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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/35800?offset=50</link>
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	<description><![CDATA[]]></description>
	
	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/17885/international-conference-on-bioinformatics-models-methods-and-algorithms</guid>
	<pubDate>Sun, 05 Oct 2014 11:42:52 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/17885/international-conference-on-bioinformatics-models-methods-and-algorithms</link>
	<title><![CDATA[International Conference on Bioinformatics Models, Methods and Algorithms]]></title>
	<description><![CDATA[<p><span>The purpose of the International Conference on Bioinformatics Models, Methods and Algorithms is to bring together researchers and practitioners interested in the application of computational systems and information technologies to the field of molecular biology, including for example the use of statistics and algorithms to understanding biological processes and systems, with a focus on new developments in genome bioinformatics and computational biology. Areas of interest for this community include sequence analysis, biostatistics, image analysis, scientific data management and data mining, machine learning, pattern recognition, computational evolutionary biology, computational genomics and other related fields.</span></p>
<p><span><span>Position Paper Submission Extension:</span><span>&nbsp;</span><span>October 9, 2014</span><span>&nbsp;</span><br><span>Regular Paper Authors Notification:</span><span>&nbsp;</span><span>November 3, 2014</span><span>&nbsp;</span><br><span>Position Paper Authors Notification:</span><span>&nbsp;</span><span>November 6, 2014</span><span>&nbsp;</span><br><span>Regular and Position Paper Camera Ready and Registration:</span><span>&nbsp;</span><span>November 17, 2014</span><span>&nbsp;</span></span></p><p>Address of the bookmark: <a href="http://www.bioinformatics.biostec.org/" rel="nofollow">http://www.bioinformatics.biostec.org/</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/44400/pevzner-lab</guid>
  <pubDate>Thu, 02 Nov 2023 05:39:26 -0500</pubDate>
  <link></link>
  <title><![CDATA[Pevzner Lab !]]></title>
  <description><![CDATA[
<p>The laboratory works on genome sequencing, immunoproteogenomics, antibiotics sequencing, and comparative genomics - computational technologies that enabled new applications and allowed scientists to attack biological problems that remained beyond the reach of previous techniques.</p>

<p>https://bioalgorithms.ucsd.edu/research4.html</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/41905/research-associate-bioinformatics-in-iisc-recruitment-2020</guid>
  <pubDate>Tue, 23 Jun 2020 21:53:34 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics in IISc Recruitment 2020]]></title>
  <description><![CDATA[
<p>Research Associate Bioinformatics in IISc Recruitment 2020</p>

<p>Essential Qualifications: Ph.D. (Bioinformatics/ Biophysics/ Biotechnology or any other stream of biological/ physical sciences) with a minimum of two publications in reputed peer reviewed journals in the area of structural bioinformatics or biophysics or biomolecular modeling/ simulation.</p>

<p>Job description: Development of bioinformatics tools and algorithms/software for structure based analysis of biomolecular systems. Programmatic access to major biomolecular databases using APIs Knowledge based prediction and analysis of biomolecular structure, function and interactions. Docking/simulations for inhibitor design.</p>

<p>Desirable Qualifications (Research Associate/s): i)  Strong computer programming skills (in Python/PERL/PHP or C++ or object oriented database management systems like MySQL etc or scripting languages under LINUX/UNIX environment). </p>

<p>ii) Extensive experience in computational analysis of biomolecular structure/interactions and usage of advanced biomolecular simulation softwares. iii) Adequate knowledge of major databases, webservers and softwares in the area of biomolecular structure/function and drug design. iv)  Familiarity with Parallel Programming environments and experience in usage of high-end HPC clusters.</p>

<p>The candidates must highlight their experience in above mentioned fields/topics in their CV. Initial appointment will be for a period of 1 year, subject to extension after review of performance.</p>

