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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/38642?</link>
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	<description><![CDATA[]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27463/bpipe-a-tool-for-running-and-managing-bioinformatics-pipelines</guid>
	<pubDate>Sat, 21 May 2016 22:42:16 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27463/bpipe-a-tool-for-running-and-managing-bioinformatics-pipelines</link>
	<title><![CDATA[Bpipe - a tool for running and managing bioinformatics pipelines]]></title>
	<description><![CDATA[<p>Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing stages - known as 'pipelines'.</p>
<ul>
<li>January 20th, 2016 - New! Bpipe 0.9.9 released!</li>
<li>Download <a href="http://download.bpipe.org/versions/bpipe-0.9.9.tar.gz">latest</a>, <a href="http://download.bpipe.org">all</a></li>
<li><a href="http://docs.bpipe.org">Documentation</a></li>
<li><a href="https://groups.google.com/forum/#%21forum/bpipe-discuss">Mailing List</a> (Google Group)</li>
</ul>
<p>Bpipe has been published in <a href="http://bioinformatics.oxfordjournals.org/content/early/2012/04/11/bioinformatics.bts167.abstract">Bioinformatics</a>! If you use Bpipe, please cite:</p>
<p><em>Sadedin S, Pope B &amp; Oshlack A, Bpipe: A Tool for Running and Managing Bioinformatics Pipelines, Bioinformatics</em></p><p>Address of the bookmark: <a href="http://docs.bpipe.org/" rel="nofollow">http://docs.bpipe.org/</a></p>]]></description>
	<dc:creator>Radha Agarkar</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43292/bioinformatics-scientist-production-bioinformatics-south-san-francisco-ca</guid>
  <pubDate>Thu, 19 Aug 2021 08:45:24 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Scientist, Production Bioinformatics @ South San Francisco, CA]]></title>
  <description><![CDATA[
<p>wist is looking for a Bioinformatics Scientist to join our Production Bioinformatics Team. You will work alongside research scientists, software engineers and data scientists to further deliver on our mission to expand access to best-in-class synthetic biology and next-generation sequencing applications. You will be developing and engineering tools to better evaluate and build hardened, production quality pipelines, optimize data quality, and automate lab and bioinformatics processes. Our ideal candidate is an organized problem solver with a background in developing and building novel production-quality bioinformatics tools and packages. Equally excellent communication skills and a proven ability to work independently are required.</p>

