BioStar
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Sequanix: a dynamic graphical interface for Snakemake workflows
By BioStar 1747 days agogithub.com - A Python library dedicated to NGS analysis (e.g., tools to visualise standard NGS formats). A set of pipelines dedicated to NGS in the form of Snakefiles (Makefile-like with Python syntax based on snakemake framework) with more than 80 re-usable...SOAP2 : Short Oligonucleotide Analysis Package 2
By Poonam Mahapatra 2376 days agosoap.genomics.org.cn - SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Package). It is an updated version of SOAP software for short oligonucleotide alignment. The new program features in super fast and accurate alignment for huge amounts of...Genobuntu: Package for Next Generation Sequencing and Genome Assembly
By BioStar 1650 days agosourceforge.net - Genobuntu is a software package containing more than 70 software and packages oriented towards NGS. In its current version, Genobuntu supports pre assembly tools, genome assemblers as well as post assembly tools.Commonly used biological software and...Genobuntu: A software package containing more than 70 software and packages oriented towards NGS...
By BioStar 2174 days agosourceforge.net - Genobuntu is a software package containing more than 70 software and packages oriented towards NGS. In its current version, Genobuntu supports pre assembly tools, genome assemblers as well as post assembly tools. Commonly used biological...OMTools: a software package for visualizing and processing optical mapping data
By BioJoker 2067 days agogithub.com - OMTools, an efficient and intuitive data processing and visualization suite to handle and explore large-scale optical mapping profiles. OMTools includes modules for visualization (OMView), data processing and simulation. These modules together form...kebabs: package provides functionality for kernel based analysis of biological sequences via...
By Rahul Nayak 996 days agowww.bioinf.jku.at - The kebabs package provides functionality for kernel based analysis of biological sequences via Support Vector Machine (SVM) based methods. Biological sequences include DNA, RNA, and amino acid (AA) sequences. Sequence kernels define...Rdatamining.com : R and Data Mining
By Poonam Mahapatra 4118 days agowww.rdatamining.com - This website presents examples, documents and resources on data mining with R. Documents on using R for data mining are available to download for non-commercial personal use, including R Reference card for Data Mining, R and Data Mining:...Upgrade R 3.0.3
By Rahul Nayak 3911 days agoR 3.0.3 (codename “Warm Puppy) was released several days ago.Surrogate Variable Analysis (SVA)
By Jit 3677 days agoThe sva package contains functions for removing batch effects and other unwanted variation in high-throughput experiment.
