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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/4220?offset=90</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26303/maker</guid>
	<pubDate>Sun, 07 Feb 2016 15:59:24 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26303/maker</link>
	<title><![CDATA[MAKER]]></title>
	<description><![CDATA[<p>MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. MAKER identifies repeats, aligns ESTs and proteins to a genome, produces ab-initio gene predictions and automatically synthesizes these data into gene annotations having evidence-based quality values.</p>
<p>More at http://www.yandell-lab.org/software/maker.html</p><p>Address of the bookmark: <a href="http://www.yandell-lab.org/software/maker.html" rel="nofollow">http://www.yandell-lab.org/software/maker.html</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27473/project-assistantjunior-research-fellow-position-at-centre-of-biomedical-research-sanjay-gandhi-postgraduate-institute-of-medical-sciences-campus-lucknow</guid>
  <pubDate>Mon, 23 May 2016 01:31:29 -0500</pubDate>
  <link></link>
  <title><![CDATA[Project Assistant/Junior Research Fellow Position at  Centre of Biomedical Research, Sanjay Gandhi Postgraduate Institute of Medical Sciences Campus, Lucknow.]]></title>
  <description><![CDATA[
<p>Applications are invited from eligible candidates willing to join in a Department of Science and Technology (DST) project entitled “"Mapping neural regions involved in reading process in skilled adult Deaf reader: From neuroimaging perspective (functional Magnetic Resonance Imaging (fMRI) and Diffuse Tensor Imaging (DTI.)" as a Project Assistant/Junior Research Fellow (JRF) at Centre of Biomedical Research, Sanjay Gandhi Postgraduate Institute of Medical Sciences Campus, Lucknow.</p>

<p>Essential Qualification:</p>

<p>1. Master's degree in Bioinformatics / Computer Applications / Cognitive Science /Neuroscience/ Neuropsychology or equivalent. (Advantage will be given to NET JRF qualified candidate) Additional</p>

<p>Desirable Skills:</p>

<p>1) Programming skills (e.g., C++, Matlab, Python) 2) Experience/competent in working Window and Linux based programme.</p>

<p>Please mail your CV and covering letter to dr.uttam.kumar@gmail.com.</p>

<p>To know more about lab works please visit http://uttambrainlab.co.in/lab/.</p>

<p>Last date: 15/06/16</p>

<p>Advertisement: http://cbmr.res.in/wp-content/uploads/2016/05/Advertisement-19-5-2016.pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/32496/bioinformatician-at-23andme</guid>
  <pubDate>Sat, 06 May 2017 17:57:39 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatician at 23andMe]]></title>
  <description><![CDATA[
<p>23andMe’s mission is to help people access, understand, and benefit<br />from the human genome. We are a group of passionate individuals excited<br />to push the boundaries of what’s possible to help turn genetic insight<br />into better health and personal understanding.</p>

<p>Our Research Team prides itself on driving cutting edge, industrial-scale<br />science to make an impact that belies the team’s size, in an environment<br />and culture that fosters creativity, innovation, collaboration, and fun.</p>

<p>More than 80% of our customers consent to participate in research, and as<br />a result of their participation, we have one of the largest recontactable,<br />genotyped, and phenotyped research cohorts in the world. The scope and<br />breadth of our vision means that most of the methods and tools necessary<br />to unlock the potential of this unique resource for discovery have yet<br />to be developed.</p>

<p>Our science has garnered the respect of many members of the<br />broader scientific community. For a list of our publications, see<br />www.23andme.com/publications/for-scientists/.</p>

<p>Join us! Visit our Careers page (www.23andMe.com/careers) to learn more<br />about these open positions:</p>

<p>•	Scientist, Research Communications<br />•	Bioinformaticist<br />•	Computational Biologist, Ancestry R&amp;D<br />•	Scientist/Senior Scientist, Statistical Genetics<br />•	Scientist/Senior Scientist, Survey Methodology<br />•	Scientist/Senior Scientist, Health R&amp;D<br />•	Senior Computational Biologist<br />•	Biostatistician</p>

<p>pfontanillas@23andme.com</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/37248/postdoctoral-research-assistant-at-rvc</guid>
  <pubDate>Mon, 09 Jul 2018 00:47:38 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Research Assistant at RVC]]></title>
  <description><![CDATA[
<p>This is a fixed term post for 24 months.</p>

