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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/40583?offset=150</link>
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	<description><![CDATA[]]></description>
	
	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/42042/cluego-a-cytoscape-plug-in-that-visualizes-the-non-redundant-biological-terms-for-large-clusters-of-genes</guid>
	<pubDate>Thu, 13 Aug 2020 10:24:29 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42042/cluego-a-cytoscape-plug-in-that-visualizes-the-non-redundant-biological-terms-for-large-clusters-of-genes</link>
	<title><![CDATA[ClueGO: a Cytoscape plug-in that visualizes the non-redundant biological terms for large clusters of genes]]></title>
	<description><![CDATA[<p>ClueGO is a Cytoscape plug-in that visualizes the non-redundant biological terms for large clusters of genes in a functionally grouped network and it can be used in combination with GOlorize. The identifiers can be uploaded from a text file or interactively from a network of Cytoscape. The type of identifiers supported can be easely extended by the user. ClueGO performs single cluster analysis and comparison of clusters. From the ontology sources used, the terms are selected by different filter criteria. The related terms which share similar associated genes can be fused to reduce redundancy. The ClueGO network is created with kappa statistics and reflects the relationships between the terms based on the similarity of their associated genes. On the network, the node colour can be switched between functional groups and clusters distribution. ClueGO charts are underlying the specificity and the common aspects of the biological role. The significance of the terms and groups is automatically calculated. ClueGO is easy updatable with the newest files from Gene Ontology and KEGG.</p><p>Address of the bookmark: <a href="http://www.ici.upmc.fr/cluego/" rel="nofollow">http://www.ici.upmc.fr/cluego/</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/view/2021</guid>
	<pubDate>Mon, 12 Aug 2013 09:27:57 -0500</pubDate>
	<link>https://bioinformaticsonline.com/view/2021</link>
	<title><![CDATA[What are the difference between BioRuby and BioGem?]]></title>
	<description><![CDATA[<p>I came across two diferent but matching term BioRuby and BioGem. What are the difference between these two term? If both are using same Ruby language for development then why did they develope two different biological packages.</p>]]></description>
	<dc:creator>Neel</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/20331/type-hinting</guid>
	<pubDate>Fri, 09 Jan 2015 22:26:13 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/20331/type-hinting</link>
	<title><![CDATA[Type Hinting]]></title>
	<description><![CDATA[<p>Python creator Guido van Rossum&rsquo;s proposal for static type-checking annotations is inching closer to reality, and the feature has taken on a new name: type hinting.</p><p><img src="http://sdtimes.com/wp-content/uploads/2015/01/0107.sdt-python-typehinting.png" alt="image" width="619" height="219" style="border: 0px; border: 0px;"></p><p>Back in August, van Rossum published a proposal on the Python mailing list recommending type-checking annotations as a valuable feature for the next version of Python to improve the performance of editors and IDEs, linter capabilities, standard notation, and refactoring. Van Rossum&rsquo;s <a href="http://lwn.net/Articles/627558/">latest proposal</a>, posted late last month, outlined plans to publish a Python Enhancement Proposal (PEP) in early January to put the feature now known as type hinting on track for inclusion in Python 3.5, slated for release this September.</p><p>Reference</p><p>https://quip.com/r69HA9GhGa7J</p>]]></description>
	<dc:creator>Pranjali Yadav</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/36413/insert-data-through-ajax-into-mysql-database</guid>
	<pubDate>Wed, 25 Apr 2018 12:43:51 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/36413/insert-data-through-ajax-into-mysql-database</link>
	<title><![CDATA[Insert data through ajax into MySql database.]]></title>
	<description><![CDATA[<p>Insert data through ajax into MySql database.1. Create form.php and copy below code into file.</p><blockquote><p>&lt;script type="text/javascript"&gt;<br /> <br /> $(document).ready(function(){<br /> $('#submit').click(function(){<br /> var name= $('#name').val();<br /> var email= $('#email').val();<br /> var sdatatring='name1='+ name +'&amp;email1='+ email;<br /> $.ajax({<br /> type:"POST",<br /> url:"insert.php",<br /> data:sdatatring,<br /> cache: false,<br /> success:function(result){<br /> alert(result);</p><p>}});</p><p>});</p><p>});<br />&lt;/script&gt;<br /> &lt;form method="post" action="" name="frm"&gt;<br /> Name:&lt;input type="text" name="name" id="name" value=""&gt;&lt;br&gt;<br /> Email:&lt;input type="text" name="email" id="email" value=""&gt;&lt;br&gt;<br /> &lt;input type="button" name="submt" id="submit" value="submit" /&gt;<br /> <br /> &lt;/form&gt;</p><p>2. Create insert.php and copy below code into file.<br /> &lt;?php<br />print_r($_POST);<br />$con=mysql_connect("localhost","root","");<br />mysql_select_db('dbname');<br />mysql_query('insert into tablename('colname')values(value)');<br /> ?&gt;<br />Note:You need to include jQuery library in form.php.</p></blockquote><p>More at</p><p>https://phpajaxhtml.blogspot.in/2018/03/insert-data-through-ajax-into-mysql.html</p>]]></description>
