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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/34912?offset=180</link>
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	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/poll/view/22920/how-long-have-you-been-a-bioinformatics-scientist-for</guid>
	<pubDate>Tue, 23 Jun 2015 10:55:33 -0500</pubDate>
	<link>https://bioinformaticsonline.com/poll/view/22920/how-long-have-you-been-a-bioinformatics-scientist-for</link>
	<title><![CDATA[How long have you been a bioinformatics scientist for?]]></title>
	<description><![CDATA[<p>Most of the researcher have been a scientist whole life, but infact they actually started paying&nbsp; it with at certain time.So, how long have you been in bioinformatics domain now?</p>]]></description>
	<dc:creator>Jit</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26850/wellcome-trustdbt-india-alliance-margdarshi-fellowships-2016</guid>
  <pubDate>Tue, 29 Mar 2016 17:47:39 -0500</pubDate>
  <link></link>
  <title><![CDATA[Wellcome Trust/DBT India Alliance Margdarshi Fellowships 2016]]></title>
  <description><![CDATA[
<p>The Wellcome Trust/DBT India Alliance invites application for the Margdarshi Fellowship scheme. The scheme provides a unique opportunity for visionary biomedical scientists to lead and nucleate a cutting edge research program in India in collaboration with Indian Host Institution(s). The potential candidates and the Host Institution are encouraged to make a synergistic effort towards establishing a centre of excellence that aims to improve the existing scientific breadth and utilizes the experience of the lead applicant for developing new research platforms. In addition to this, under this programme two eligible Indian institutions may also come together towards creating a new program under the leadership of a visionary scientist.</p>

<p>Eligibility</p>

<p>Interested applicants must</p>

<p>Have around 10 years of experience as independent investigator, and can be of any age or nationality<br />Have Sponsor(s) at not-for-profit Host Institution(s) in India, who is willing to extend the desired commitment and resources for program implementation<br />Provisions</p>

<p>The 5 year Fellowship provides</p>

<p>Generous personal support for the Fellow<br />Salary support for personnel, which may include Assistant Professors<br />Large quantum of funds for equipment, animals and consumables<br />Funds to attend scientific gatherings, for collaborative visits and to organize meetings<br />Overheads for the Host Institution<br />Process</p>

<p>A joint online application is invited from the Applicant and the Sponsor(s). The details of the scheme and the funding mechanism are available on the website at http://wellcomedbt.org/fellowshiptype/margdarshi-fellowships.</p>

<p>Application form can be accessed at https://fellowships.wellcomedbt.org/Login.aspx</p>

<p>Sponsored applications due by 2 May 2016</p>

<p>Send your inquiries to margdarshi@wellcomedbt.org</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/29998/csir-nehru-science-postdoctoral-research-fellowship</guid>
  <pubDate>Tue, 29 Nov 2016 12:34:59 -0600</pubDate>
  <link></link>
  <title><![CDATA[CSIR Nehru Science Postdoctoral Research Fellowship]]></title>
  <description><![CDATA[
<p>CSIR Nehru Science Postdoctoral Research Fellowship</p>

<p>About Fellowship: <br />CSIR Nehru Science Postdoctoral Research Fellowship Scheme is an Research Fellowship awarded/given by HRD Ministry, Govt. of India every year to more than 100 fellows.</p>

<p>It was started to identify promising and young researchers with novel ideas and provide them research opportunities in the areas of basic science, engineering, medicine &amp; agriculture.</p>

<p>The fellowship aims at facilitating their transition from mentored to independent research career.</p>

<p>In addition, check these ICTS Research Fellowships:<br />1.) Max-Planck Partner Group Fellowships 2017-18<br />2.) ICTS-Simons Postdoctoral Fellowships 2017<br />3.) ICTS Post Doctoral Fellowships 2017<br />4.) Airbus Prize Postdoctoral Fellowship 2017-18</p>