<p>We wish to recruit a highly motivated, postdoctoral scientist to carry out a BBSRC funded project in the laboratory of Dr. Denis Larkin. The project is focused on developing and applying new methods and algorithms to study genome and chromosome evolution in mammals and other animals using whole-genome sequences and existing algorithms (e.g., Damas et al. Genome Res. 2017. 27(5):875-884; Kim et al., Proc Natl Acad Sci USA. 2013. 110 (5)). The post holder will use cutting edge computational and laboratory approaches to generate chromosomal assemblies for sequenced genomes, study chromosomal structures and differences between mammalian and other vertebrate genomes in attempt to identify species- and clade-specific genome signatures.</p>

<p>Applicants must have a Ph.D. and a track record of success, as indicated by first-author publications in international journals. They must possess excellent organisation skills and be capable of individual initiative and of interacting as part of a team. Applicants with extensive practical experience in bioinformatics or computer science, programming, visualization, handling of large data sets, high-performance computing are encouraged to apply. The post will involve collaboration with a wide range of academic partners both within the EU and worldwide.</p>

<p>Experience in programming, bioinformatics and comparative genome analysis is essential. Applicants should have a minimum of a degree and preferably a higher degree in a relevant subject.</p>

<p>The Royal Veterinary College has the largest range of veterinary, para-veterinary and animal science undergraduate and postgraduate courses of any veterinary school in the world and is one of the largest veterinary schools in Europe.</p>

<p>Prospective applicants are encouraged to contact Dr. Denis Larkin, Comparative Biomedical Sciences Department on +442071211906 or email: dlarkin@rvc.ac.uk</p>

<p>We offer a generous reward package.</p>

<p>For further information and to apply on-line please visit our website: www.rvc.ac.uk<br />Job reference CBS-0084-18</p>

<p>https://jobs.rvc.ac.uk/Vacancy.aspx?ref=CBS-0084-18</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41689/medaka-sequence-correction-provided-by-ont-research</guid>
	<pubDate>Mon, 18 May 2020 16:28:00 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41689/medaka-sequence-correction-provided-by-ont-research</link>
	<title><![CDATA[medaka: Sequence correction provided by ONT Research]]></title>
	<description><![CDATA[<p><code>medaka</code><span>&nbsp;is a tool to create a consensus sequence from nanopore sequencing data. This task is performed using neural networks applied from a pileup of individual sequencing reads against a draft assembly. It outperforms graph-based methods operating on basecalled data, and can be competitive with state-of-the-art signal-based methods, whilst being much faster.</span></p><p>Address of the bookmark: <a href="https://github.com/nanoporetech/medaka" rel="nofollow">https://github.com/nanoporetech/medaka</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/42172/sr-scientist-bioinformatics-vacancies-at-indian-institute-of-toxicology-research-india</guid>
  <pubDate>Tue, 01 Sep 2020 07:21:04 -0500</pubDate>
  <link></link>
  <title><![CDATA[Sr. Scientist Bioinformatics Vacancies at Indian Institute of Toxicology Research, India]]></title>
  <description><![CDATA[
<p>Start date of online Registration: Wednesday August 19, 2020 11:00 Hrs IST<br />Last date for Registration: Monday September 21, 2020 17:30 Hrs IST<br />Last date for submission of online application: Monday September 21, 2020 17:30 Hrs IST<br />Last date of Receipt of physical copy of application at CSIR-IITR: Tuesday October 05, 2020 17:30 Hrs IST</p>

<p>Pay Matrix Level-12<br />No. of Post-01<br />(UR)<br />Post – Sr. Scientist<br />Area Bioinformatics<br />Age limit : 37 years<br />PhD in Computational Biology/Bioinformatics with 2 years experience in desired area<br />Or<br />ME/M.Tech in Bioinformatics or Genome Informatics or Genetic Engineering with 3 years experience in desired area<br />Experience of understanding fundamental science behind Artificial Intelligence, machine learning, novel Artificial Intelligence algorithms and architectures, software engineering principles for Artificial Intelligence, natural language processing with proficiency in programming as evident by publications in SCI journals with high impact factor. To be part a group of scientists working in the area of genomics, running the central<br />bioinformatics facility, developing independent projects and providing bioinformatics support to the user scientists of the Institute.</p>

