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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/32709?offset=570</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/2759/dynamic-programming-alignment</guid>
	<pubDate>Thu, 22 Aug 2013 09:38:28 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/2759/dynamic-programming-alignment</link>
	<title><![CDATA[Dynamic Programming Alignment]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/EWJnDMKBEv0" frameborder="0" allowfullscreen></iframe>lecture 9, Chem. C100, Spring 2013, UCLA]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/45133/postdoctoral-position-in-evolutionary-genomics-and-bioinformatics-at-the-center-for-interdisciplinary-neuroscience-at-university-of-valparaiso-valparaiso-chile</guid>
  <pubDate>Wed, 22 Apr 2026 02:36:00 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Position in Evolutionary Genomics and Bioinformatics, at the Center for Interdisciplinary Neuroscience at University of Valparaiso, Valparaiso, Chile.]]></title>
  <description><![CDATA[
<p>The Center for Interdisciplinary Neuroscience of Valparaiso (CINV)<br />in Valparaiso, Chile, invites postdoctoral researchers to apply for<br />a Postdoctoral Fellowship focusing on understanding the evolution of<br />genes and molecular pathways that play a role on inflammatory processes<br />driving diseases affecting the central nervous system.</p>

<p>The postdoctoral researcher will contribute to this project using<br />a combination of evolutionary and comparative genomics, as well as a<br />diverse set of bioinformatic approaches for data analysis and integration<br />(e.g., transcriptomics, genomics, phenotypic data). This position offers<br />a unique opportunity to integrate diverse state-of-the-art genomic and<br />phenotypic datasets across different model organisms to understand the<br />role of genes, molecular pathways in the origin of complex diseases.</p>

<p>CINV provides a highly collaborative and multidisciplinary environment<br />using a variety of computational and experimental approaches,<br />including genetically tractable animal models as well as expertise in<br />genetics, behavior, glia-neuron communication, metabolism, biophysics,<br />genomics, bioinformatics, host-microbe communication, and biomolecular<br />modelling. The new postdoc will be part of one of our labs which focuses<br />more generally on the intersection between molecular evolution and<br />disease biology.</p>

<p>Required qualifications are a PhD in evolutionary biology, computational<br />biology, bioinformatics, or closely related fields. Candidates must have<br />excellent verbal and written communication skills (working language<br />is English), as well as an established record of productivity (e.g.,<br />at least one previous peer-reviewed publication). Candidates with a<br />past record of publications in bioinfomatics, computational biology,<br />population genetics or evolutionary genomics are strongly preferred. Ideal<br />candidates should have experience in analyzing genomic and phenomic<br />data, performing comparative evolution or population genomic analyses,<br />as well as in collaborating with experimentalists.</p>

<p>Interested candidates should first contact Evandro Ferrada at<br />. Please include the following: (1) a cover<br />letter addressing your interest in the position and how your expertise<br />meets the position requirements, (2) a CV, (3) contact information of<br />at least 2 references. A short online interview will follow to discuss<br />specific proposals. Candidate materials will be reviewed as soon as<br />possible until the position is filled.</p>

<p>For further information, please visit:<br />https://cinv.uv.cl/cinv-postdoctoral-fellowship-program-2026/</p>

<p>Dr. Evandro Ferrada<br />Associate Profesor</p>

<p>Centro Interdisciplinario de Neurociencia (CINV)</p>

<p>Facultad de Ciencias, Universidad de Valpara�so.</p>

<p>Pasaje Harrington 287, Playa Ancha, Valpara�so, Chile.</p>

<p>Tel.  +56 (32) 250 8453</p>

<p>www.cinv.cl</p>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/4178/phd-position-in-biochemistry-towards-bioinformatics-at-the-department-of-biochemistry-and-biophysics</guid>
  <pubDate>Tue, 03 Sep 2013 06:09:03 -0500</pubDate>
  <link></link>
  <title><![CDATA[PhD position in biochemistry towards bioinformatics at the Department of Biochemistry and Biophysics.]]></title>
  <description><![CDATA[
<p>PhD position in biochemistry towards bioinformatics at the Department of Biochemistry and Biophysics. Reference number: SU FV-2293-13. Deadline for application: September 10, 2013.</p>

