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pbalign: maps PacBio reads to reference sequences and saves alignments to a BAM file
By Jit 2375 days agogithub.com - pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file...AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
By Jit 2300 days agowww.healthcare.uiowa.edu - Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and rarefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser...Platypus: A Haplotype-Based Variant Caller For Next Generation Sequence Data
By Shruti Paniwala 2221 days agowww.well.ox.ac.uk - Platypus is a tool designed for efficient and accurate variant-detection in high-throughput sequencing data. By using local realignment of reads and local assembly it achieves both high sensitivity and high specificity. Platypus can detect...Introduction to Bioinformatics
By eliabrodsky 1998 days agoLearn about bioinformatics online by watching videos, reading engaging articles and practicing bioinformatics skills using public domain datasets.
Industrial Training in Computer Aided Drug Designing (CADD)
Last updated 1837 days ago by JitLearn More about Computer Aided Drug Designing (CADD)!!! #rasalsi #rasa In our Industrial program you will get Knowledge on RNA Seq, CHIP Seq, Batch Starts From 18th November 2019 #hurryup #registernow #enquirenow The primary goal of the...Scientist Bioinformatics Positions
Bioinformatics-Multi_Omics_Integration https://www.researchgate.net/job/939073_Senior_Scientist_Bioinformatics-Multi_Omics_Integration Senior_Scientist_Bioinformatics-Transcriptomics_Analysis...Parliament2: Runs a combination of tools to generate structural variant calls on whole-genome...
By Jit 1640 days agogithub.com - Parliament2 identifies structural variants in a given sample relative to a reference genome. These structural variants cover large deletion events that are called as Deletions of a region, Insertions of a sequence into a region, Duplications of a...Project Associate-I | Project Associate-II | Senior Project Associate @ IGIB
Experience in Next Generation Sequencing (NGS) application and interest in Genomics/ Clinical / Translational Applications. OR Good computational programming skills and deep interest in working on interface of Genomics and Clinical application....