<p>More at </p>

<p>http://14.139.62.50/CSIR-IITR%20Scientist%20Recruitment%20Adv%202020.pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43272/bioinformatics-head-bioinformatics-manager-iii-cancer-genomics-research-laboratory-at-frederick-national-laboratory</guid>
  <pubDate>Wed, 18 Aug 2021 00:19:48 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Head (Bioinformatics Manager III), Cancer Genomics Research Laboratory at  Frederick National Laboratory]]></title>
  <description><![CDATA[
<p>Frederick National Laboratory seeking an enthusiastic, creative, and seasoned bioinformatics professional to join our leadership team and direct the exceptional Bioinformatics Group at the Cancer Genomics Research Laboratory (CGR).  CGR has a diverse team of bioinformatics and computational scientists that support all areas of bioinformatics and data analysis (infrastructure, data QC, pipeline development and maintenance, data curation and sharing, methodology development, statistical analyses, machine learning approaches, and scientific interpretation).</p>

<p>More at https://leidosbiomed.csod.com/ats/careersite/jobdetails.aspx?site=4&amp;c=leidosbiomed&amp;id=2040</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44756/phd-hunt-your-gateway-to-nordic-academic-opportunities</guid>
	<pubDate>Thu, 02 Jan 2025 19:55:22 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44756/phd-hunt-your-gateway-to-nordic-academic-opportunities</link>
	<title><![CDATA[PhD Hunt: Your Gateway to Nordic Academic Opportunities]]></title>
	<description><![CDATA[<p>Embarking on a PhD journey is a transformative step in academia. To ease this transition, we brings you a curated list of top resources and institutions across Denmark, Sweden, Norway, and Finland. These links will guide you through finding opportunities and navigating the academic landscape in the Nordic region.</p><p><strong>PhD Opportunities in Denmark Denmark boasts a robust academic infrastructure with world-class universities. Here are some essential resources:</strong></p><p>Study in Denmark: <a>https://studyindenmark.dk</a></p><p>Aarhus University: <a>https://phd.au.dk</a></p><p>Euraxess Denmark: <a>https://euraxess.dk</a></p><p>Technical University of Denmark (DTU): <a>https://dtu.dk</a></p><p>University of Copenhagen: <a>https://phd.ku.dk</a></p><p>Copenhagen Business School: <a>https://cbs.dk</a></p><p>Jobindex: <a>https://jobindex.dk</a></p><p>Roskilde University: <a>https://ruc.dk</a></p><p>University of Southern Denmark: <a>https://sdu.dk</a></p><p>Academic Positions Denmark: <a>https://academicpositions.dk</a></p><p><strong>PhD Opportunities in Sweden Sweden is renowned for its innovation-driven academic culture. Here&rsquo;s where you can find opportunities:</strong></p><p>FindAPhD Sweden: <a>https://findaphd.com/phds/sweden</a></p><p>Euraxess Sweden: <a>https://euraxess.se</a></p><p>Academic Positions Sweden: <a>https://academicpositions.se</a></p><p>KTH Royal Institute of Technology: <a>https://kth.se</a></p><p>Lund University: <a>https://lu.se</a></p><p>Uppsala University: <a>https://uu.se</a></p><p>Chalmers University of Technology: <a>https://chalmers.se</a></p><p>Link&ouml;ping University: <a>https://liu.se</a></p><p>Stockholm University: <a>https://su.se</a></p><p>Swedish University of Agricultural Sciences (SLU): <a>https://slu.se</a></p><p>Study in Sweden: <a>https://studyinsweden.se</a></p><p>Malm&ouml; University: <a>https://mau.se</a></p><p><strong>PhD Opportunities in Norway Norway offers unique research opportunities, complemented by its stunning natural landscapes:</strong></p><p>JobbNorge: <a>https://jobbnorge.no</a></p><p>Euraxess Norway: <a>https://euraxess.no</a></p><p>University of Oslo: <a>https://uio.no</a></p><p>Norwegian University of Science and Technology (NTNU): <a>https://ntnu.edu</a></p><p>Norwegian Business School (BI): <a>https://bi.edu</a></p><p>Norwegian School of Economics: <a>https://nhh.no</a></p><p>Norwegian University of Life Sciences (NMBU): <a>https://nmbu.no</a></p><p>Norwegian School of Sport Sciences: <a>https://nih.no</a></p><p>University of Bergen: <a>https://uib.no</a></p><p>Nord University: <a>https://nord.no</a></p><p>UiT