<p>Project title: Functional Inference from Domain Architecture and Orthology</p>

<p>Requirements</p>

<p>To be accepted as a PhD student, credits corresponding to four years of full-time studies at the undergraduate level are required, including credits corresponding to at least two years of fulltime studies in chemistry, life sciences or physics, depending on the program. The credits should include courses at the advanced level (second cycle) corresponding to one year and of these one semester should be a degree thesis. In order to facilitate the evaluation of merits and suitability for the PhD studies the curriculum vitae (CV) should contain information about the extent and focus of the academic studies. The quantity (as part of an academic year) and the quality mark of courses in chemistry and physics are of particular interest. The title, number of credits and the length in full-time months of undergraduate thesis and project work, should be specified.</p>

<p>Information</p>

<p>More information about the project can be provided by the project leader. General information about the PhD training program may be requested from the director of graduate studies, Stefan Nordlund, stefan@dbb.su.se or from Lena Mäler, Head of Department (prefekt), lenam@dbb.su.se</p>

<p>Further information on the web:</p>

<p>The Department of Biochemistry and Biophysics: www.dbb.su.se</p>

<p>Stockholm University: www.su.se/english</p>

<p>Faculty of Science: www.science.su.se/english</p>

<p>The handbook for postgraduate students: www.doktorandhandboken.nu/english</p>

<p>Application The application should contain a personal letter (a letter of intent explaining why you are interested in the specific project, why you are interested in studying for a PhD, what you hope to accomplish during your PhD studies, and what skills you can bring to this project), a curriculum vitae, a list of two persons who may act as referees (with telephone numbers and e-mail addresses), copies of degree certificates and transcripts of academic records, and a copy of your undergraduate thesis and articles, if any.</p>

<p>In order to apply for this position, please use the Stockholm University web-based application form (where it is possible to select language):</p>

<p>To the application form for this position.</p>

<p>Welcome with your application no later than September 10, 2013.</p>

<p>Project leader: Erik Sonnhammer, Erik.Sonnhammer@sbc.su.se,<br />www.sonnhammer.sbc.su.se</p>