<p>Eligibility: To be eligible for this fellowship, you:<br />1.) PhD degree (within 3 years of award of PhD degree), OR<br />2.) Those who have submitted PhD theses.<br />3.) Applicants should have research publications in good impact factor SCI journals.<br />4.) Indian nationals, Persons of Indian Origin (PIO) &amp; Overseas Citizen of India (OCI), a can also apply.<br />5.) Maximum Age Limit: 32 years.</p>

<p>Duration: <br />– 2 Years.<br />– extendable for a maximum of 1 more year based on performance.</p>

<p>Remuneration: <br />– Rs. 50,000/- per month plus House Rent Allowance (HRA)<br />– A contingency grant of Rs. 3.0 lakh per annum.<br />– 25% of the contingency grant can be used for domestic and international travel.</p>

<p>Mode of Selection: You can apply throughout the year, but selection will be made twice a year, in June and December.</p>

<p>How to Apply: <br />– Read the instructions, given at Annexure-I in this PDF file.<br />– And, application form is given as, Annexure-II.<br />– Fill the form &amp; send it to the given address in the PDF file.</p>

<p>Deadline: Rolling Deadline (Applications accepted throughout the year)</p>

<p>Also See: Research Internship/ Fellowship in India:<br />1.) IIT Bombay Research Internship Awards Programme 2016-17<br />2.) IIT Delhi Internship Program 2016-17<br />3.) DAAD WISE – International Internship in Germany<br />4.) Summer Research Fellowship Programme| JNCASR Bangalore<br />5.) Indian Academy of Sciences Summer Internships 2017<br />6.) Winter Internship – IIT Bombay NPDE-TCA<br />7.) Viterbi – India Program 2017 | Research Internship in US<br />8.) Internship – Centre for Stem Cell Research, Vellore</p>

<p>Accommodation &amp; other benefits: <br />– Accommodation may be provided by CSIR, if available.<br />– Medical benefits as per CSIR norms.</p>

<p>For more details: <br />– Check this PDF Notification of Fellowship.<br />– List of CSIR Labs &amp; their work/activities can be seen at www.csir.res.in.</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/32822/phd-positions-in-genova-at-dibris-univ-of-genoa-italy</guid>
  <pubDate>Thu, 18 May 2017 00:04:07 -0500</pubDate>
  <link></link>
  <title><![CDATA[PhD positions in Genova at DIBRIS - Univ. of Genoa, Italy]]></title>
  <description><![CDATA[
<p>PhD positions in Genova at DIBRIS - Univ. of Genoa (Italy)</p>

<p>http://www.disi.unige.it/person/MasulliF/ricerca/PhDinGenova2017.html</p>

<p>The call for some funded positions for  the 3 years PhD studies  at the Department of Informatics, Bioengineering, Robotics and System Engineering (DIBRIS) in Genova is available at</p>

<p>http://www.studenti.unige.it/postlaurea/dottorati/XXXIII/ENG/</p>

<p>The deadline for applications is June13, 2017 and the PhD courses and fellowships should start on Nov 2017.</p>

<p>Details for the application to the  PhD Program in Computer Science and Systems Engineering (CODICE 6608) are at http://phd.dibris.unige.it/csse/index.php/how-to-apply</p>

<p>The research activity of my research group is focused on Computational Intelligence, Machine Learning, Bioinformatics, Systems Biology, and Positive Technology as described at http://www.disi.unige.it/person/MasulliF/ricerca/index.html</p>

<p>The research themes proposed by me and Prof. Stefano Rovetta are:</p>

<p>- Computational Intelligence and Machine Learning (see http://www.disi.unige.it/person/MasulliF/ricerca/Phd2017-T1.html)</p>

<p>- Computational Intelligence and Health and Wellbeing Support( see http://www.disi.unige.it/person/MasulliF/ricerca/Phd2017-T3.html)</p>

<p>You can also propose a different research theme belonging to the research activity of my group.</p>

<p>Looking for self-motivated PhD candidates, interested to the mathematical aspects of their research and to the development of new algorithms for intelligent data analysis, and skilled in programming and   in  thorough experimental data analysis. They will be part of my research group and will collaborate to our research projects and publications.</p>