<p>Emoluments: As per DST, GOI norms and commensurate with experience.</p>

<p>More at https://www.iisc.ac.in/positions-open/</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/3013/python-and-biopython-tutorial</guid>
	<pubDate>Fri, 23 Aug 2013 06:47:40 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/3013/python-and-biopython-tutorial</link>
	<title><![CDATA[Python and BioPython Tutorial]]></title>
	<description><![CDATA[<p>A quickstart tutorial that allows to become familiar with the Python language. The exercises expect knowledge of basic concepts of programming. A group of 2nd year computer science students with no previous Python knowledge required 60'-90' to complete the exercises. With about 3 hours time, the exercise is suitable for non-programmers as well.</p><p>Address of the bookmark: <a href="http://www.biotnet.org/training-materials/python-programmers" rel="nofollow">http://www.biotnet.org/training-materials/python-programmers</a></p>]]></description>
	<dc:creator>Manshi Raghubanshi</dc:creator>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/42499/galaxy-training-resources</guid>
	<pubDate>Sun, 27 Dec 2020 05:28:07 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42499/galaxy-training-resources</link>
	<title><![CDATA[Galaxy Training Resources !]]></title>
	<description><![CDATA[<p>Welcome to Galaxy Training!</p>
<p>Collection of tutorials developed and maintained by the worldwide Galaxy community</p>
<table>
<thead>
<tr><th>Topic</th><th>Tutorials</th></tr>
</thead>
<tbody>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/introduction/">Introduction to Galaxy Analyses</a></td>
<td>10</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/assembly/">Assembly</a></td>
<td>6</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/climate/">Climate</a></td>
<td>3</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/computational-chemistry/">Computational chemistry</a></td>
<td>6</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/ecology/">Ecology</a></td>
<td>6</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/epigenetics/">Epigenetics</a></td>
<td>6</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/genome-annotation/">Genome Annotation</a></td>
<td>3</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/imaging/">Imaging</a></td>
<td>3</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/metabolomics/">Metabolomics</a></td>
<td>4</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/metagenomics/">Metagenomics</a></td>
<td>7</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/proteomics/">Proteomics</a></td>
<td>18</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/sequence-analysis/">Sequence analysis</a></td>
<td>2</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/statistics/">Statistics and machine learning</a></td>
<td>8</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/transcriptomics/">Transcriptomics</a></td>
<td>23</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/variant-analysis/">Variant Analysis</a></td>
<td>8</td>
</tr>
<tr>
<td><a href="https://training.galaxyproject.org/training-material/topics/visualisation/">Visualisation</a></td>
<td>2</td>
</tr>
</tbody>
</table>
<p>&nbsp;</p><p>Address of the bookmark: <a href="https://training.galaxyproject.org/training-material/" rel="nofollow">https://training.galaxyproject.org/training-material/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44002/interesting-bioinformatics-resources</guid>
	<pubDate>Fri, 11 Nov 2022 06:30:46 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44002/interesting-bioinformatics-resources</link>
	<title><![CDATA[Interesting Bioinformatics Resources !]]></title>
	<description><![CDATA[<p>1. a reproducible workflow.&nbsp;<a href="https://www.youtube.com/watch?v=s3JldKoA0zw">https://www.youtube.com/watch?v=s3JldKoA0zw</a>&nbsp;This two minute video will change your mind on reproducible research&nbsp;</p><p>2. Parallel sequencing lives, or what makes large sequencing projects successful&nbsp;<a href="https://academic.oup.com/gigascience/article/6/11/gix100/4557140?login=false">https://academic.oup.com/gigascience/article/6/11/gix100/4557140?login=false</a></p><p>3. Common-sense approaches to sharing tabular data alongside publication&nbsp;<a href="https://www.sciencedirect.com/science/article/pii/S2666389921002300">https://www.sciencedirect.com/science/article/pii/S2666389921002300</a></p><p>4. A Reproducible Data Analysis Workflow with R Markdown, Git, Make, and Docker&nbsp;<a href="https://psyarxiv.com/8xzqy/">https://psyarxiv.com/8xzqy/</a></p><p>5. Practical Computational Reproducibility in the Life Sciences&nbsp;<a href="https://www.cell.com/cell-systems/fulltext/S2405-4712(18)30140-6">https://www.cell.com/cell-systems/fulltext/S2405-4712(18)30140-6</a></p><p>6. A video by Dr.Keith A. Baggerly from MD Anderson [The Importance of Reproducible Research in High-Throughput Biology](<a href="https://www.youtube.com/watch?v=7gYIs7uYbMo">https://www.youtube.com/watch?v=7gYIs7uYbMo</a>) highly recommended.</p><p>7. Ten Simple Rules for Reproducible Computational Research&nbsp;<a href="http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1003285">http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1003285</a>)</p><p>8. Good Enough Practices in Scientific Computing&nbsp;<a href="http://arxiv.org/abs/1609.00037">http://arxiv.org/abs/1609.00037</a>&nbsp;</p><p>9. Best Practices for Scientific Computing&nbsp;<a href="https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1001745">https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1001745</a></p><p>10. A Quick Guide to Organizing Computational Biology Projects&nbsp;<a href="http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.100042">http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.100042</a>&nbsp; A must read for computational biologists!</p><p>11. Reproducibility of computational workflows is automated using continuous analysis&nbsp;<a href="https://www.nature.com/articles/nbt.3780">https://www.nature.com/articles/nbt.3780</a></p><p>12. Five selfish reasons to work reproducibly&nbsp;<a href="https://genomebiology.biomedcentral.com/articles/10.1186/s13059-015-0850-7">https://genomebiology.biomedcentral.com/articles/10.1186/s13059-015-0850-7</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/18380/jrfsrf-at-university-of-hyderabad</guid>
  <pubDate>Fri, 17 Oct 2014 01:55:44 -0500</pubDate>
  <link></link>
  <title><![CDATA[JRF/SRF at University of Hyderabad]]></title>
  <description><![CDATA[
<p>Applications are invited for the following post of Junior Research Fellow (temporary position coterminous with the project) under DBT funded research project on ““Understanding the functions of α1β1γ1/α2β1γ1 selective AMPK Modulators in dissecting the pharmacological role of these isozymes in metabolic diseases”</p>

