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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/32719?offset=1160</link>
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	<description><![CDATA[]]></description>
	
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/45133/postdoctoral-position-in-evolutionary-genomics-and-bioinformatics-at-the-center-for-interdisciplinary-neuroscience-at-university-of-valparaiso-valparaiso-chile</guid>
  <pubDate>Wed, 22 Apr 2026 02:36:00 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Position in Evolutionary Genomics and Bioinformatics, at the Center for Interdisciplinary Neuroscience at University of Valparaiso, Valparaiso, Chile.]]></title>
  <description><![CDATA[
<p>The Center for Interdisciplinary Neuroscience of Valparaiso (CINV)<br />in Valparaiso, Chile, invites postdoctoral researchers to apply for<br />a Postdoctoral Fellowship focusing on understanding the evolution of<br />genes and molecular pathways that play a role on inflammatory processes<br />driving diseases affecting the central nervous system.</p>

<p>The postdoctoral researcher will contribute to this project using<br />a combination of evolutionary and comparative genomics, as well as a<br />diverse set of bioinformatic approaches for data analysis and integration<br />(e.g., transcriptomics, genomics, phenotypic data). This position offers<br />a unique opportunity to integrate diverse state-of-the-art genomic and<br />phenotypic datasets across different model organisms to understand the<br />role of genes, molecular pathways in the origin of complex diseases.</p>

<p>CINV provides a highly collaborative and multidisciplinary environment<br />using a variety of computational and experimental approaches,<br />including genetically tractable animal models as well as expertise in<br />genetics, behavior, glia-neuron communication, metabolism, biophysics,<br />genomics, bioinformatics, host-microbe communication, and biomolecular<br />modelling. The new postdoc will be part of one of our labs which focuses<br />more generally on the intersection between molecular evolution and<br />disease biology.</p>

<p>Required qualifications are a PhD in evolutionary biology, computational<br />biology, bioinformatics, or closely related fields. Candidates must have<br />excellent verbal and written communication skills (working language<br />is English), as well as an established record of productivity (e.g.,<br />at least one previous peer-reviewed publication). Candidates with a<br />past record of publications in bioinfomatics, computational biology,<br />population genetics or evolutionary genomics are strongly preferred. Ideal<br />candidates should have experience in analyzing genomic and phenomic<br />data, performing comparative evolution or population genomic analyses,<br />as well as in collaborating with experimentalists.</p>

<p>Interested candidates should first contact Evandro Ferrada at<br />. Please include the following: (1) a cover<br />letter addressing your interest in the position and how your expertise<br />meets the position requirements, (2) a CV, (3) contact information of<br />at least 2 references. A short online interview will follow to discuss<br />specific proposals. Candidate materials will be reviewed as soon as<br />possible until the position is filled.</p>

<p>For further information, please visit:<br />https://cinv.uv.cl/cinv-postdoctoral-fellowship-program-2026/</p>

