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	<link>https://bioinformaticsonline.com/related/39025?offset=1090</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/28272/bioinformatics-openings-at-icgeb-new-delhi-india</guid>
  <pubDate>Mon, 04 Jul 2016 01:04:05 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics openings at ICGEB NEW DELHI, INDIA]]></title>
  <description><![CDATA[
<p>Applications are invited for:</p>

<p>ICGEB NEW DELHI, INDIA</p>

<p>Biotechnology research positions</p>

<p>Projects include:</p>

<p>a) protein structure determination<br />b) malaria parasite biology<br />c) genomics and metagenomics<br />d) molecular and cellular biology<br />e) bioinformatics and computational biology</p>

<p>Minimum eligibility for students who have already obtained a MSc:</p>

<p>1) INSPIRE award for PhD<br />2) SPM award for PhD<br />3) CSIR/DBT/DST JRF for PhD</p>

<p>Applicants should submit their curriculum vitae by email to: sb.icgeb@gmail.com by 30 August 2016</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/28415/scarpa</guid>
	<pubDate>Wed, 13 Jul 2016 07:59:25 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/28415/scarpa</link>
	<title><![CDATA[Scarpa]]></title>
	<description><![CDATA[<p><strong>Scarpa</strong>&nbsp;is a stand-alone scaffolding tool for NGS data. It can be used together with virtually any genome assembler and any NGS read mapper that supports SAM format. Other features include support for multiple libraries and an option to estimate insert size distributions from data. Scarpa is available free of charge for academic and commercial use under the GNU General Public License (GPL).</p>
<p>See the&nbsp;<a href="http://compbio.cs.toronto.edu/hapsembler/hapsembler-2.21_manual.pdf">user manual</a>&nbsp;or the&nbsp;<a href="http://compbio.cs.toronto.edu/hapsembler/scarpa_paper.pdf">paper</a>&nbsp;for more information about Scarpa. Click&nbsp;<a href="http://compbio.cs.toronto.edu/hapsembler/ScarpaSupplementary.pdf">here</a>&nbsp;for the supplementary material.</p><p>Address of the bookmark: <a href="http://compbio.cs.toronto.edu/hapsembler/scarpa.html" rel="nofollow">http://compbio.cs.toronto.edu/hapsembler/scarpa.html</a></p>]]></description>
	<dc:creator>Poonam Mahapatra</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/28546/ra-bioinformatics-at-national-bureau-of-fish-genetic-resources</guid>
  <pubDate>Mon, 25 Jul 2016 03:14:06 -0500</pubDate>
  <link></link>
  <title><![CDATA[RA Bioinformatics at  National Bureau of Fish Genetic Resources]]></title>
  <description><![CDATA[
<p>F.No. 1(16)/2016-Admn. (DBT-BBSRC Project)<br />Research Associate /JRF Biotechnology Job vacancies in National Bureau of Fish Genetic Resources on contract basis</p>

<p>Research Associate /01 Post</p>

<p>Essential: Ph.D. in Bioinformatics or 03 years research experience after Post Graduation in Bioinformatics with at least one research paper in Science Citation Indexed (SCI) journals.</p>

<p>Desirable:  The candidate should have at least 1st Division during Graduation and Post Graduation.  Experience in assembly/ analysis/ annotation of genomic/transcriptomic data generated on next generation sequencing platforms and working knowledge on different genomic softwares.  Publications in Relevant Field.</p>

<p>Pay Scale : Rs. 36,000/- +20% HRA </p>

<p>Age: 40 years for male and 45 years for female candidates, as on the date of interview</p>

<p>Junior Research Fellow/ 01 </p>

<p>Essential: Master Degree in Biotechnology/Life Science with Specialization in Molecular Biology with NET qualification. </p>

<p>Desirable:  Research Experience in Molecular Biology. 1st Division during Graduation as well as Post Graduation. Publications in Relevant Field.</p>

<p>Pay Scale: Rs. 25,000/-+ 20% HRA for 1st and 2nd year and Rs. 28,000/-+ 20% HRA for 3rd year</p>

<p>Age: 35 years for male and 40 years for female candidates, as on the date of interview.<br />How to apply<br />A walk-in-interview will be held on 26.07.2016 at 10:00 hrs. at ICAR-National Bureau of Fish Genetic Resources, Lucknow.</p>

