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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/37610?offset=1320</link>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/45226/professor-of-bioinformatics</guid>
  <pubDate>Sat, 15 Aug 2026 12:39:03 -0500</pubDate>
  <link></link>
  <title><![CDATA[Professor of Bioinformatics]]></title>
  <description><![CDATA[
<p>The Department of Statistics are seeking to recruit a Professor of Bioinformatics. The professorship will be held alongside a Fellowship at University College.</p>

<p>The Department is at the forefront of developments in machine learning, data science, and computational methods for understanding complex biological systems, integrating these approaches into both its research and teaching. This role offers significant scope to shape the future of bioinformatics and quantitative biology at Oxford and beyond.</p>

<p>You will be expected to develop and lead a world-class research programme in bioinformatics, helping to strengthen Oxford's position in areas such as statistical genomics, computational biology, machine learning for biological data, engineering biology, systems biology, and biomedical data science. We value the breadth of approaches that contribute to modern bioinformatics. Whatever your particular focus, you will understand how quantitative and computational methods can be applied to important biological and biomedical questions, and how collaboration across disciplines can generate new insights and opportunities. Alongside your own research, you will support the development of doctoral students, postdoctoral researchers, and early-career academics. You will contribute to our teaching at undergraduate and postgraduate level, delivering lectures, supervising student projects, and supporting graduate research students.</p>

<p>We are looking for someone who combines scholarly distinction with a collaborative and ambitious approach to research. You will be a researcher with an international reputation in bioinformatics, with a strong record of producing influential research at the interface of statistics, computational biology, genomics, and data science, and of securing research funding. Your work should advance the field, whether through methodological innovation, biological discovery, or the development of new approaches to understanding complex biological and biomedical data. You will bring experience of shaping research strategy, building productive collaborations, and exercising academic leadership. Above all, we wish to appoint someone who shares our values of intellectual curiosity, academic excellence, scholarly integrity, and a commitment to fostering a positive, supportive, and inclusive environment for all.</p>

<p>If you would like to discuss this post, please contact the Head of the Department of Statistics, Professor Frank Windmeijer, frank.windmeijer@stats.ox.ac.uk, or for information about University College please contact the Senior Tutor, Dr Andrew Bell, andrew.bell@univ.ox.ac.uk. All enquiries will be treated in strict confidence and will not form part of the selection decision.</p>

<p>The closing date for applications is 12:00 noon UK time on Monday 21 September 2026. Interviews are expected to be held in November 2026.</p>

<p>Apply here https://my.corehr.com/pls/uoxrecruit/erq_jobspec_version_4.display_form</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/7153/phd-student-in-computational-systems-biology</guid>
  <pubDate>Tue, 10 Dec 2013 18:46:05 -0600</pubDate>
  <link></link>
  <title><![CDATA[Ph.D. student in Computational Systems Biology]]></title>
  <description><![CDATA[
<p>Ph.D. student in Computational Systems Biology</p>

<p>Location : The Luxembourg Centre for Systems Biomedicine (LCSB) at the University of Luxembourg, Luxembourg, Luxembourg<br />Deadline for applications : unknown.<br />Description :</p>

<p>The Luxembourg Centre for Systems Biomedicine (LCSB) was created within the Health Technologies Initiative from the Government of Luxembourg as one of the research priorities of the University of Luxembourg. The LCSB is an Interdisciplinary Centre of the University that combines experimental and computational approaches to analyse complex biological systems and disease processes. The Computational Biology Group (CBG) provides the LCSB with a solid infrastructure in developing theoretical framework for computational modeling on biomedical problems, especially in the area of network biology in the context of cellular programming/reprogramming. The CBG group includes researchers with theoretical, computational and wet lab backgrounds, thereby providing an unusually interdisciplinary environment.<br />The Computational Biology Group seeks a highly-skilled Ph.D. student to work on an exciting project on reconstruction and analysis of an integrated gene regulatory network model to elucidate key mechanisms of cellular reprogramming. The model will rely on the integration and mining of diverse transcriptomics and epigenomics data of different cell types from the Central Nervous System. The Ph.D. student is expected to collaborate with other members of the CBG to develop a computational methodology aiming at designing, in-silico, cellular reprogramming events, with a focus on the nervous system. This project will be carried out in collaboration with Prof. Noel Buckleys lab at Kings College London.<br />Requirements of the ideal candidate:<br />Master degree in Bioinformatics, Computer Science, Biology or a related discipline<br />Prior experience in mathematical modelling of biological networks, especially in network inference and analysis<br />Excellent working knowledge in English.<br />.<br />We offer:<br />Full contract for Ph.D. student for three years with possibility of renewal<br />Opportunity to do applied research to medical problems within a highly dynamic research institution (LCSB) and in collaboration with internationally recognized partners<br />An exciting international environment<br />A very competitive salary</p>