<p>Qualified and interested candidates can send their curriculum vitae by e-mail to hr@drils.org on or before 27th October 2014 mention in the subject line of the mail the following code: AMPK-Biology.</p>

<p>Selected candidates will be called for a personal interview to Dr. Reddy’s Institute of Life Sciences, University of Hyderabad Campus, Gachibowli, Hyderabad. The selected candidate is expected to report within two weeks from the date of selection to start work on the project.</p>

<p>Junior Research Fellowship (Molecular Modeling/Biology) for two years and Senior Research fellowship for one year</p>

<p>Junior Research Fellowship: Rs. 15,600/- (consolidated) per month for first two years.<br />Senior Research Fellowship: Rs. 18,200/-(consolidated) per month for the 3rd year.</p>

<p>Duration: The duration of the fellowship is for three years. However, the performance of the candidate will be reviewed after the completion of every year and the fellowship will be renewed only upon satisfactory performance.</p>

<p>Responsibilities:</p>

<p>1) Literature search.<br />2) Design, plan and execute experiments under the supervision of the scientist.<br />3) Provide scientific support to the scientist in his/her research activities.<br />4) Book keeping and maintenance of stocks and consumables.</p>

<p>Essential Qualifications:</p>

<p>Required: M.Sc. in Microbiology/Biotechnology/Bioinformatics or any other related branch of basic Sciences from a recognized university/institute with a consistent academic record of minimum 60% aggregate in all qualifying examinations. The candidate should be NET qualified for lectureship. The candidate should be motivated to work with dedication.</p>

<p>Desirable: expertise/experience in both Molecular Modeling and Molecular Biology.</p>

<p>Experience: 0-2 years in the areas of Molecular Modeling and/or Molecular Biology and cell biology and Biochemistry.</p>

<p>Preferable: Relevant research experience as evident from thesis/dissertation/project work.</p>

<p>Advertisement: http://www.ilsresearch.org/userfiles/Junior%20REsearch%20Fellowship%20-%20AMPK(Biology).pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/18385/biinformamatics-lead-at-google-life-sciences</guid>
  <pubDate>Fri, 17 Oct 2014 02:24:55 -0500</pubDate>
  <link></link>
  <title><![CDATA[Biinformamatics Lead at Google Life Sciences]]></title>
  <description><![CDATA[
<p>Google Life Sciences is recruiting a technical lead with experience in bioinformatics and clinical bioinformatics, including for biomarker discovery projects such as the Baseline study.</p>