<p>More at http://www.nbfgr.res.in/Recruitments.aspx</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/28592/bioinformatics-technical-position-at-cdac-pune-india</guid>
  <pubDate>Mon, 01 Aug 2016 03:36:26 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Technical Position at CDAC Pune - India]]></title>
  <description><![CDATA[
<p>CDAC Pune Recruitment 2016 – Apply Online for Technical Positions: Department of Information Technology under the Ministry of Communications and Information Technology, Government of India, Centre for Development of Advanced Computing (C-DAC), Pune has advertised notification for the recruitment of Technical vacancies for for PwD candidates n direct recruitment basis. Eligible candidates can apply Online from 27-07-2016 at 10.00 AM to 31-08-2016 at 18.00 PM.. Other information like age limit, educational qualification, selection process &amp; how to apply are given below… </p>

<p>CDAC Pune Vacancy Details:<br />Total No. of Posts: 23 </p>

<p>Name of the Post: Technical </p>

<p>Name of the Discipline:<br />A. Computer Science/ Information Technology and Allied disciplines. </p>

<p>B.Electronics Communications/ Electrical/ Telecommunication/Instrumentation &amp; Control/ Medical Electronics/ Power Electronics/ VLSI &amp; Embedded System and Allied disciplines. </p>

<p>C.Biotechnology/ Bioinformatics/ Health informatics/ Geoinformatics/ Meteorology/ Environmental Science/ Ocean Sciences/Oceanography/Environmental Engineering </p>

<p>1. Visually Impaired: 09 Posts </p>

<p>2. Hearing Impaired: 08 Posts </p>

<p>3. Orthopedically Impaired: 06 Posts </p>

<p>Educational Qualification : Candidates should possess Graduation in relvany discpline with relevant experience. </p>

<p>Selection Process: Candidates will be selected based on applicants performance in interview. </p>

<p>How to Apply: Eligible candidates can apply online through the website www.cdac.in from 27-07-2016 at 10.00 AM to 31-08-2016 at 18.00 PM. </p>

<p>More at http://www.cdac.in/index.aspx?id=current_jobs</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/28819/research-project-at-iit-madras</guid>
  <pubDate>Wed, 17 Aug 2016 03:26:06 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Project at IIT, Madras]]></title>
  <description><![CDATA[
<p>Two project positions are available to work on (i) molecular modeling and molecular dynamics simulations and (ii) development of bioinformatics databases and tools at Protein Bioinformatics Lab, Department of Biotechnology, IIT Madras.</p>

<p>Duration : Initially for a period of one year. Extendable based on the performance.</p>

<p>Qualification: (i) MSc in Bioinformatics, Biotechnology, Physics, Biophysics, Biochemistry,Computer Science with NET (UGC/CSIR/GATE/BINC/INSPIRE etc) qualification. (OR) (ii) M. Tech in Bioinformatics, Biotechnology</p>

<p>Additional qualification: Programming skills</p>

<p>Candidates who fulfill the requirements of IIT have the possibility to register for PhD.</p>

<p>Fellowship: Rs.25,000 and HRA.</p>

<p>Applicants are encouraged to send the CV to the coordinator by postal mail and e-mail. The deadline to receive the applications is 31st August 2016. The project coordinator has the discretion to restrict the number of candidates to be called for interview to a reasonable limit on the basis of qualifications and experience higher than the minimum prescribed in the announcement.</p>

<p>Project Co-ordinator:</p>

<p>Dr. M. Michael Gromiha <br />Department of Biotechnology <br />Indian Institute of Technology Madras <br />Chennai 600036 <br />Email: gromiha@iitm.ac.in</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/29017/walk-in-interview-jipmer</guid>
  <pubDate>Mon, 05 Sep 2016 04:01:13 -0500</pubDate>
  <link></link>
  <title><![CDATA[WALK-IN INTERVIEW @ JIPMER]]></title>
  <description><![CDATA[
<p>Department of Preventive and Social Medicine<br />, JIPMER, Puducherry –605006</p>

<p>WALK-IN INTERVIEW</p>

<p>JIP/PSM/INDO-US TB/ 2016/</p>

<p>Walk-in-interview for the following vacant posts funded by Department of Biotechnology, Govt.of India for the project entitled “Biomarkers for Risk of Tuberculosis and for Tuberculosis Treatment Failure and Relapse” in the Department of Preventive &amp; Social Medicine, JIPMER, Puducherry.</p>

<p>3. Technical Assistant</p>

<p>MCA/ MSc in Biostatistics/ MSc in Computational Biology from any recognized University @ Rs.23,220 1</p>

<p>Interested candidates may attend the walk-in interview with written screening test on 07, September 2016 at 9.30 A.M in the Dept. of Preventive and Social Medicine, IV Floor, Administrative Block, JIPMER.</p>

<p>The applicants are requested to bring the filled in application form and bio-data with original certificates for verification.</p>

