<![CDATA[BOL: Related items]]> https://bioinformaticsonline.com/related/42974?offset=1400 https://bioinformaticsonline.com/bookmarks/view/27440/stampy Fri, 20 May 2016 19:13:32 -0500 https://bioinformaticsonline.com/bookmarks/view/27440/stampy <![CDATA[Stampy]]> Stampy is a package for the mapping of short reads from illumina sequencing machines onto a reference genome. It's recommended for most workflows, including those for genomic resequencing, RNA-Seq and Chip-seq. Stampy excels in the mapping of reads containing that contain sequence variation relative to the reference, in particular for those containing insertions or deletions.

Address of the bookmark: http://www.well.ox.ac.uk/project-stampy

]]> Abhi https://bioinformaticsonline.com/bookmarks/view/27461/maftools Sat, 21 May 2016 22:40:21 -0500 https://bioinformaticsonline.com/bookmarks/view/27461/maftools <![CDATA[mafTools]]> Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.

Address of the bookmark: https://github.com/dentearl/mafTools

]]> Radha Agarkar