<p>Advertisement: http://www.su.se/english/about/vacancies/phd-studies/phd-position-in-biochemistry-towards-bioinformatics-1.143446</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/45316/from-genes-to-algorithms-the-ai-revolution-in-bioinformatics</guid>
	<pubDate>Wed, 16 Sep 2026 02:23:40 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/45316/from-genes-to-algorithms-the-ai-revolution-in-bioinformatics</link>
	<title><![CDATA[From Genes to Algorithms: The AI Revolution in Bioinformatics]]></title>
	<description><![CDATA[<p>Imagine waking up to a message from your doctor saying your genetic profile has been analyzed and a small change in your DNA has been found that could raise your risk for a certain disease. Instead of being alarmed, you learn that the condition was caught early and your genetic information can help doctors find treatments that might work better for you. Not long ago, this would have seemed like science fiction. But thanks to the rapid progress of artificial intelligence (AI) and bioinformatics, it is becoming more realistic. Bioinformatics brings together biology, computer science, mathematics, and statistics to collect, manage, and analyze biological data. As new technologies produce huge amounts of genomic, transcriptomic, proteomic, and clinical data, traditional methods often cannot keep up. AI is now playing a bigger role in bioinformatics, helping researchers find patterns, make predictions, and understand biological systems in ways that were once out of reach.</p><p>Modern sequencing technologies have turned biology into a data-heavy science. The human genome has about three billion DNA base pairs, and sequencing can produce massive datasets quickly. Bioinformatics helps organize and interpret this information, allowing scientists to compare genomes, find genes, spot genetic differences, study gene expression, and understand diseases at the molecular level. Now, AI is changing how these datasets are analyzed. Machine learning and deep learning can find complex patterns in biological data and make predictions using large datasets. Rather than following only set rules, AI systems can learn from data and help researchers solve tough biological problems.</p><p>A key example of AI in bioinformatics is predicting protein structures. Proteins are vital for many functions in living things, and their three-dimensional shapes are closely tied to what they do. For a long time, figuring out these structures in the lab was slow and difficult. AI-based tools like AlphaFold have shown that deep learning can predict protein structures with impressive accuracy. These advances help speed up biological research and give scientists useful predictions to support their experiments. This shift means bioinformatics is moving from just analyzing biological data to predicting how biology works and designing new solutions.</p><p>AI is also expected to greatly influence drug discovery. Traditionally, developing a new drug is a long and costly process that involves finding biological targets, searching for possible drug molecules, testing how well they work, studying their properties, and running many experiments. AI can help researchers analyze large chemical and biological datasets, predict how molecules might interact with targets, find promising compounds, and estimate properties of drug candidates. Generative AI can even help design new molecules to test in the lab. This does not mean lab experiments will go away, but AI can help researchers focus on the best options and possibly speed up some parts of drug development.</p><p>Personalized medicine is another area where AI-driven bioinformatics could make a big difference. Each person has a unique mix of genetic, molecular, environmental, and lifestyle factors, so people with the same disease might respond differently to the same treatment. Bioinformatics lets researchers study individual biological data, and AI can combine many types of information, like genetic data, gene expression, protein levels, medical images, clinical records, and drug responses. In the future, this could help doctors look beyond just the disease and focus on the specific biology of each patient. This would support more personalized ways to diagnose, assess risk, and choose treatments.</p><p>As AI becomes more common, the job of bioinformaticians will likely change. Instead of spending most of their time on repetitive computer tasks, they may focus more on creating research questions, understanding AI results, checking predictions, and linking computer findings to lab experiments. Future professionals will need to know about molecular biology, genetics, statistics, programming, machine learning, data science, databases, and computational biology. But technical skills alone will not be enough. Being able to ask good scientific questions and carefully judge computer results will be even more important, since AI can make predictions, but scientists must decide if those predictions make sense and can be proven in the lab.</p><p>Even with its great potential, using AI in bioinformatics comes with big challenges. AI systems rely on the quality and variety of the data they are trained on. Biological and clinical datasets can have missing information, technical errors, inconsistent measurements, and may not represent all groups equally. A model that works well on one dataset might not work as well on another group or in a different setting. That is why data quality, proper validation, transparency, reproducibility, and careful model development are crucial for the future of AI in bioinformatics. Researchers also need to think about genetic privacy, data ownership, security, and using personal biological information responsibly. These concerns are especially important when AI predictions are used in healthcare.</p><p>The lab of the future may look very different from today&rsquo;s. Researchers might use AI to review scientific papers, find research questions, analyze large datasets, come up with ideas, and predict which experiments will be most helpful. Automated lab systems could then run these experiments, create new data, and send the results back to computer models. This would create a cycle of making guesses, predicting, experimenting, collecting data, and learning. This approach could speed up scientific discovery by helping researchers explore questions more efficiently. Bioinformatics could become a key link between computer predictions and real lab experiments.</p><p>In the end, the future of bioinformatics with AI will not be about replacing people with machines. It will be about humans and AI working together. Computers can handle huge amounts of biological data and spot patterns that a single person could not. But humans bring scientific understanding, creativity, critical thinking, ethical judgment, and the ability to see the bigger picture. AI might find a pattern in millions of genomes, but scientists need to figure out why it matters. An AI model could suggest a new drug, but researchers must check if it is safe and works well. A computer might find a genetic change, but doctors have to decide what it means for a real patient.</p><p>The future of bioinformatics is closely tied to the future of AI. As biological data grows and AI models get better, bioinformatics may shift from mainly analyzing data to predicting biological processes, designing new molecules, speeding up experiments, and supporting personalized healthcare. For students and researchers, this is an exciting chance to work where biology and technology meet. The most successful people will not just be those who use the latest AI tools, but those who understand biology well enough to ask good questions and judge the answers carefully. The future will not be about AI versus humans, but about people and AI working together to understand life in ways we never could before. The next big discovery may come from this partnership between a biological question, a computer model, a lab experiment, and human curiosity.</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/2931/senior-bioinformatics-programmer-and-srf-at-biotech-park-lucknow</guid>
  <pubDate>Fri, 23 Aug 2013 04:55:51 -0500</pubDate>
  <link></link>
  <title><![CDATA[Senior Bioinformatics Programmer and SRF at  BIOTECH PARK Lucknow]]></title>
  <description><![CDATA[
<p>BIOTECH PARK</p>