<p>More Info: http://jipmer.edu.in/wp-content/uploads/2016/09/RECRUITEMENTsite-protocol-7.9.2016.pdf</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/28851/senior-manager-bioinformatics-operations-at-rgcb-india</guid>
  <pubDate>Fri, 19 Aug 2016 04:37:17 -0500</pubDate>
  <link></link>
  <title><![CDATA[Senior Manager (Bioinformatics Operations) at RGCB, India]]></title>
  <description><![CDATA[
<p>Senior Manager (Bioinformatics Operations) <br />Rajiv Gandhi Centre for Biotechnology (RGCB) - Thiruvananthapuram, Kerala <br />₹15,600 - ₹39,100 a month<br />Rajiv Gandhi Centre for Biotechnology (RGCB) invites applications for the following positions from Indian citizens with prescribed qualifications </p>

<p>Senior Manager (Bioinformatics Operations) <br />No. of posts: 01 (General) <br />Pay Scale: PB-3 15600-39100 + Grade Pay Rs.6600/- <br />Min. Qualification: PhD in Bioinformatics, , Life Sciences or Computer Science applied to biological questions. <br />A Min. 5 years of experience <br />Age limit: 40 years as on August 01, 2016</p>

<p>More at http://www.rgcb.res.in/positions.php</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/28884/tgnet</guid>
	<pubDate>Wed, 24 Aug 2016 05:36:36 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/28884/tgnet</link>
	<title><![CDATA[TGNet]]></title>
	<description><![CDATA[<p><span>Recent technological progress has greatly facilitated&nbsp;</span><em>de novo</em><span>&nbsp;genome sequencing. However,&nbsp;</span><em>de novo</em><span>&nbsp;assemblies consist in many pieces of contiguous sequence (contigs) arranged in thousands of scaffolds instead of small numbers of chromosomes. Confirming and improving the quality of such assemblies is critical for subsequent analysis.&nbsp;</span></p>
<p>Visualization and quality assessment of de novo genome assemblies</p>
<p>Citation</p>
<p>This software is fully described in the paper:<br>Riba-Grognuz, Keller, Falquet, Xenarios &amp; Wurm (2011) Visualization and quality assessment of de novo genome assemblies.</p>
<p>In brief, our scripts create Cytoscape files to visualize transcript evidence that suggests adjacency between scaffolds and contigs.</p>
<p>Software requirements</p>
<p>BLAT (tested with Standalone BLAT v. 32&times;1). Source Binaries .<br>Cytoscape (tested with versions 2.7.0, 2.8.2)<br>a UNIX machine (tested on Mac OS X 10.6 and CentOS 4.6)</p><p>Address of the bookmark: <a href="https://github.com/ksanao/TGNet" rel="nofollow">https://github.com/ksanao/TGNet</a></p>]]></description>
	<dc:creator>Shruti Paniwala</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/28906/gene-finding-and-predictions</guid>
	<pubDate>Fri, 26 Aug 2016 07:26:27 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/28906/gene-finding-and-predictions</link>
	<title><![CDATA[Gene Finding and Predictions]]></title>
	<description><![CDATA[<p><span>In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approaches. GRAIL, GENSCAN,&nbsp;</span><tt>geneid</tt><span>, FGENESH, GenomeScan, GrailEXP and GENEWISE will be used to annotate the sequence. Both search by signal, content and homology (protein and cDNA sequences) methods will be employed in order to improve the ab initio results. Weak conservation of Start codons will lead to wrong prediction of initial exons in most cases.</span></p>
<p>http://genome.crg.es/courses/Bioinformatics2003_genefinding/</p><p>Address of the bookmark: <a href="http://genome.crg.es/courses/Bioinformatics2003_genefinding/" rel="nofollow">http://genome.crg.es/courses/Bioinformatics2003_genefinding/</a></p>]]></description>
	<dc:creator>Poonam Mahapatra</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/28937/sushi-an-rbioconductor-package-for-visualizing-genomic-data</guid>
	<pubDate>Wed, 31 Aug 2016 08:29:12 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/28937/sushi-an-rbioconductor-package-for-visualizing-genomic-data</link>
	<title><![CDATA[Sushi: An R/Bioconductor package for visualizing genomic data]]></title>
	<description><![CDATA[<p>Sushi: An R/Bioconductor package for visualizing genomic data</p><p>Address of the bookmark: <a href="https://www.bioconductor.org/packages/devel/bioc/vignettes/Sushi/inst/doc/Sushi.pdf" rel="nofollow">https://www.bioconductor.org/packages/devel/bioc/vignettes/Sushi/inst/doc/Sushi.pdf</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

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