<p>More at https://boards.greenhouse.io/twistbioscience/jobs/3135495?gh_src=9ecc0b941us</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/39606/amity-university-bioinformatics-summer-program-kolkata</guid>
	<pubDate>Tue, 11 Jun 2019 21:27:10 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/39606/amity-university-bioinformatics-summer-program-kolkata</link>
	<title><![CDATA[Amity University Bioinformatics Summer Program - Kolkata]]></title>
	<description><![CDATA[<p>Registrations are now open for the 2019 Summer Bioinformatics Training program at Amity University, Kolkata. The program will focus on introductory topics for life science students. We will review important history, topics and challenges bioinformatics can help address in the context of basic research, discovery and industry.</p><p>Read more: https://edu.t-bio.info/amity-university-summer-bioinformatics-program-registrations-are-open/</p>]]></description>
	<dc:creator>eliabrodsky</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/37317/interview-puzzles-for-bioinformatician</guid>
	<pubDate>Tue, 17 Jul 2018 05:26:18 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/37317/interview-puzzles-for-bioinformatician</link>
	<title><![CDATA[Interview Puzzles for Bioinformatician !]]></title>
	<description><![CDATA[<p>These are some of the most famous Interview Puzzles being asked in top tech companies.<br /><br />Here is a list of Top 25 puzzles which have been asked in top Tech Interview.</p><ol>
<li><span><a href="http://puzzlefry.com/puzzles/2-eggs-and-100-floor-google-classic-question/" target="_blank">2 Eggs and 100 Floor Classic Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/gold-coins-puzzle/" target="_blank">Five pirates and gold coin Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/gold-puzzle/" target="_blank">Six pirates and Gold Coin puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/probability-of-having-boy/" target="_blank">Probability of having boy</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/random-airplane-seats/" target="_blank">Random Airplane Seats</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/inverted-cards-puzzle/" target="_blank">Inverted playing card puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/flipping-coins/" target="_blank">Flipping Coins Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/three-hat-colors/" target="_blank">Three hat colors Microsoft Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/25-horses-5-tracks-puzzle/" target="_blank">25 horses 5 tracks Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/gold-bar-puzzle-2/" target="_blank">Gold Bar Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/crossing-the-bridge-puzzle/" target="_blank">Crossing the Bridge Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/interview-questions/" target="_blank">Will you accept the bet?</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/the-line-of-persons-with-hats/" target="_blank">The Puzzle of 100 Hats</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/how-many-days/" target="_blank">Man fell in Well Puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/minimum-number-of-weigths/" target="_blank">Minimum Number of Weigths</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/one-bulb-with-3-switches/" target="_blank">One Bulb with 3 Switches</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/find-the-minimum-number-of-aircraft/" target="_blank">Find the minimum number of aircraft</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/burning-ropes-to-measure-time/" target="_blank">Burning ropes to measure time</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/connect-3-houses-with-3-wells/" target="_blank">Connect 3 houses with 3 wells</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/measure-9-minutes-from-2-hourglasses-puzzle/" target="_blank">Measure 9 minutes from 2 hourglasses puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/ant-and-triangle-problem/" target="_blank">Ant and Triangle Problem</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/the-man-in-the-elevator/" target="_blank">The Man in the Elevator</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/find-the-survivor/" target="_blank">Find the survivor</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/free-the-prisoners-puzzle/" target="_blank">Free the prisoners puzzle</a></span></li>
<li><span><a href="http://puzzlefry.com/puzzles/great-strategy-can-only-save-life/" target="_blank">GREAT STRATEGY CAN ONLY SAVE LIFE</a></span></li>
</ol><p><br /><span>Specially for Microsoft Interview Puzzles, you may refer,</span><br /><span><a href="http://puzzlefry.com/2015/08/top-15-famous-microsoft-interview-puzzles/" target="_blank">Top 15 Microsoft Interview Puzzles</a></span><br /><span><a href="http://puzzlefry.com/qa-tag/microsoft-interview-puzzles/" target="_blank">Microsoft Interview Puzzles</a></span><br /><br /><span>Other MOST COMMON Interview Puzzles-</span><br /><span><a href="http://puzzlefry.com/2015/08/top-25-tech-interview-puzzles-with-answers/" target="_blank">Top 25 Tech Interview&nbsp;</a></span><span><a href="http://puzzlefry.com/2015/08/top-25-tech-interview-puzzles-with-answers/" target="_blank">Logical Puzzles</a></span><br /><br /><span>Each of the puzzles got repeated a number of times in interviews&nbsp;</span><span>even for top tech companies&nbsp;</span></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/41905/research-associate-bioinformatics-in-iisc-recruitment-2020</guid>
  <pubDate>Tue, 23 Jun 2020 21:53:34 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics in IISc Recruitment 2020]]></title>
  <description><![CDATA[
<p>Research Associate Bioinformatics in IISc Recruitment 2020</p>

<p>Essential Qualifications: Ph.D. (Bioinformatics/ Biophysics/ Biotechnology or any other stream of biological/ physical sciences) with a minimum of two publications in reputed peer reviewed journals in the area of structural bioinformatics or biophysics or biomolecular modeling/ simulation.</p>

<p>Job description: Development of bioinformatics tools and algorithms/software for structure based analysis of biomolecular systems. Programmatic access to major biomolecular databases using APIs Knowledge based prediction and analysis of biomolecular structure, function and interactions. Docking/simulations for inhibitor design.</p>

<p>Desirable Qualifications (Research Associate/s): i)  Strong computer programming skills (in Python/PERL/PHP or C++ or object oriented database management systems like MySQL etc or scripting languages under LINUX/UNIX environment). </p>

<p>ii) Extensive experience in computational analysis of biomolecular structure/interactions and usage of advanced biomolecular simulation softwares. iii) Adequate knowledge of major databases, webservers and softwares in the area of biomolecular structure/function and drug design. iv)  Familiarity with Parallel Programming environments and experience in usage of high-end HPC clusters.</p>

<p>The candidates must highlight their experience in above mentioned fields/topics in their CV. Initial appointment will be for a period of 1 year, subject to extension after review of performance.</p>

<p>Emoluments: As per DST, GOI norms and commensurate with experience.</p>

<p>More at https://www.iisc.ac.in/positions-open/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43272/bioinformatics-head-bioinformatics-manager-iii-cancer-genomics-research-laboratory-at-frederick-national-laboratory</guid>
  <pubDate>Wed, 18 Aug 2021 00:19:48 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Head (Bioinformatics Manager III), Cancer Genomics Research Laboratory at  Frederick National Laboratory]]></title>
  <description><![CDATA[
<p>Frederick National Laboratory seeking an enthusiastic, creative, and seasoned bioinformatics professional to join our leadership team and direct the exceptional Bioinformatics Group at the Cancer Genomics Research Laboratory (CGR).  CGR has a diverse team of bioinformatics and computational scientists that support all areas of bioinformatics and data analysis (infrastructure, data QC, pipeline development and maintenance, data curation and sharing, methodology development, statistical analyses, machine learning approaches, and scientific interpretation).</p>