<p>Dr. Evandro Ferrada<br />Associate Profesor</p>

<p>Centro Interdisciplinario de Neurociencia (CINV)</p>

<p>Facultad de Ciencias, Universidad de Valpara�so.</p>

<p>Pasaje Harrington 287, Playa Ancha, Valpara�so, Chile.</p>

<p>Tel.  +56 (32) 250 8453</p>

<p>www.cinv.cl</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/87/linux-cheat-sheet</guid>
	<pubDate>Tue, 09 Jul 2013 17:30:04 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/87/linux-cheat-sheet</link>
	<title><![CDATA[Linux Cheat Sheet]]></title>
	<description><![CDATA[<p><span>In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.</span></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/87" length="81260" type="application/pdf" />
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/45316/from-genes-to-algorithms-the-ai-revolution-in-bioinformatics</guid>
	<pubDate>Wed, 16 Sep 2026 02:23:40 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/45316/from-genes-to-algorithms-the-ai-revolution-in-bioinformatics</link>
	<title><![CDATA[From Genes to Algorithms: The AI Revolution in Bioinformatics]]></title>
	<description><![CDATA[<p>Imagine waking up to a message from your doctor saying your genetic profile has been analyzed and a small change in your DNA has been found that could raise your risk for a certain disease. Instead of being alarmed, you learn that the condition was caught early and your genetic information can help doctors find treatments that might work better for you. Not long ago, this would have seemed like science fiction. But thanks to the rapid progress of artificial intelligence (AI) and bioinformatics, it is becoming more realistic. Bioinformatics brings together biology, computer science, mathematics, and statistics to collect, manage, and analyze biological data. As new technologies produce huge amounts of genomic, transcriptomic, proteomic, and clinical data, traditional methods often cannot keep up. AI is now playing a bigger role in bioinformatics, helping researchers find patterns, make predictions, and understand biological systems in ways that were once out of reach.</p><p>Modern sequencing technologies have turned biology into a data-heavy science. The human genome has about three billion DNA base pairs, and sequencing can produce massive datasets quickly. Bioinformatics helps organize and interpret this information, allowing scientists to compare genomes, find genes, spot genetic differences, study gene expression, and understand diseases at the molecular level. Now, AI is changing how these datasets are analyzed. Machine learning and deep learning can find complex patterns in biological data and make predictions using large datasets. Rather than following only set rules, AI systems can learn from data and help researchers solve tough biological problems.</p><p>A key example of AI in bioinformatics is predicting protein structures. Proteins are vital for many functions in living things, and their three-dimensional shapes are closely tied to what they do. For a long time, figuring out these structures in the lab was slow and difficult. AI-based tools like AlphaFold have shown that deep learning can predict protein structures with impressive accuracy. These advances help speed up biological research and give scientists useful predictions to support their experiments. This shift means bioinformatics is moving from just analyzing biological data to predicting how biology works and designing new solutions.</p><p>AI is also expected to greatly influence drug discovery. Traditionally, developing a new drug is a long and costly process that involves finding biological targets, searching for possible drug molecules, testing how well they work, studying their properties, and running many experiments. AI can help researchers analyze large chemical and biological datasets, predict how molecules might interact with targets, find promising compounds, and estimate properties of drug candidates. Generative AI can even help design new molecules to test in the lab. This does not mean lab experiments will go away, but AI can help researchers focus on the best options and possibly speed up some parts of drug development.</p><p>Personalized medicine is another area where AI-driven bioinformatics could make a big difference. Each person has a unique mix of genetic, molecular, environmental, and lifestyle factors, so people with the same disease might respond differently to the same treatment. Bioinformatics lets researchers study individual biological data, and AI can combine many types of information, like genetic data, gene expression, protein levels, medical images, clinical records, and drug responses. In the future, this could help doctors look beyond just the disease and focus on the specific biology of each patient. This would support more personalized ways to diagnose, assess risk, and choose treatments.</p><p>As AI becomes more common, the job of bioinformaticians will likely change. Instead of spending most of their time on repetitive computer tasks, they may focus more on creating research questions, understanding AI results, checking predictions, and linking computer findings to lab experiments. Future professionals will need to know about molecular biology, genetics, statistics, programming, machine learning, data science, databases, and computational biology. But technical skills alone will not be enough. Being able to ask good scientific questions and carefully judge computer results will be even more important, since AI can make predictions, but scientists must decide if those predictions make sense and can be proven in the lab.</p><p>Even with its great potential, using AI in bioinformatics comes with big challenges. AI systems rely on the quality and variety of the data they are trained on. Biological and clinical datasets can have missing information, technical errors, inconsistent measurements, and may not represent all groups equally. A model that works well on one dataset might not work as well on another group or in a different setting. That is why data quality, proper validation, transparency, reproducibility, and careful model development are crucial for the future of AI in bioinformatics. Researchers also need to think about genetic privacy, data ownership, security, and using personal biological information responsibly. These concerns are especially important when AI predictions are used in healthcare.</p><p>The lab of the future may look very different from today&rsquo;s. Researchers might use AI to review scientific papers, find research questions, analyze large datasets, come up with ideas, and predict which experiments will be most helpful. Automated lab systems could then run these experiments, create new data, and send the results back to computer models. This would create a cycle of making guesses, predicting, experimenting, collecting data, and learning. This approach could speed up scientific discovery by helping researchers explore questions more efficiently. Bioinformatics could become a key link between computer predictions and real lab experiments.</p><p>In the end, the future of bioinformatics with AI will not be about replacing people with machines. It will be about humans and AI working together. Computers can handle huge amounts of biological data and spot patterns that a single person could not. But humans bring scientific understanding, creativity, critical thinking, ethical judgment, and the ability to see the bigger picture. AI might find a pattern in millions of genomes, but scientists need to figure out why it matters. An AI model could suggest a new drug, but researchers must check if it is safe and works well. A computer might find a genetic change, but doctors have to decide what it means for a real patient.</p><p>The future of bioinformatics is closely tied to the future of AI. As biological data grows and AI models get better, bioinformatics may shift from mainly analyzing data to predicting biological processes, designing new molecules, speeding up experiments, and supporting personalized healthcare. For students and researchers, this is an exciting chance to work where biology and technology meet. The most successful people will not just be those who use the latest AI tools, but those who understand biology well enough to ask good questions and judge the answers carefully. The future will not be about AI versus humans, but about people and AI working together to understand life in ways we never could before. The next big discovery may come from this partnership between a biological question, a computer model, a lab experiment, and human curiosity.</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/396/bioinformatics-introduction-to-perl</guid>
	<pubDate>Thu, 11 Jul 2013 09:49:37 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/396/bioinformatics-introduction-to-perl</link>
	<title><![CDATA[Bioinformatics: Introduction to PERL]]></title>
	<description><![CDATA[<p>This course is aimed at those new to programming and provides an introduction to programming using <strong>Perl</strong>. By the end of this course, attendees should be able to write simple <strong>Perl</strong> programs and to understand more complex <strong>Perl</strong> programs written by others. The course will be taught using the online <a href="http://sofiarobb.com/learning-perl-toc/" title="http://sofiarobb.com/learning-perl-toc/">Learning Perl</a> materials created by <a href="http://stajich.bioinformatics.ucr.edu/members/sofia-robb" title="http://stajich.bioinformatics.ucr.edu/members/sofia-robb">Sofia Robb</a> of the <a href="http://www.ucr.edu/" title="http://www.ucr.edu/">University of California Riverside</a>. Further information is <a href="http://ruddles.bio.cam.ac.uk/%7Edpjudge/Descriptions/PERL.php" title="http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/PERL.php">available</a>.</p>]]></description>
	<dc:creator>Archana Malhotra</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/842/ngs-bioinformatics-summit-europe</guid>
  <pubDate>Sat, 13 Jul 2013 17:02:34 -0500</pubDate>
  <link></link>
  <title><![CDATA[NGS &amp; Bioinformatics Summit Europe]]></title>
  <description><![CDATA[
<p>NGS &amp; Bioinformatics Summit Europe </p>