<p>Advt. No. 3 (8)/BP/13</p>

<p>A walk-in-interview will be held in the Biotech Park Office at Sector G, Jankipuram, Kursi Road, Lucknow (U.P.) August 27, 2013 at 11.00 a.m. for the following posts of DBT sponsored project tenable at Biotech Park. Interested candidates fulfilling the requisite qualifications, experience and age as given below, may appear on the date of interview, before the Selection Committee. The candidate will have to join immediately.</p>

<p>INTERVIEW ON August 27, 2013 at 11.00 A.M.</p>

<p>2. SENIOR PROGRAMMER (ONE POST)</p>

<p>a)  Educational Qualification M.Sc. Bioinformatics with minimum 60% marks with two years of relevant experience or B.Tech. Bioinformatics or Biotechnology with minimum 60% marks with two years experience in Bioinformatics.</p>

<p>b) Job Requirement Development of databases in multi user environment and application softwares, maintenance of website, Drug designing and QSAR study etc.</p>

<p>c) Desirable Knowledge of Bioinformatics tools, Windows, Linux, C++, JAVA / JAVA Script, Visual Basic, CGI, DBMS/RDBMS and HTML. Experience in various domains of bioinformatics such as structure based drug designing, Newtonian dynamics and OSAR studies.</p>

<p>d)  Age  Below 35 years (as on the date of interview)</p>

<p>e) Emoluments  Rs. 12,000/- per month fixed.</p>

<p>Appointment will be made initially for one year extendable on satisfactory performance till the duration of the project.</p>

<p>3. SENIOR RESEARCH FELLOW: (ONE POST)</p>

<p>a)  Educational Qualification M.Sc. in Biotechnology/Botany with minimum 60% marks and knowledge of handling database &amp; database searching.</p>

<p>b) Essential Qualification Expertise in windows, Microsoft excel.</p>

<p>c) Desirable Good knowledge of statistical software packages like SPSS.</p>

<p>d) Age Below 35 years ( as on the date of interview)</p>

<p>e) Job Requirement: Management of database &amp; website in multi user environment, computation of biological field data and generation of reports.</p>

<p>f) Emoluments</p>

<p>18000+ HRA for Net/GATE qualified<br />14000+ HRA for others</p>

<p>The appointment will be made till the duration of project.</p>

<p>Note: All the candidates should report for interview on or before 10.45 A.M.</p>

