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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/40832?offset=30</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44756/phd-hunt-your-gateway-to-nordic-academic-opportunities</guid>
	<pubDate>Thu, 02 Jan 2025 19:55:22 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44756/phd-hunt-your-gateway-to-nordic-academic-opportunities</link>
	<title><![CDATA[PhD Hunt: Your Gateway to Nordic Academic Opportunities]]></title>
	<description><![CDATA[<p>Embarking on a PhD journey is a transformative step in academia. To ease this transition, we brings you a curated list of top resources and institutions across Denmark, Sweden, Norway, and Finland. These links will guide you through finding opportunities and navigating the academic landscape in the Nordic region.</p><p><strong>PhD Opportunities in Denmark Denmark boasts a robust academic infrastructure with world-class universities. Here are some essential resources:</strong></p><p>Study in Denmark: <a>https://studyindenmark.dk</a></p><p>Aarhus University: <a>https://phd.au.dk</a></p><p>Euraxess Denmark: <a>https://euraxess.dk</a></p><p>Technical University of Denmark (DTU): <a>https://dtu.dk</a></p><p>University of Copenhagen: <a>https://phd.ku.dk</a></p><p>Copenhagen Business School: <a>https://cbs.dk</a></p><p>Jobindex: <a>https://jobindex.dk</a></p><p>Roskilde University: <a>https://ruc.dk</a></p><p>University of Southern Denmark: <a>https://sdu.dk</a></p><p>Academic Positions Denmark: <a>https://academicpositions.dk</a></p><p><strong>PhD Opportunities in Sweden Sweden is renowned for its innovation-driven academic culture. Here&rsquo;s where you can find opportunities:</strong></p><p>FindAPhD Sweden: <a>https://findaphd.com/phds/sweden</a></p><p>Euraxess Sweden: <a>https://euraxess.se</a></p><p>Academic Positions Sweden: <a>https://academicpositions.se</a></p><p>KTH Royal Institute of Technology: <a>https://kth.se</a></p><p>Lund University: <a>https://lu.se</a></p><p>Uppsala University: <a>https://uu.se</a></p><p>Chalmers University of Technology: <a>https://chalmers.se</a></p><p>Link&ouml;ping University: <a>https://liu.se</a></p><p>Stockholm University: <a>https://su.se</a></p><p>Swedish University of Agricultural Sciences (SLU): <a>https://slu.se</a></p><p>Study in Sweden: <a>https://studyinsweden.se</a></p><p>Malm&ouml; University: <a>https://mau.se</a></p><p><strong>PhD Opportunities in Norway Norway offers unique research opportunities, complemented by its stunning natural landscapes:</strong></p><p>JobbNorge: <a>https://jobbnorge.no</a></p><p>Euraxess Norway: <a>https://euraxess.no</a></p><p>University of Oslo: <a>https://uio.no</a></p><p>Norwegian University of Science and Technology (NTNU): <a>https://ntnu.edu</a></p><p>Norwegian Business School (BI): <a>https://bi.edu</a></p><p>Norwegian School of Economics: <a>https://nhh.no</a></p><p>Norwegian University of Life Sciences (NMBU): <a>https://nmbu.no</a></p><p>Norwegian School of Sport Sciences: <a>https://nih.no</a></p><p>University of Bergen: <a>https://uib.no</a></p><p>Nord University: <a>https://nord.no</a></p><p>UiT The Arctic University of Norway: <a>https://uit.no</a></p><p><strong>PhD Opportunities in Finland Finland&rsquo;s education system emphasizes research excellence and innovation. Explore these resources</strong>:</p><p>FindAPhD Finland: <a>https://findaphd.com/phds/finland</a></p><p>Euraxess Finland: <a>https://euraxess.fi</a></p><p>University of Helsinki: <a>https://helsinki.fi</a></p><p>Aalto University: <a>https://aalto.fi</a></p><p>University of Turku: <a>https://utu.fi</a></p><p>Tampere University: <a>https://tuni.fi</a></p><p>University of Eastern Finland: <a>https://uef.fi</a></p><p>University of Jyv&auml;skyl&auml;: <a>https://jyu.fi</a></p><p>&Aring;bo Akademi University: <a>https://abo.fi</a></p><p>Hanken School of Economics: <a>https://hanken.fi</a></p><p>LUT University: <a>https://lut.fi</a></p><p>Conclusion The Nordic countries offer exceptional opportunities for PhD aspirants. From top-ranked universities to specialized research institutions, the possibilities are endless. Bookmark PhD Hut as your starting point, and let these resources guide you to your academic aspirations.</p>]]></description>