<p>Conference </p>

<p>7th   to  8th October 2013 <br />Berlin, Germany </p>

<p>Website: https://www.gtcbio.com/conference/ngseurope-overview <br />Contact person: Kristen Starkey </p>

<p>We welcome you to join us at GTC’s NGS &amp; Bioinformatics Summit Europe on October 7-8, 2013 in Berlin, Germany. </p>

<p>Organized by: GTC <br />Deadline for abstracts/proposals: 7th September 2013</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/2631/what-junk-dna-it%E2%80%99s-an-operating-system</guid>
	<pubDate>Mon, 19 Aug 2013 15:24:26 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/2631/what-junk-dna-it%E2%80%99s-an-operating-system</link>
	<title><![CDATA[What Junk DNA? It’s an Operating System]]></title>
	<description><![CDATA[<p>The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as &ldquo;junk DNA,&rdquo; is more than functionless, space-filling material that happens to make up nearly 98% of the genome. The paper adds to a growing body of knowledge establishing a considerable role for this material in the regulation of gene expression and its potential role in human disease.</p><p>Address of the bookmark: <a href="http://www.genengnews.com/keywordsandtools/print/3/32115/" rel="nofollow">http://www.genengnews.com/keywordsandtools/print/3/32115/</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/859/boku-chair-of-bioinformatics</guid>
  <pubDate>Sun, 14 Jul 2013 12:37:23 -0500</pubDate>
  <link></link>
  <title><![CDATA[Boku Chair of Bioinformatics]]></title>
  <description><![CDATA[
<p>The Bioinformatics group at Boku University has two main areas of interest, underpinning a common goal, the study of complex systems in living organisms. To overcome the engineered redundancies and combinatorial effects prevalent in higher eukaryotes, novel views augmenting the classical gene by gene approaches are required. We combine<br />Work to establish improved quantitative experimental assays (such as microarrays or differential in-gel electrophoresis) and<br />Development of modern computational methods (such as hierarchical probabilistic models or integration of heterogeneous data sources)</p>