<p>Italian and international students interested to work are invited  to send their cv  and the name/email-addresses of 3 referees to my email address francesco.masulli@unige.it A.S.A.P.</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/38804/grabb-selective-assembly-of-genomic-regions-a-new-niche-for-genomic-research</guid>
	<pubDate>Sat, 26 Jan 2019 18:58:16 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/38804/grabb-selective-assembly-of-genomic-regions-a-new-niche-for-genomic-research</link>
	<title><![CDATA[GRAbB: Selective Assembly of Genomic Regions, a New Niche for Genomic Research]]></title>
	<description><![CDATA[<p><span>GRAbB is shown to be more efficient than MITObim in terms of speed, memory and disk usage. The other functionalities (handling multiple targets simultaneously and extracting homologous regions) of the new program are not matched by other programs. The program is available with explanatory documentation at&nbsp;</span><a href="https://github.com/b-brankovics/grabb">https://github.com/b-brankovics/grabb</a><span>. GRAbB has been tested on Ubuntu (12.04 and 14.04), Fedora (23), CentOS (7.1.1503) and Mac OS X (10.7). Furthermore, GRAbB is available as a docker repository: brankovics/grabb (</span><a href="https://hub.docker.com/r/brankovics/grabb/">https://hub.docker.com/r/brankovics/grabb/</a><span>).</span></p><p>Address of the bookmark: <a href="https://github.com/b-brankovics/grabb" rel="nofollow">https://github.com/b-brankovics/grabb</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/41905/research-associate-bioinformatics-in-iisc-recruitment-2020</guid>
  <pubDate>Tue, 23 Jun 2020 21:53:34 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics in IISc Recruitment 2020]]></title>
  <description><![CDATA[
<p>Research Associate Bioinformatics in IISc Recruitment 2020</p>

<p>Essential Qualifications: Ph.D. (Bioinformatics/ Biophysics/ Biotechnology or any other stream of biological/ physical sciences) with a minimum of two publications in reputed peer reviewed journals in the area of structural bioinformatics or biophysics or biomolecular modeling/ simulation.</p>

<p>Job description: Development of bioinformatics tools and algorithms/software for structure based analysis of biomolecular systems. Programmatic access to major biomolecular databases using APIs Knowledge based prediction and analysis of biomolecular structure, function and interactions. Docking/simulations for inhibitor design.</p>

<p>Desirable Qualifications (Research Associate/s): i)  Strong computer programming skills (in Python/PERL/PHP or C++ or object oriented database management systems like MySQL etc or scripting languages under LINUX/UNIX environment). </p>

<p>ii) Extensive experience in computational analysis of biomolecular structure/interactions and usage of advanced biomolecular simulation softwares. iii) Adequate knowledge of major databases, webservers and softwares in the area of biomolecular structure/function and drug design. iv)  Familiarity with Parallel Programming environments and experience in usage of high-end HPC clusters.</p>

<p>The candidates must highlight their experience in above mentioned fields/topics in their CV. Initial appointment will be for a period of 1 year, subject to extension after review of performance.</p>

<p>Emoluments: As per DST, GOI norms and commensurate with experience.</p>

<p>More at https://www.iisc.ac.in/positions-open/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43262/bioinformatics-research-scientist-oklahoma-state-university-osu</guid>
  <pubDate>Tue, 17 Aug 2021 13:24:39 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Research Scientist @ Oklahoma State University (OSU)]]></title>
  <description><![CDATA[
<p>This position is an early career research scientist in the area of Bioinformatics to support research projects involving faculty and staff, at Oklahoma State University (OSU). This is a highly technical position that requires a strong research background in biomedical or life sciences, including a high level of expertise with bioinformatics algorithms, databases, and analyses with a focus on next-generation sequence data. Although most of the projects will deal directly with the analysis of DNA and RNA sequence data the individual should be well versed in other types of data sources as well (i.e., microarrays) and handling of large datasets (using data analytics, machine learning, and deep learning techniques). </p>