<p>For further information, please contact:</p>

<p>Prof. Dr. Antonio del Sol<br />E-mail: antonio.delsol@uni.lu</p>

<p>Applications should contain the following documents:<br />A detailed curriculum vitae<br />cover letter mentioning the reference number<br />description of past research experience and future interests<br />name and addresses of three referees</p>

<p>All applications should be sent preferably in electronic version until December 31st, 2013 to the following address:</p>

<p>Luxembourg Centre for Systems Biomedicine (LCSB)<br />University of Luxembourg<br />7, avenue des Hauts-Fourneaux<br />L-4362 Esch-sur-Alzette<br />Tel: +352-466644-6982 (Office)<br />Email: antonio.delsol@uni.lu<br />http://www.lcsb.lu</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/45337/yeaman-lab</guid>
  <pubDate>Wed, 16 Sep 2026 04:01:26 -0500</pubDate>
  <link></link>
  <title><![CDATA[Yeaman Lab]]></title>
  <description><![CDATA[
<p>The natural world is a diverse place. To contend with highly variable environments, organisms have evolved a wide range of traits and behaviours as adaptations to their environment. From armour plating in stickleback to trade-offs between growth rate and cold tolerance in lodgepole pine, organisms have found many different genetic solutions to the challenge of existing in their environment. In my lab, we study a range of questions asking how such complex adaptations evolve: <br />How is the genetic basis of local adaptation shaped by the interplay between natural selection and dispersal?<br />Does the architecture of genome evolve to facilitate further adaptation?<br />How can we use genomic technologies and bioinformatics to study adaptation?<br />How do organisms adapt to rapidly changing environments?</p>

<p>To attempt to answer these questions about the basics of how evolution works, we use a combination of computational biology, analytical theory, comparative genomics.</p>

<p>More at https://yeamanlab.weebly.com</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/6836/research-fellow-mendel-laboratory</guid>
  <pubDate>Tue, 26 Nov 2013 00:07:57 -0600</pubDate>
  <link></link>
  <title><![CDATA[Research Fellow @ Mendel laboratory]]></title>
  <description><![CDATA[
<p>IRCCS Casa Sollievo della Sofferenza – Mendel laboratory is seeking one talented bioinformatician (Rome)<br />Start date: immediate</p>

<p>Duration: 1 year</p>

<p>Funding Source: Institutional<br />Salary on grant: B2 (€ 22.000/year gross)<br />Contact Person (Referent): Tommaso Mazza<br />Ref. E-Mail: t.mazza@css-mendel.it<br />Tel: +39 06 44160526<br />Fax: +39 06 44160548</p>

<p>Job Description: The bioinformatics unit at IRCCS Casa Sollievo della Sofferenza - Mendel laboratory in Rome is looking for one young PhD bioinformatician with specific experience and/or interest in the analysis of transcriptomic data.</p>

<p>The candidate will be mainly in charge of developing research on a range of hot applications and projects, dealing with microarrays, RNA-Seq and miRNA-Seq data. Main activities will be: (i) data analysis (short-reads mapping, variants call and annotation, functional enrichment analysis of gene expression data); (ii) networks analysis and simulation (artificial knockout, redundancy and lethality analysis, gene set essentiality); (iii) developing of ad-hoc software solutions/routines on clusters of CPUs and GPUs.</p>