	<dc:creator>LEGE</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/45351/ai-uncovers-hidden-secrets-in-bacterial-dna-opening-new-frontiers-in-genomic-research</guid>
	<pubDate>Fri, 25 Sep 2026 22:38:42 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/45351/ai-uncovers-hidden-secrets-in-bacterial-dna-opening-new-frontiers-in-genomic-research</link>
	<title><![CDATA[AI Uncovers Hidden Secrets in Bacterial DNA, Opening New Frontiers in Genomic Research]]></title>
	<description><![CDATA[<div style="margin-top: 0.5em; margin-bottom: 0.5em;">Scientists are now using artificial intelligence in order to examine sections of bacterial DNA that have not been looked at before. This method is showing potential RNA interactions and previously unknown genetic systems which could alter our understanding of microbes. A new study presents Minerva, a genome language model, demonstrating that AI can assist researchers in identifying biological patterns that traditional techniques might fail to detect.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">The study, which was made available as a preprint on bioRxiv on 23 September 2026, focuses on the non-coding sections of DNA that are still largely unknown. Although these areas do not produce proteins, they can contain important signals and instructions which have an effect on cell function. The research presents a novel approach to investigating how bacteria handle and control their genetic information.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;"><span style="font-weight: bold;">AI maps previously unexplored genomic regions</span></div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">The team developed Minerva in order to identify possible interactions between different regions in microbial genomes; rather than depending on similarities with known sequences, Minerva predicts these relationships directly from the DNA by using patterns learned by a genome language model.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">On 150 bacterial genomes, Minerva identified a large number of interactions that were not included in the existing annotations. The researchers stated that 84.3 per cent of the predicted intergenic base-pairing interactions were not present in the current annotations, which demonstrates that AI can be of help in generating new ideas in biology.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;"><span style="font-weight: bold;">Unusual RNA structures and viral genetic systems identified</span></div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">The study also examined a bacterial RNA family known as TwoAYGGAY in Pseudomonas; the model anticipated longer RNA structures and identified associations with repeated DNA sequences, thus providing new insights into how these non-coding elements are organised and how they have evolved.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">In a separate section of the study, the researchers examined reverse transcriptase systems associated with bacteriophages, which are viruses that infect bacteria. They identified RNA arrays that maintain their structure but have different sequences and were linked to Unknown Group 27 reverse transcriptases. The findings indicate that these RNAs could function as templates for the production of complementary DNA that is capable of forming hairpin shapes.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">The researchers also observed that Minerva was able to detect patterns associated with protein-coding areas, even though it had not been trained to do so. This indicates that genome language models may pick up on biological signals that go beyond what they were intended to identify.