<p>General Conditions</p>

<p>    The aforesaid positions are purely temporary and do not give the incumbent any right whatsoever for appointment on regular basis.<br />    More Advertisement: http://www.biotechpark.org.in/html/jobs%20in%20Biotech%20Park/Job_2013_04.htm</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4042/a-brief-introduction-to-genetics</guid>
	<pubDate>Wed, 28 Aug 2013 06:49:38 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4042/a-brief-introduction-to-genetics</link>
	<title><![CDATA[A Brief Introduction to Genetics]]></title>
	<description><![CDATA[<iframe src="http://player.vimeo.com/video/20898800?byline=0" width="" height="" frameborder="0" webkitAllowFullScreen allowFullScreen></iframe>A Brief Introduction to Genetics is a short documentary film that explores the history of genetics & genomics and the underlying concepts that provide the foundational knowledge that today's research is built upon. The film describes the history of genetics, from Gregor Mendel, to concepts such as DNA and the genetic code. Having introduced the fundamental ideas of genetics, the film moves on to describe the current techniques used to study genetics. Finally, the film explores the connection of these core concepts to genomics and bioinformatics.]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/2631/what-junk-dna-it%E2%80%99s-an-operating-system</guid>
	<pubDate>Mon, 19 Aug 2013 15:24:26 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/2631/what-junk-dna-it%E2%80%99s-an-operating-system</link>
	<title><![CDATA[What Junk DNA? It’s an Operating System]]></title>
	<description><![CDATA[<p>The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as &ldquo;junk DNA,&rdquo; is more than functionless, space-filling material that happens to make up nearly 98% of the genome. The paper adds to a growing body of knowledge establishing a considerable role for this material in the regulation of gene expression and its potential role in human disease.</p><p>Address of the bookmark: <a href="http://www.genengnews.com/keywordsandtools/print/3/32115/" rel="nofollow">http://www.genengnews.com/keywordsandtools/print/3/32115/</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4108/tijana-milenkovic-lab</guid>
  <pubDate>Fri, 30 Aug 2013 06:45:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[Tijana Milenkovic Lab]]></title>
  <description><![CDATA[
<p>Complex networks and network mining: developing graph theoretic, mathematical, and computational algorithms for efficient extraction of function from topology of complex real-world networks, such as biological, social, and technological networks.</p>

<p>Computational and systems biology: studying the interplay between network topology and biological function, disease, and evolution in molecular (e.g., protein-protein interaction) networks.</p>

<p>Computational chemistry: protein folding; computational drug discovery and design.</p>

<p>Synthetic biology.</p>

<p>More at http://www.cse.nd.edu/~tmilenko/index.html</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/3029/bioinformatics-market-in-india</guid>
	<pubDate>Fri, 23 Aug 2013 07:08:49 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/3029/bioinformatics-market-in-india</link>
	<title><![CDATA[Bioinformatics market in India]]></title>
	<description><![CDATA[<div><strong>Key Topics Covered in the Report:</strong></div>
<ul>
<li>The market size of the Indian Bioinformatics Industry , FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market segmentation of India bioinformatics industry by application by sectors, FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market Segmentation of India bioinformatics industry by products and services,FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market Segmentation of India bioinformatics industry by applications of bioinformatics ,FY&rsquo;2007-FY&rsquo;2013</li>
<li>India bioinformatics industry trends and developments</li>
<li>Government regulations and initiatives of India bioinformatics industry</li>
<li>Major bioinformatics research institutes in India</li>
<li>Market Share of leading players in bioinformatics industry in India,FY&rsquo;2013</li>
<li>Company profiles of major players in India bioinformatics industry</li>
<li>Future outlook and projections on the basis of revenue in India bioinformatics market, FY&rsquo;2014-FY&rsquo;2018</li>
</ul>
<p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;(Source: Ken Research)</p><p>Address of the bookmark: <a href="http://www.kenresearch.com/healthcare/biotechnology/india-bioinformatics-industry-research-report/392-91.html" rel="nofollow">http://www.kenresearch.com/healthcare/biotechnology/india-bioinformatics-industry-research-report/392-91.html</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4234/ncbi-psi-blast-tutorial</guid>
	<pubDate>Wed, 04 Sep 2013 11:46:06 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4234/ncbi-psi-blast-tutorial</link>
	<title><![CDATA[NCBI PSI-BLAST Tutorial]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/T3kHEieyylk" frameborder="0" allowfullscreen></iframe>http:--www.biotechnology.jhu.edu-
Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the
Basic Local Alignment Search tool and will protein and DNA sequences that
are related to a sequence that the user provides.]]></description>
	
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