<p>The correct cultural background (training in Biology / Computer Science / Statistics or a mix of the three) and a strong interest in working with high throughput data analysis will be considered at the same level of specific experience in the above-mentioned fields.<br />Knowledge of molecular modeling and simulation and one of these languages: python, perl, R, Java, C++, C# is a golden plus. Good knowledge of Scientific English will be positively evaluated for this position, together with good presentation and teamwork skills.</p>

<p>A CV with one professional reference, details on educational background and of the biological and/or bioinformatic and/or data analysis skills and experience should be sent by email for a preliminary selection to: Tommaso Mazza, CSS-Mendel: t.mazza@css-mendel.it</p>

<p>Context<br />Casa Sollievo della Sofferenza is an Institute for hospitalization, care, and scientific research located in San Giovanni Rotondo, Italy. It integrates clinical assistance (with inpatient and outpatient facilities) and research. It has an affiliate institute, CSS-Mendel, located in Rome. Between the two sites, it employs over 100 researchers who focus on genetics. The Center is equipped with state of the art genomics technology (SOLiD 5500XL next generation sequencer, Illumina MiSeq, Affymetrix/Agilent microarray platforms, etc) as well as a dedicated high performance computing facility, a non-conventional workstation of GPUs and a short- and long-term storage disk.</p>

<p>Applications<br />Candidates should send:<br />• a cover letter explaining the role they would like to undertake within the Center, even if it is not listed in this job adv, stating clearly why they would be a good fit to the proposed role, and what they would bring to the Center in terms of expertise, ideas, talent;<br />• a CV including a list of publications;<br />• List of referees;</p>

<p>More at http://www.css-mendel.it/</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/fun/view/4196/chemical-elements-of-bioinformatics</guid>
	<pubDate>Tue, 03 Sep 2013 16:35:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/fun/view/4196/chemical-elements-of-bioinformatics</link>
	<title><![CDATA[Chemical Elements of Bioinformatics]]></title>
	<description><![CDATA[<p>You must be familiar with periodic table and colour pattern, but this time you are going to amaze by new elements table by Eagle genomics. Just check it out and have fun :)</p><p><a href="http://elements.eaglegenomics.com/">http://elements.eaglegenomics.com/</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/7212/bioinformatics-group-at-boku-university</guid>
  <pubDate>Thu, 12 Dec 2013 17:53:10 -0600</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics group at Boku University]]></title>
  <description><![CDATA[
<p>The Bioinformatics group at Boku University has two main areas of interest, underpinning a common goal, the study of complex systems in living organisms. To overcome the engineered redundancies and combinatorial effects prevalent in higher eukaryotes, novel views augmenting the classical gene by gene approaches are required. We combine</p>

<p>1. Work to establish improved quantitative experimental assays (such as microarrays or differential in-gel electrophoresis) and<br />2. Development of modern computational methods (such as hierarchical probabilistic models or integration of heterogeneous data sources)</p>