<p>Link @ http://bioinf.boku.ac.at/</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/3029/bioinformatics-market-in-india</guid>
	<pubDate>Fri, 23 Aug 2013 07:08:49 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/3029/bioinformatics-market-in-india</link>
	<title><![CDATA[Bioinformatics market in India]]></title>
	<description><![CDATA[<div><strong>Key Topics Covered in the Report:</strong></div>
<ul>
<li>The market size of the Indian Bioinformatics Industry , FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market segmentation of India bioinformatics industry by application by sectors, FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market Segmentation of India bioinformatics industry by products and services,FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market Segmentation of India bioinformatics industry by applications of bioinformatics ,FY&rsquo;2007-FY&rsquo;2013</li>
<li>India bioinformatics industry trends and developments</li>
<li>Government regulations and initiatives of India bioinformatics industry</li>
<li>Major bioinformatics research institutes in India</li>
<li>Market Share of leading players in bioinformatics industry in India,FY&rsquo;2013</li>
<li>Company profiles of major players in India bioinformatics industry</li>
<li>Future outlook and projections on the basis of revenue in India bioinformatics market, FY&rsquo;2014-FY&rsquo;2018</li>
</ul>
<p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;(Source: Ken Research)</p><p>Address of the bookmark: <a href="http://www.kenresearch.com/healthcare/biotechnology/india-bioinformatics-industry-research-report/392-91.html" rel="nofollow">http://www.kenresearch.com/healthcare/biotechnology/india-bioinformatics-industry-research-report/392-91.html</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/870/6-phd-students-tu-dresden</guid>
  <pubDate>Sun, 14 Jul 2013 13:42:06 -0500</pubDate>
  <link></link>
  <title><![CDATA[6 PhD Students @ TU Dresden]]></title>
  <description><![CDATA[
<p>At TU Dresden, Faculty of Computer Science, the DFG Research Training Group GRK 1907 “Role-based Software Infrastructures for continuous-context-sensitive Systems” offers the positions of 6 PhD Students (E 13 TV-L)</p>

<p>for applicants interested in performing high-quality research on the connection between software engineering, database systems, and theoretical computer science as well as their applications in bioinformatics and business informatics. The research programme will start on October 1, 2013 until 30.09.2016. The period of employment is governed by the Fixed Term Research Contracts Act (Wissenschaftszeitvertragsgesetz – WissZeitVG).</p>

<p>This research programme is a joint activity of Professors Lehner, Assmann, Baader, Baier, Schill, Schlegel, Schroeder, and Strahringer at TU Dresden. Alongside their research, an individual mentoring and qualification approach are arranged with specialized courses that prepare them optimally for their research, a research seminar where they can meet internationally renowned researchers in the field, and soft skills and language courses.</p>

<p>Requirements: Applicants should have an excellent academic record, and hold a MSc (or an equivalent university degree) in computer science or related disciplines (such as mathematics, bioinformatics or business informatics). Fluency in spoken and written English is required. Applicants with a good knowledge of software engineering or one of the application areas mentioned above are preferred. TU Dresden is committed to increase the proportion of women in research.</p>

<p>Applications from women are particularly welcome. The same applies to disabled people.</p>

<p>Please send enquiries to: wolfgang.lehner@tu-dresden.de</p>

<p>Applications consist of a CV, the names of two referees, transcipts of documents summarizing their academic performance, and a statement of interest. Application by email in pdf format is preferred, and should be submitted to wolfgang.lehner@tu-dresden.de in an electronically signed and encrypted form by July 30, 2013 (stamped arrival date of the university central mail service applies). Alternatively, applications can be sent to: TU Dresden, Fakultät Informatik, Institut für Systemarchitektur, Prof.  Dr.-Ing.  Wolfgang Lehner, 01062 Dresden, Germany.</p>

<p>Shortlisted candidates will be invited to Dresden in the middle of August to give a presentation on their Master’s thesis and discuss their research interest with the participating professors. Candidates that have not yet finished their degree when they send in their application should send preliminary transcripts of their academic records as well as a letter by the thesis adviser that comments on their progress so far and on the expected date of completion of their MSc or equivalent degree.</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4212/eivind-hovigs-lab</guid>
  <pubDate>Tue, 03 Sep 2013 19:06:29 -0500</pubDate>
  <link></link>
  <title><![CDATA[Eivind Hovig's Lab]]></title>
  <description><![CDATA[
<p>Bioinformatics relevant research topics are:</p>

<p>genomic scale studies<br />endogenous mechanisms of mutations, germ line and somatic <br />computational aspects of immunology in cancer <br />signalling networks<br />three-dimensional organization of information in the nucleus<br />gene silencing<br />metastatic cross-talk<br />kinase signaling<br />personalized medicine<br />detection of biomarkers in cancer <br />historical DNA variation</p>

<p>From : http://www.ous-research.no/hovig/</p>

<p>Group address:<br />Eivind Hovig, The Norwegian Radium Hospital, Montebello, 0310 Oslo,Norway<br />Email: ehovig@radium.uio.no</p>
]]></description>
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