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;"><span style="font-weight: bold;">Implications for future genomic research</span></div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">The fact that artificial intelligence is becoming increasingly important in the field of microbial genomics is shown by the fact that models such as Minerva are able to predict interactions and identify patterns in areas which have not been extensively studied, thus helping researchers to decide what to study next and enabling them to gain a better understanding of biological systems that are still not well understood.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">Yet the predictions do not reveal the exact function of each element identified. In order to verify which of the predicted interactions actually take place in living cells and the way in which they affect the microbes, experiments will be necessary. Although the study has undergone peer review, it does nonetheless offer a promising illustration of how machine learning can complement traditional genomics and assist scientists in moving from the identification of known genes to the exploration of the complex relationships that shape microbial life.</div><div style="margin-top: 0.5em; margin-bottom: 0.5em;">More at https://www.biorxiv.org/content/10.64898/2026.09.22.753630v2.full.pdf</div><div style="color: #000000; font-size: medium;">&nbsp;</div>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/40959/bioinformatics-related-group</guid>
	<pubDate>Sun, 09 Feb 2020 03:17:16 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/40959/bioinformatics-related-group</link>
	<title><![CDATA[Bioinformatics related group]]></title>
	<description><![CDATA[<p>FaBI emerged from the respective groups of the four founding societies GI (German Informatics Society), DECHEMA (Society for Chemical Engineering and Biotechnology), GBM (Society for Biochemistry and Molecular Biology) and GDCh (German Chemical Society). In fall 2015, the GMDS (German Society for Medical Informatics, Biometry, and Epidemiology) joined FaBI. FaBI represents more than 750 members today and considers itself as a joint representation of interests of bioinformatics research in Germany and as an interlocutor for politics, economy, and society aiming at a strong informatics-based life science research.</p><p>Address of the bookmark: <a href="https://bioinformatik.de/en/bioinformatics-in-germany/research/research-groups.html" rel="nofollow">https://bioinformatik.de/en/bioinformatics-in-germany/research/research-groups.html</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44299/research-rabbit</guid>
	<pubDate>Fri, 07 Apr 2023 12:01:33 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44299/research-rabbit</link>
	<title><![CDATA[Research Rabbit]]></title>
	<description><![CDATA[<p>You&rsquo;re determined students, passionate teachers, and inspired creators of everything we know!<span> </span>Yet, all the researchers we spoke with over the past year uncovered the same reality:</p>
<p>Despite the degrees you&rsquo;ve earned, the effort and passion you put in every day, the sacrifices you make &ndash; academia burdens you with tons of stressors. Financial, psychological, physical, and more.</p>
<p>We&rsquo;re an unconventional team with backgrounds in various fields &ndash; both inside and outside of academia. And through our lens, it&rsquo;s clear that academia deeply undervalues and underserves its very own community!<span> </span></p>
<p>It&rsquo;s time to reimagine research.</p><p>Address of the bookmark: <a href="https://researchrabbitapp.com/" rel="nofollow">https://researchrabbitapp.com/</a></p>]]></description>
	<dc:creator>LEGE</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/42264/bioinformatics-jobs-at-acrannolife</guid>
  <pubDate>Sun, 25 Oct 2020 22:51:35 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics jobs at Acrannolife]]></title>
  <description><![CDATA[
<p>Acrannolife are looking for skilled Bioinformatics Scientists with a minimum of 2yrs Experience in NGS data analysis including Nanopore Sequencing.</p>