<p>Lab page @ http://bioinf.boku.ac.at/</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/3889/bioinformatics-and-sequencing-courses-and-workshops</guid>
	<pubDate>Sat, 24 Aug 2013 16:41:26 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/3889/bioinformatics-and-sequencing-courses-and-workshops</link>
	<title><![CDATA[Bioinformatics and Sequencing Courses and Workshops]]></title>
	<description><![CDATA[<p>Swiss Institute of Bioinformatics (SIB) organises lots of bioinformatics courses covering wide range of topics:</p><p><a href="http://www.isb-sib.ch/education/training-courses.html">http://www.isb-sib.ch/education/training-courses.html</a></p><p>Canadian bioinformatics also organises various bioinformatics and sequencing courses:</p><p><a href="http://bioinformatics.ca/workshops">http://bioinformatics.ca/workshops</a></p><p>In addition to above two, EMBI&nbsp;Europe, EMBO Europe, Cold Spring Harbour USA, Wellcome Trust UK and NOVA&nbsp;Europe&nbsp;also organise bioinformatics and sequencing courses annually:</p><p><a href="http://www.embl.de/training/events/index.php?p_outstation=ALL">http://www.embl.de/training/events/index.php?p_outstation=ALL</a></p><p><a href="http://www.embo.org/funding-awards/courses-workshops">http://www.embo.org/funding-awards/courses-workshops</a></p><p><a href="http://meetings.cshl.edu/courses.html">http://meetings.cshl.edu/courses.html</a></p><p><a href="http://www.wellcome.ac.uk/Education-resources/Courses-and-conferences/Advanced-Courses-and-Scientific-Conferences/Advanced-Courses/index.htm">http://www.wellcome.ac.uk/Education-resources/Courses-and-conferences/Advanced-Courses-and-Scientific-Conferences/Advanced-Courses/index.htm</a></p><p><a href="http://www.nova-university.org/pagetop.cfm?MenySidorTop_id=2&amp;open=7">http://www.nova-university.org/pagetop.cfm?MenySidorTop_id=2&amp;open=7</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/7216/free-math-books</guid>
	<pubDate>Thu, 12 Dec 2013 19:38:34 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/7216/free-math-books</link>
	<title><![CDATA[Free math books]]></title>
	<description><![CDATA[<p>Bioinformatics require some match skills, therefore I decided to provide this wonderful math eBooks links to the BOL community.</p>
<p>Please add ur links/bookmarks in comment section.</p><p>Address of the bookmark: <a href="http://physicsdatabase.com/free-math-books/" rel="nofollow">http://physicsdatabase.com/free-math-books/</a></p>]]></description>
	<dc:creator>Manisha Mishra</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4210/uni-computing-bergen-norway</guid>
  <pubDate>Tue, 03 Sep 2013 18:40:50 -0500</pubDate>
  <link></link>
  <title><![CDATA[Uni Computing Bergen Norway]]></title>
  <description><![CDATA[
<p>Info on Uni Computing (Webpage: http://www.bccs.uni.no/) :</p>

<p>Uni Computing (formerly Uni BCCS) is a department of Uni Research, affiliated with the University of Bergen.</p>

<p>5 groups in this lab works on computational resources, methods, algorithms, and software.</p>

<p>Following two bioinformatics groups are:</p>

<p>The Computational Biology Unit (CBU) provides education and research in bioinformatics focused on functional genomics.</p>

<p>The Computational Ecology Unit (CEU) is basically deal with population fluctuations, behavioural patterns and the ways life cycles emerge.</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/7387/bioinformatics-software-for-biologists-in-the-genomics-era</guid>
	<pubDate>Sun, 22 Dec 2013 17:31:05 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/7387/bioinformatics-software-for-biologists-in-the-genomics-era</link>
	<title><![CDATA[Bioinformatics software for biologists in the genomics era]]></title>
	<description><![CDATA[<p>The genome sequencing revolution is approaching a landmark figure of 1000 completely sequenced genomes. Coupled with fast-declining, per-base sequencing costs, this influx of DNA sequence data has encouraged laboratory scientists to engage large datasets in comparative sequence analyses for making evolutionary, functional and translational inferences. However, the majority of the scientists at the forefront of experimental research are not bioinformaticians, so a gap exists between the user-friendly software needed and the scripting/programming infrastructure often employed for the analysis of large numbers of genes, long genomic segments and groups of sequences. We see an urgent need for the expansion of the fundamental paradigms under which biologist-friendly software tools are designed and developed to fulfill the needs of biologists to analyze large datasets by using sophisticated computational methods. We argue that the design principles need to be sensitive to the reality that comparatively small teams of biologists have historically developed some of the most popular biological software packages in molecular evolutionary analysis. Furthermore, biological intuitiveness and investigator empowerment need to take precedence over the current supposition that biologists should re-tool and become programmers when analyzing genome scale datasets.</p><p>Address of the bookmark: <a href="http://bioinformatics.oxfordjournals.org/content/23/14/1713.full" rel="nofollow">http://bioinformatics.oxfordjournals.org/content/23/14/1713.full</a></p>]]></description>
	<dc:creator>Poonam Mahapatra</dc:creator>
</item>

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