<![CDATA[BOL: Related items]]> https://bioinformaticsonline.com/related/40703?offset=100 https://bioinformaticsonline.com/bookmarks/view/43112/calling-variants-in-non-diploid-systems Sat, 26 Jun 2021 15:37:49 -0500 https://bioinformaticsonline.com/bookmarks/view/43112/calling-variants-in-non-diploid-systems <![CDATA[Calling variants in non-diploid systems]]> The main challenge associated with non-diploid variant calling is the difficulty in distinguishing between the sequencing noise (abundant in all NGS platforms) and true low frequency variants. Some of the early attempts to do this well have been accomplished on human mitochondrial DNA although the same approaches will work equally good on viral and bacterial genomes (Rebolledo-Jaramillo et al. 2014, Li et al. 2015).

Address of the bookmark: https://training.galaxyproject.org/training-material/topics/variant-analysis/tutorials/non-dip/tutorial.html

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