Jit
Enthusiast computational biologist with business dream !!!
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PGAP-X: Extension on pan-genome analysis pipeline
By Rahul Nayak 2496 days agohttps://pgapx.ybzhao.com/ - PGAP-X is a microbial comparative genomic analysis platform with graphic interface. Serials of algorithms and methodologies have been developed and integrated to analyze and visualize genomics structure variation, gene distribution with different...bpRNA: large-scale automated annotation and analysis of RNA secondary structure
By Rahul Nayak 2376 days agogithub.com - bpRNA, a novel annotation tool capable of parsing RNA structures, including complex pseudoknot-containing RNAs, to yield an objective, precise, compact, unambiguous, easily-interpretable description of all loops, stems, and pseudoknots, along with...Bioinformatics Scientist/Research Software Engineer at University of Dundee Dundee, United Kingdom
We are recruiting for an exceptional individual to join us as a computational scientist, bioinformatician, or (research) software engineer with an interest in interactive data analysis platforms for biology and medicine within our Jalview...Environment for Tree Exploration (ETE) is a Python programming toolkit that assists in the...
By Rahul Nayak 1823 days agopypi.org - The Environment for Tree Exploration (ETE) is a Python programming toolkit that assists in the recontruction, manipulation, analysis and visualization of phylogenetic trees (although clustering trees or any other tree-like data structure are also...Two Faculty Positions at National Taiwan University, Taipei, Taiwan
The Department of Agronomy at National Taiwan University, Taipei, Taiwan, invites applications for two full-time faculty positions beginning August 1, 2021 at the rank of Assistant Professor, Associate Professor or Professor in Biometry and...netGO: R-Shiny package for network-integrated pathway enrichment analysis
By Jit 1746 days agogithub.com - netGO is an R/Shiny package for network-integrated pathway enrichment analysis.netGO provides user-interactive visualization of enrichment analysis results and related networks. Currently, netGO supports analysis for four species...Edanchin Lab
My main topics of interest are: The impact of non tree-like evolution such as horizontal gene transfers and hybridization on species biology Evolution and adaptation of animals in the absence of sexual reproduction and the underlying...
Sample bandage input file for visual analysis
By Jit 1417 days agoSample bandage input file for visual analysis ...Introduction to Bioinformatics and Computational Biology
By Jit 1399 days agoliulab-dfci.github.io - This is the course material for STAT115/215 BIO/BST282 at Harvard University. Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue Ming TangYang LiuJack KangScarlett GeJiazhen RongPhillip NicolMaartin De Vries We...Breedbase is a comprehensive breeding management and analysis software
By BioStar 1417 days agohttps://breedbase.org/ - Breedbase is a comprehensive breeding management and analysis software. It can be used to design field layouts, collect phenotypic information using tablets, support the collection of genotyping samples in a field, store large amounts of high...
