General/ OBC/ EWS candidates and Rs 250/- by SC/ ST/ Differently abled candidates.

IMPORTANT DATES

Online Registration Start	April 20, 2020
Online Registration Close	May 18, 2020
BET 2020	June 30, 2020 (Tuesday)* Tentative
Display of question paper and answer key on website	June 30, 2020
Last date of accepting representation of any discrepancy in Question paper & Answer key	July 03, 2020
Declaration of BET 2020 Result	July 20, 2020

snakepipes: A toolkit based on snakemake and python for analysis of NGS data

Jit — Thu, 30 May 2019 04:06:13 -0500

snakePipes are flexible and powerful workflows built using snakemake that simplify the analysis of NGS data.

DNA-mapping*
ChIP-seq*
RNA-seq*
ATAC-seq*
scRNA-seq
Hi-C
Whole Genome Bisulfite Seq/WGBS

(*Also available in "allele-specific" mode)

snakePipes can be installed via conda :

'conda install -c mpi-ie -c bioconda -c conda-forge snakePipes'.

Source code (https://github.com/maxplanck-ie/snakepipes) and documentation (https://snakepipes.readthedocs.io/en/latest/) are available online.

Address of the bookmark: https://github.com/maxplanck-ie/snakepipes

Scientist B at AIIMS, New Delhi, Delhi

Thu, 03 Sep 2020 07:04:11 -0500

Scientist B at AIIMS, New Delhi, Delhi

Overview
Applications are invited from eligible candidates for the following position under Meity funded research project entitled: Artifical Intelligence in Oncology, Harnsessing big data and advanced computing to provide personalized diganosis and treatment for cancer patients purely on contractual basis

Scientist B

Salary: Rs.80,000/-

Qualification: 1st Class Masters Degree in Bioinformatics/ Computer Science/ Statistics with Ph.D in relevant subject from a recognized University with experience in Machine learning/ AI project plus two years research experience

Age: Upto 40 years

Details
Experience:2 Years
Location:New Delhi
Education:1st Class Masters Degree
SALARY: Rs.80,000/-
Key Skills: Research Fellowship
Desired Profile
Two years research experience

Company: AIIMS
All India Institute of Medical Sciences, New Delhi is a medical school, hospital and public medical research university

More at https://www.aiims.edu/en/notices/recruitment/aiims-recruitment.html?id=10844
PDF https://www.aiims.edu/images/pdf/recruitment/advertisement/Post_BioChem_22_08_20.PDF

Doctoral researcher (PhD) in Computational Biology / Biostatistics at Luxembourg Centre for Systems Biomedicine (LCSB)

Sun, 25 Oct 2020 22:59:54 -0500

Contract Type: Fixed Term Contract
Work Hours: Full Time 40.0 Hours per Week
Location: Belval
Student and employee status (36 months studies programme, as per university standards) with project funding available for up to 48 months
36 months fixed-term contract (renewable depending on thesis progress evaluation)
Job Reference: UOL03604
Further Information
Applications should be submitted online and include:

A detailed Curriculum vitae
A motivation letter, including a brief description of past research experience and future interests, as well as the earliest possible starting date
Copies of degree certificates and transcripts
Name and contact details of at least two referees
Early application is highly encouraged, as the applications will be processed upon reception. Please apply ONLINE formally through the HR system. Applications by email will not be considered.

*gn=gender neutral.

More at https://recruitment.uni.lu/en/details.html?id=QMUFK026203F3VBQB7V7VV4S8&nPostingID=54876&nPostingTargetID=74639&mask=karriereseiten&lg=UK