<p>Responsibilities</p>

<p>Lead teams of scientists in structuring, prototyping, and executing large-scale bioinformatic and other analysis.<br />Develop novel bioinformatics, statistical, data processing, pathway, data mining and other algorithms to identify biological signals and their clinical correlates in broad kinds of individual and population data.<br />Develop novel platform-level analytical tools for sequence-based assays (assembly, annotation, variant calling and interpretation, phasing, genome structure, etc.), expression assays (RNAseq and microarray), proteomics, and metabolomics.<br />Develop statistical models that robustly correlate complex laboratory-derived information with phenotypic and clinical information.<br />Create scientifically rigorous visualizations, communications, and presentations of results.</p>

<p>Reference @ https://www.google.com/about/careers/search#!t=jo&amp;jid=62095001</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/18580/faculty-positions-at-central-university-of-punjab-bathinda</guid>
  <pubDate>Wed, 22 Oct 2014 10:45:37 -0500</pubDate>
  <link></link>
  <title><![CDATA[Faculty Positions at CENTRAL UNIVERSITY OF PUNJAB, BATHINDA]]></title>
  <description><![CDATA[
<p>Advertisement No. T/NT-01 (2014)</p>

<p>Faculty Positions<br />The Central University of Punjab (CUP), Bathinda will be having the Schools and Departments as given in Table-I. The University invites applications from eligible candidates for the posts of Professors (Pay Band Rs. 37400-67000 with AGP of Rs. 10, 000/-), Associate Professors (Pay Band Rs.37400-67000 with AGP of Rs. 9,000/-) and Assistant Professors (Pay Band Rs.15600-39100 with AGP of Rs. 6,000/-)</p>

<p>POSITION AVAILABLE IN THE AREA OF SPECIALIZTION</p>

<p>3. Bioinformatics,</p>

<p>Procedure to apply: Application forms along with API form complete in all respect along with necessary documents and application fee of Rs. 750/-. (Rs. 250/- for Scheduled Caste/Scheduled Tribe/Person with disabilities) should be sent to:</p>

<p>Registrar (Officiating)<br />Central University of Punjab<br />City Campus, Mansa Road<br />Bathinda-151 001</p>

<p>Application forms from the prospective candidates are accepted upto November 10, 2014.</p>

<p>Based on the qualification of the candidates and the need of the university, the applications received will be processed through appropriately constituted selection committees shortly. Minimum qualification can be relaxed in case of exceptionally outstanding candidate. For further details visit www.cup.ac.in; www.centralunipunjab.com; www.cup.edu.in</p>

<p>The candidate should download the application form available at website www.cup.ac.in;<br />www.centralunipunjab.com; and submit it complete in all respects on or before 10th November 2014.</p>

<p>Those who have applied earlier need to submit Academic Performance Index (API) form, 5 copies of Summary of the Application Form (available at: www.cup.ac.in; www.centralunipunjab.com and Updated CV if not updated recently (without application fee).</p>

<p>http://cup.edu.in/Faculty_details_and_general_instructions.pdf</p>

<p>http://cup.edu.in/Final%20Application%20and%20summary%20Sheet%20and%20Api%20form.pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/19020/jrf-in-bioinformatics-bioinformatics-centre-north-eastern-hill-university</guid>
  <pubDate>Thu, 06 Nov 2014 10:24:05 -0600</pubDate>
  <link></link>
  <title><![CDATA[JRF in Bioinformatics @ Bioinformatics Centre, North-Eastern Hill University]]></title>
  <description><![CDATA[
<p>Applications with complete bio-data are invited for JRF (3) and Project Assistant (1) in a DBT project "Next Generation Sequencing (NGS)-based de novo assembly of expressed transcripts and genome information of Orchids in North-East India" sanctioned for a period of 3 years.</p>

<p>Details are available at www.nehu.ac.in and www.bicnehu.ac.in.</p>

<p>Applications must reach the undersigned within 15 days from the date of publication of this advertisement.</p>

<p>Prof. Pramod Tandon. PI/Mr. Devendra Kumar Biswal (Co-PI)</p>
]]></description>
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