<p>This is an opportunity to work on projects that would fundamentally alter the way certain chronic conditions are treated and monitored.</p>

<p>About acrannolife:</p>

<p>We are a team of Post Docs, PhDs, Engineers, Clinicians, and MBAs working towards a future where biology intersects with software(Computational Biology).</p>

<p>We are incubated in Atal Incubation Centre - CCMB and have been backed by some of the leading thought leaders ranging from business to clinical practices.</p>

<p>Interested candidates can fill this form. https://lnkd.in/gtq47hy</p>

<p>and send their CV to hr@acrannolife.com</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/1123/online-courses-for-biology-beginners</guid>
	<pubDate>Thu, 18 Jul 2013 13:28:59 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/1123/online-courses-for-biology-beginners</link>
	<title><![CDATA[Online Courses for biology beginners]]></title>
	<description><![CDATA[<p>Most of the time we face some biological problems while analysing our data computationally. This bookmark is being created to provide list of all free online courses at one place. If you know any other good online cource resources to learn biology please let me know.</p>
<p>&nbsp;</p><p>Address of the bookmark: <a href="http://ocw.mit.edu/courses/index.htm" rel="nofollow">http://ocw.mit.edu/courses/index.htm</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/8828/drew-berry-animations-of-unseeable-biology</guid>
	<pubDate>Mon, 10 Mar 2014 06:44:59 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/8828/drew-berry-animations-of-unseeable-biology</link>
	<title><![CDATA[Drew Berry: Animations of unseeable biology]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/WFCvkkDSfIU" frameborder="0" allowfullscreen></iframe>http://www.ted.com We have no ways to directly observe molecules and what they do -- Drew Berry wants to change that. At TEDxSydney he shows his scientifically accurate (and entertaining!) animations that help researchers see unseeable processes within our own cells.

TEDTalks is a daily video podcast of the best talks and performances from the TED Conference, where the world's leading thinkers and doers give the talk of their lives in 18 minutes. Featured speakers have included Al Gore on climate change, Philippe Starck on design, Jill Bolte Taylor on observing her own stroke, Nicholas Negroponte on One Laptop per Child, Jane Goodall on chimpanzees, Bill Gates on malaria and mosquitoes, Pattie Maes on the "Sixth Sense" wearable tech, and "Lost" producer JJ Abrams on the allure of mystery. TED stands for Technology, Entertainment, Design, and TEDTalks cover these topics as well as science, business, development and the arts. Closed captions and translated subtitles in a variety of languages are now available on TED.com, at http://www.ted.com/translate

If you have questions or comments about this or other TED videos, please go to http://support.ted.com]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/9859/bioinformatics-jrfsrf-position-at-university-of-hyderabad</guid>
  <pubDate>Tue, 15 Apr 2014 20:07:52 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics JRF/SRF position at University of Hyderabad]]></title>
  <description><![CDATA[
<p>UNIVERSITY OF HYDERABAD SCHOOL OF LIFE SCIENCES </p>

<p>Applications are invited from qualified individuals for a JRF/SRF position (sponsored by DBT/DST) at Prof. Jagan Pongubala’s laboratory, University of Hyderabad. Dr. Pongubala’s laboratory is investigating the molecular pathways that control the development of innate and adaptive immune cell types utilizing a combination of genetic, molecular and computational approaches.</p>

<p>JRF/SRF</p>

<p>Masters degree in Bioinformatics  (M.Sc./M.Tech.)</p>

<p>Rs. 12,000+HRA<br />Rs. 16,000+HRA</p>

<p>Initial appointment is for one year and  subjected to renewal up to 2 years</p>

<p>Candidates selected for the above position would have a choice to work on computational biology or experimental  biology. Candidates interested to work on computational biology are expected to perform high-throughput sequencing  (NGS) data analysis and should have a strong background in Bioinformatics &amp; Computational Biology, good  programming skills particularly Perl, Python, R and work experience in Linux environment.</p>

<p>Candidates interested to work on experimental biology should have work experience in techniques that are routinely  used in molecular biology and mammalian cell culture. A basic knowledge of bioinformatics is also desired. </p>

<p>Applicants for the above positions should have a Masters degree (M.Tech/M.Sc) with an aggregate marks greater  than 70% or a 7.5 CGPA. Candidates having JRF-fellowship through CSIR/UGC/ICMR/DBT will be encouraged  to enroll into Ph.D. program. The interested candidates having excellent organizational skills and the ability to work  in a team environment with an aspiration to learn new techniques and explore new scientific areas are requested to generate their resume using the link https://cvmkr.com/CV/new#0 and forward to pongubalajagan@gmail.com</p>

<p>Review of applications will begin immediately and continue until the position is filled. Eligible candidates will be called for an interview. No TA/ DA will be paid for attending the interview or at the time of joining the post. Applicants should note that the appointment is purely temporary and subjected to renewal up to three years and there is no Right to Claim for any regular appointment with the University.</p>