<p>More at https://okstate.csod.com/ats/careersite/JobDetails.aspx?site=8&amp;id=9874</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44760/the-future-of-bioinformatics-innovations-and-opportunities</guid>
	<pubDate>Mon, 20 Jan 2025 12:44:53 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44760/the-future-of-bioinformatics-innovations-and-opportunities</link>
	<title><![CDATA[The Future of Bioinformatics: Innovations and Opportunities]]></title>
	<description><![CDATA[<p>Bioinformatics, the interdisciplinary field that merges biology, computer science, and statistics, has transformed the way we understand biological systems. As we stand at the cusp of a new era in scientific discovery, the future of bioinformatics promises even greater advancements, powered by cutting-edge technologies and a growing understanding of life&rsquo;s complexities.</p><h4>1. Big Data and Bioinformatics</h4><p>The exponential growth in biological data, driven by advancements in sequencing technologies and high-throughput experiments, has made bioinformatics an indispensable tool. By 2030, we anticipate:</p><ul>
<li>
<p><strong>Petabyte-Scale Data Management</strong>: Enhanced storage solutions and cloud computing platforms will allow researchers to handle the vast amounts of data generated from omics studies, including genomics, transcriptomics, and proteomics.</p>
</li>
<li>
<p><strong>AI and Machine Learning Integration</strong>: Sophisticated algorithms will uncover patterns and relationships in large datasets, enabling predictions about gene function, disease susceptibility, and therapeutic outcomes.</p>
</li>
</ul><h4>2. Personalized Medicine and Genomics</h4><p>Bioinformatics will play a pivotal role in tailoring healthcare to individual patients. Key developments include:</p><ul>
<li>
<p><strong>Whole-Genome Sequencing in Clinics</strong>: The decreasing cost of sequencing will make it routine in medical diagnostics, enabling personalized treatment plans based on an individual&rsquo;s genetic makeup.</p>
</li>
<li>
<p><strong>Drug Repurposing and Development</strong>: Computational tools will identify potential new uses for existing drugs, accelerating the development of targeted therapies.</p>
</li>
</ul><h4>3. Advancing Computational Tools</h4><p>The future will see the development of more user-friendly and powerful bioinformatics tools:</p><ul>
<li>
<p><strong>Graph-Based Approaches</strong>: Enhanced algorithms for analyzing complex biological networks, such as protein-protein interaction maps.</p>
</li>
<li>
<p><strong>Visualization Tools</strong>: Intuitive software for visualizing multi-dimensional data, enabling researchers to interpret findings more effectively.</p>
</li>
</ul><h4>4. Synthetic Biology and Systems Biology</h4><p>Bioinformatics will continue to drive progress in synthetic and systems biology by:</p><ul>
<li>
<p><strong>Gene Circuit Design</strong>: Leveraging computational models to design and simulate synthetic biological systems.</p>
</li>
<li>
<p><strong>Understanding Cellular Pathways</strong>: Integrating multi-omics data to model cellular processes with unprecedented accuracy.</p>
</li>
</ul><h4>5. Bioinformatics in Agriculture and Environmental Science</h4><p>Beyond healthcare, bioinformatics will revolutionize agriculture and environmental conservation:</p><ul>
<li>
<p><strong>Crop Improvement</strong>: Genomic studies will help develop high-yield, disease-resistant, and climate-resilient crops.</p>
</li>
<li>
<p><strong>Microbial Ecology</strong>: Metagenomics will enhance our understanding of microbial communities, aiding in bioremediation and ecosystem management.</p>
</li>
</ul><h4>6. Democratization of Bioinformatics</h4><p>Open-source software and accessible education will broaden participation in bioinformatics research:</p><ul>
<li>
<p><strong>Community-Driven Projects</strong>: Collaborative platforms like GitHub will continue to foster innovation in tool development.</p>
</li>
<li>
<p><strong>Education and Training</strong>: Online courses and workshops will bridge skill gaps, enabling researchers from diverse backgrounds to contribute.</p>
</li>