The Arctic University of Norway: <a>https://uit.no</a></p><p><strong>PhD Opportunities in Finland Finland&rsquo;s education system emphasizes research excellence and innovation. Explore these resources</strong>:</p><p>FindAPhD Finland: <a>https://findaphd.com/phds/finland</a></p><p>Euraxess Finland: <a>https://euraxess.fi</a></p><p>University of Helsinki: <a>https://helsinki.fi</a></p><p>Aalto University: <a>https://aalto.fi</a></p><p>University of Turku: <a>https://utu.fi</a></p><p>Tampere University: <a>https://tuni.fi</a></p><p>University of Eastern Finland: <a>https://uef.fi</a></p><p>University of Jyv&auml;skyl&auml;: <a>https://jyu.fi</a></p><p>&Aring;bo Akademi University: <a>https://abo.fi</a></p><p>Hanken School of Economics: <a>https://hanken.fi</a></p><p>LUT University: <a>https://lut.fi</a></p><p>Conclusion The Nordic countries offer exceptional opportunities for PhD aspirants. From top-ranked universities to specialized research institutions, the possibilities are endless. Bookmark PhD Hut as your starting point, and let these resources guide you to your academic aspirations.</p>]]></description>
	<dc:creator>LEGE</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/34912/list-of-cancer-genomics-research-web-resources</guid>
	<pubDate>Wed, 27 Dec 2017 20:33:09 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/34912/list-of-cancer-genomics-research-web-resources</link>
	<title><![CDATA[List of cancer genomics research web resources !]]></title>
	<description><![CDATA[<p>Major web resources for cancer genomics research</p><p>CGHub <br />https://cghub.ucsc.edu/ <br />Comprehensive data repository; huge data size</p><p>EGA <br />https://www.ebi.ac.uk/ega/ <br />Comprehensive data repository; huge data size</p><p>COSMIC <br />http://cancer.sanger.ac.uk <br />Largest somatic mutation database; genome sequencing paper curation</p><p>CPRG <br />http://www.broadinstitute.org/software/cprg <br />Interface for cancer program resources</p><p>GDAC <br />http://gdac.broadinstitute.org/ <br />Data analysis; automatic pipelines; user-friendly reports</p><p>SNP500Cancer <br />http://snp500cancer.nci.nih.gov <br />Sequence and genotype verification of SNPs</p><p>canEvolve <br />www.canevolve.org/ <br />Comprehensive analysis of tumor profile; Data from 90 studies involving more than 10,000 patients</p><p>MethyCancer <br />http://methycancer.psych.ac.cn <br />Relationship among DNA methylation, gene expression and cancer</p><p>SomamiR <br />http://compbio.uthsc.edu/SomamiR/ <br />Correlation between somatic mutation and microRNA; genome-wide displaying</p><p>cBioPortal <br />http://www.cbioportal.org/public-portal/ <br />Graphical summaries; gene alteration; processed data; visualization</p><p>UCSC Cancer Genomics Browser <br />https://genome-cancer.soe.ucsc.edu/ <br />Clinical information; gene expression; copy number variation; visualization</p><p>CGWB <br />https://cgwb.nci.nih.gov/ <br />Visualization; gene mutation and variation; automated analysis pipeline</p><p>GDSC <br />http://www.cancerrxgene.org <br />Drug sensitivity information; drug response information</p><p>canSAR <br />https://cansar.icr.ac.uk/ <br />Multidisciplinary information; drug discovery</p><p>NONCODE <br />http://www.noncode.org/ ncRNAs; <br />lncRNAs; up-to-date and comprehensive resource</p>]]></description>
	<dc:creator>biogeek</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/40882/troyanskaya-lab</guid>
  <pubDate>Tue, 04 Feb 2020 06:40:36 -0600</pubDate>
  <link></link>
  <title><![CDATA[Troyanskaya Lab]]></title>
  <description><![CDATA[
<p>The goal of our research is to interpret and distill this complexity through accurate analysis and modeling of molecular pathways, particularly those in which malfunctions lead to the manifestation of disease. We are inventing integrative methods for systems-level pathway modeling through integrative analysis of genome-scale datasets. We apply these approaches in studying challenging biological problems, such as how pathways function in diverse cell types and how they change dynamically.</p>

<p>https://function.princeton.edu/</p>
]]></description>
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