<p>More at https://leidosbiomed.csod.com/ats/careersite/jobdetails.aspx?site=4&amp;c=leidosbiomed&amp;id=2040</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/42664/common-bioinformatics-interview-questions</guid>
	<pubDate>Sat, 23 Jan 2021 06:07:50 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/42664/common-bioinformatics-interview-questions</link>
	<title><![CDATA[Common Bioinformatics Interview Questions !]]></title>
	<description><![CDATA[<p>The possibility of an interview for a bioinformatics position in the life sciences may be very disquieting, but the same concerns emerge time and again in my experience. So, it is exceedingly worthwhile to plan for future bioinformatics interview questions. Doing this will really give you the advantage in obtaining the position.</p><p>The following 5 questions are those that I have heard many times during the job-search process. There is no reason for not planning responses in such situations.</p><p><strong>1. Tell Us About Yourself</strong><br />This is a very typical opener in interviews. It's a perfect question to ask, and getting something planned will really help you concentrate and ease in the conversation. However, you need to make sure that your response is applicable to the job you're interviewing.<br />It's probably better to keep your answer professional. Try to include these in the answer as well: where did your love of science and bioinformatics come from? How the heck did you end up in this field? Why programming and scripting ?</p><p><strong>2. What is your plan for your bioinformatics career? / How do you look at yourself in five years? / How are your personal objectives to accomplish these goals / What are the plan for your research fundings ?</strong></p><p>Your CV/resume has already impressed the selection panel if you have been invited for an interview. The questions from the bioinformatics interview team provide an incentive for you to market yourself and illustrate the work in question with the most appropriate knowledge.</p><p><strong>3. What do you understand about the job description/What would your suggested research path be if you were a successful candidate?</strong><br />Summarize the specifics of the advertised bioinformatics position in your own words. Follow on with some suggestions of how you want to extend your research and create your own projects within the community.</p><p><strong>4. Will you work as a group or do you want to work on your own?</strong><br />This requirement can vary from jobs to job, so when addressing, be alert. A company/research PI may need a bioinformatician that is able to work on a single project autonomously, or they may need a person who can help direct and organize a team. In your response, refer to the job description.</p><p><strong>5. What particular methods have you used to date with your experiments?</strong><br />You might have experience with all the laboratory techniques described in the job description, but stress the ones you highly experienced with. Highlight your professional abilities and stress that you are extremely capable of mastering new techniques with others ...</p><p>At the end of the day, remember that you're questioning the jury as well as they're interviewing you. You will ought to think of any questions you would like the interview panel to pose. This indicates that you have done your homework and serious about the position.</p><p>All the best for your future job interview.</p>]]></description>
	<dc:creator>Jit</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/view/19838</guid>
	<pubDate>Sat, 27 Dec 2014 13:30:15 -0600</pubDate>
	<link>https://bioinformaticsonline.com/view/19838</link>
	<title><![CDATA[Interview with a bioinformatician series ...]]></title>
	<description><![CDATA[<p>The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. Hopefully these answers will prove useful to others in the field, especially to those who are just starting their bioinformatics careers.<br /><br />This series will be available at BOL every fortnight.<br /><br /><br /><br /></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27479/biogps</guid>
	<pubDate>Mon, 23 May 2016 03:15:46 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27479/biogps</link>
	<title><![CDATA[BioGPS]]></title>
	<description><![CDATA[<p>A free&nbsp;<em>extensible</em>&nbsp;and&nbsp;<em>customizable</em>&nbsp;<strong>gene annotation portal</strong>, a complete resource for learning about&nbsp;<strong>gene and protein function</strong>.</p>
<p>http://biogps.org/#goto=welcome</p><p>Address of the bookmark: <a href="http://biogps.org/#goto=welcome" rel="nofollow">http://biogps.org/#goto=welcome</a></p>]]></description>
	<dc:creator>Anjana</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27679/cluego</guid>
	<pubDate>Thu, 02 Jun 2016 09:51:44 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27679/cluego</link>
	<title><![CDATA[ClueGO]]></title>
	<description><![CDATA[<p>ClueGO is a Cytoscape plug-in that visualizes the non-redundant biological terms for large clusters of genes in a functionally grouped network and it can be used in combination with GOlorize.</p><p>Address of the bookmark: <a href="http://www.ici.upmc.fr/cluego/" rel="nofollow">http://www.ici.upmc.fr/cluego/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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