</ul><h4>Challenges and Ethical Considerations</h4><p>While the future is bright, challenges remain. Data privacy and ethical concerns surrounding genetic information require careful navigation. Furthermore, addressing the digital divide is critical to ensuring equitable access to bioinformatics resources globally.</p><h4>Conclusion</h4><p>The future of bioinformatics is boundless, with opportunities to revolutionize our understanding of life and improve human health. As technologies evolve and collaborations flourish, bioinformatics will undoubtedly remain at the forefront of scientific discovery, unlocking the secrets of life one dataset at a time.</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/40832/biocoder-newsletter-of-that-revolution-it%E2%80%99s-about-biology-as-it-moves-from-research-labs-into-startup-incubators-hacker-spaces-and-even-homes</guid>
	<pubDate>Sun, 02 Feb 2020 07:43:52 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/40832/biocoder-newsletter-of-that-revolution-it%E2%80%99s-about-biology-as-it-moves-from-research-labs-into-startup-incubators-hacker-spaces-and-even-homes</link>
	<title><![CDATA[BioCoder : newsletter of that revolution. It’s about biology as it moves from research labs into startup incubators, hacker spaces, and even homes]]></title>
	<description><![CDATA[<div>
<h3>BioCoder features:</h3>
<ul>
<li>Novel therapeutic discovery strategies</li>
<li>Hardware such as low-cost lab equipment or diagnostics</li>
<li>Open or low&shy;-cost bioinformatics tools</li>
<li>Engineered organisms for the production of small molecules, biologics, or other products</li>
<li>Research projects at a community labspace or projects for science education or public engagement</li>
<li>Hardware or software for lab automation</li>
<li>Citizen science or DIY research projects</li>
<li>Science policy</li>
<li>Tools to increase reproducibility in research, or anything related</li>
</ul>
</div><p>Address of the bookmark: <a href="https://www.oreilly.com/biocoder/" rel="nofollow">https://www.oreilly.com/biocoder/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/42023/encode3-a-collection-of-research-articles-and-related-content-describing-the-encyclopedia-of-dna-elements-its-datasets-and-tools</guid>
	<pubDate>Sat, 08 Aug 2020 08:25:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/42023/encode3-a-collection-of-research-articles-and-related-content-describing-the-encyclopedia-of-dna-elements-its-datasets-and-tools</link>
	<title><![CDATA[ENCODE3: A collection of research articles and related content describing the Encyclopedia of DNA Elements, its datasets and tools.]]></title>
	<description><![CDATA[<p>How cells, tissues and organisms interpret the information encoded in the genome has vital implications for our understanding of development, health and disease. Launched in 2003, the ENCyclopedia Of DNA Elements (ENCODE) project has the aim of mapping the functional elements in the human genome (later expanded to include model organisms).</p><p>During the first phase of ENCODE, published in 2007, microarray-based technologies were used to detect regions associated with transcription factors, certain histone modifications and open chromatin within a pre-specified 1% of the human genome.</p><p>ENCODE&rsquo;s second phase saw a switch to sequencing-based technologies, the addition of new assay types and the analysis of functional elements genome-wide, described in a collection of research articles in 2012.</p><p><span>The&nbsp;</span><a href="https://www.nature.com/articles/s41586-020-2493-4">Encyclopedia paper of ENCODE 3</a><span>, published in&nbsp;</span><em>Nature</em><span>, gives an overview of the various assays that were performed in human and mouse cell lines and tissues and describes a Registry of human and mouse candidate&nbsp;</span><em>cis</em><span>-regulatory elements (cCREs).</span></p><p>More at&nbsp;<a href="https://www.nature.com/immersive/d42859-020-00027-2/index.html">https://www.nature.com/immersive/d42859-020-00027-2/index.html</a></p>]]></description>
	<dc:creator>Shruti Paniwala</dc:creator>
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