<p>Corresponding address: Jagan Pongubala, Ph.D.<br />Department of Animal Sciences<br />School of Life Sciences, Room:S44<br />University of Hyderabad<br />Gachibowli, Hyderabad 500046</p>

<p>Advertisement: https://www.uohyd.ac.in/images/recruitment/jrf-srf_130414.pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/10262/research-fellow-phd-candidate-in-computational-biology-%E2%80%93-2-positions</guid>
  <pubDate>Fri, 25 Apr 2014 20:19:58 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research fellow (PhD candidate) in computational biology – 2 positions]]></title>
  <description><![CDATA[
<p>At the Department of Informatics two 4-year positions as research fellow are available in the field of computational biology connected to the Computational Biology Unit. The positions are linked to the project “Integrated genomics - linking transcriptional and translational regulation over developmental time” supported by the Bergen Research Foundation</p>

<p>The fate of a cell is ultimately the product of the regulation of its genes. Gene regulation is a coordinated process acting at multiple levels of which transcription and translation are the most prominent. The Valen group is dedicated to the fundamental question of how transcription and translation is integrated to obtain the desired protein abundance. The recent development of high-throughput next generation sequencing techniques to monitor both active translation and transcription has made it possible to study this connection at the genome scale.</p>

<p>This project aims to elucidate the links between regulation of translation and transcription. The applicant will analyze next generation sequencing data and model gene regulation on a genome-wide level to identify the features that affect the translational output of transcripts. The work will be done in close collaboration with experimental scientists who will test the predictions of the computational models.</p>

<p>Additional information on the position can be obtained by contacting Eivind Valen (eivind.valen@ii.uib.no).</p>

<p>The research fellow must take part in the University’s approved PhD program leading to the degree within a time limit of 3 years. Application for admission to the PhD program, including a project plan outline for the training module, will be worked out in collaboration with the research group in question.</p>

<p>In total, the fellowship period is 4 years, 25 % of this will be allocated to teaching and/or administrative duties. The fellowship period may be reduced if the successful applicant has held previous employment as a research fellow or similar.</p>

<p>http://www.jobbnorge.no/en/available-jobs/job/102235/research-fellow-phd-candidate-in-computational-biology-2-positions</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/10460/assistant-professor-at-jawaharlal-nehru-university-in-delhi</guid>
  <pubDate>Wed, 07 May 2014 00:29:22 -0500</pubDate>
  <link></link>
  <title><![CDATA[Assistant Professor at Jawaharlal Nehru University in Delhi]]></title>
  <description><![CDATA[
<p>Advt. No. RC/48/2014</p>

<p>SCHOOL OF COMPUTATIONAL AND INTEGRATIVE SCIENCES (SC&amp;IS)</p>

<p>ESSENTIAL QUALIFICATION : - M.Sc./M.Tech. in Physics/ Chemistry/ Biology/ Mathematics/ Statistics/ Bioinformatics/ Computational Biology. Ph.D. in the broad areas of Bioinformatics/ Computational Biology. Candidates must have demonstrated capabilities in terms of high impact research publications in either of the above mentioned areas.</p>

<p>Scale of Pay : - 15600-39100/- (PB-III) AGP Rs. 6000/-</p>

<p>For more details on Centre/School, Specializations etc. please visit JNU website www.jnu.ac.in or contact Section Officer, Room Nos. 131-132, Recruitment Cell, Administrative Block, JNU, New Delhi – 110067, Email: recruitmentjnu2013@gmail.com The last date for the receipt of application is 15 May, 2014.</p>

<p>http://www.jnu.ac.in/Career/</p>

<p>http://www.jnu.ac.in/Career/ADVTNo_RC_48_2014.pdf<br />Last Apply Date:</p>

<p>15 May 2014</p>
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