	<dc:creator>Ram Yash Pal</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/40724/the-raku-programming-language</guid>
	<pubDate>Tue, 28 Jan 2020 05:37:17 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/40724/the-raku-programming-language</link>
	<title><![CDATA[The Raku Programming Language]]></title>
	<description><![CDATA[<p><span>Raku is a member of the Perl family of programming languages. Formerly known as Perl 6, it was renamed in October 2019. Raku introduces elements of many modern and historical languages. Compatibility with Perl was not a goal, though a compatibility mode is part of the specification.</span><span>&nbsp;</span></p>
<p><span>More at&nbsp;<a href="https://www.raku.org/">https://www.raku.org/</a></span></p><p>Address of the bookmark: <a href="https://www.raku.org/" rel="nofollow">https://www.raku.org/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/poll/view/34791/what-programming-language-do-you-hate-the-most</guid>
	<pubDate>Sat, 23 Dec 2017 03:46:49 -0600</pubDate>
	<link>https://bioinformaticsonline.com/poll/view/34791/what-programming-language-do-you-hate-the-most</link>
	<title><![CDATA[What programming language do you hate the most?]]></title>
	<description><![CDATA[<p>There are many programming languages, which one you dislike the most?</p>]]></description>
	<dc:creator>BioStar</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/924/try-r-online</guid>
	<pubDate>Tue, 16 Jul 2013 06:15:11 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/924/try-r-online</link>
	<title><![CDATA[Try R Online]]></title>
	<description><![CDATA[<p>One of the best R tutorial website, which provide an online interative interface to try and learn R language without any hassle.</p><p>Link @ http://tryr.codeschool.com/</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/3046/r-and-bioconductor-tutorial</guid>
	<pubDate>Fri, 23 Aug 2013 08:23:59 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/3046/r-and-bioconductor-tutorial</link>
	<title><![CDATA[R and Bioconductor Tutorial]]></title>
	<description><![CDATA[<p>This tutorial is intended to introduce users quickly to the basics of R, focusing on a few common tasks that &nbsp;biologists need to perform &nbsp;some basic analysis: &nbsp;load a table, plot some graphs, and perform some basic statistics. More extensive tutorials can be found on the project website and via bioconductor (not covered here).</p>
<p>You can add more tutorial links in comments if found new pages.</p><p>Address of the bookmark: <a href="http://manuals.bioinformatics.ucr.edu/home/R_BioCondManual" rel="nofollow">http://manuals.bioinformatics.ucr.edu/home/R_BioCondManual</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/11030/r-programming-and-jobs-website</guid>
	<pubDate>Sun, 25 May 2014 14:43:57 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/11030/r-programming-and-jobs-website</link>
	<title><![CDATA[R programming and Jobs website]]></title>
	<description><![CDATA[<p>Welcome to the R Jobs section of ProgrammingR.com. If your organization has an R employment opportunity that you would like to have posted here, submit it via the <a href="http://www.programmingr.com/contact" title="contact page">contact page</a>. Prospective employees: use the contact information provided in the position listing to apply or contact the hiring organization.</p><p>Address of the bookmark: <a href="http://www.programmingr.com/category/stype/r-job-listings/" rel="nofollow">http://www.programmingr.com/category/stype/r-job-listings/</a></p>]]></description>
	<dc:creator>Pragati Singh</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/19087/dcgor</guid>
	<pubDate>Sat, 08 Nov 2014 14:54:28 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/19087/dcgor</link>
	<title><![CDATA[dcGOR]]></title>
	<description><![CDATA[<p>An R package for analysing ontologies and protein domain annotations has been published in PLoS Computational Biology (http://dx.doi.org/10.1371/journal.pcbi.1003929). The package is distributed as part of CRAN (http://cran.r-project.org/package=dcGOR), and also at GitHub for version control.<br /><br />The dedicated website is available in http://supfam.org/dcGOR, from which several demos are also provided:<br /><br />1. Analysing SCOP domains: http://supfam.org/dcGOR/demo-Fang.html<br /><br />2. Analysing Pfam domains: http://supfam.org/dcGOR/demo-Basu.html<br /><br />3. Analysing InterPro domains: http://supfam.org/dcGOR/demo-Customisation.html<br /><br />&nbsp;</p>]]></description>
	<dc:creator>Martin Jones</dc:creator>
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