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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/43643?offset=0</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41886/coronavirus-sars-cov-2</guid>
	<pubDate>Wed, 17 Jun 2020 11:18:24 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41886/coronavirus-sars-cov-2</link>
	<title><![CDATA[Coronavirus SARS-CoV-2]]></title>
	<description><![CDATA[<p><span>Used Nanographics Vj, our real-time molecular visualization and animation software, to create this video showing the structure of the virus. In the video, you can see the latest theory on how the RNA is organized inside of the virus particle.</span></p>
<p><span><span>On this page, you can download&nbsp;</span><a href="https://nanographics.at/projects/sars-cov-2/sars-cov-2-renders.zip">high resolution images</a><span>&nbsp;of our renderings. We made them with transparent background, so that you can use it in your work. As the research progresses, we will keep updating the model as well as the images on this page, so stay tuned!</span></span></p>
<p>&nbsp;</p><p>Address of the bookmark: <a href="https://nanographics.at/projects/sars-cov-2/" rel="nofollow">https://nanographics.at/projects/sars-cov-2/</a></p>]]></description>
	<dc:creator>Shruti Paniwala</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43645/corona-virus-genome-and-data-download</guid>
	<pubDate>Sun, 12 Dec 2021 23:34:54 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43645/corona-virus-genome-and-data-download</link>
	<title><![CDATA[Corona Virus Genome and Data Download !]]></title>
	<description><![CDATA[<p>Genes and its related metadata could be found on&nbsp;https://www.ncbi.nlm.nih.gov/datasets/coronavirus/genomes/</p><p>Address of the bookmark: <a href="https://www.ncbi.nlm.nih.gov/datasets/coronavirus/genomes/" rel="nofollow">https://www.ncbi.nlm.nih.gov/datasets/coronavirus/genomes/</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41493/coronavirus-resources</guid>
	<pubDate>Wed, 25 Mar 2020 17:11:33 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41493/coronavirus-resources</link>
	<title><![CDATA[Coronavirus Resources !]]></title>
	<description><![CDATA[<p><span>2019nCoVR features comprehensive integration of genomic and proteomic sequences as well as their metadata information from the GISAID, NCBI, NMDC and CNCB/NGDC. It also incorporates a wide range of relevant information including scientific literatures, news, and popular articles for science dissemination, and provides visualization functionalities for genome variation analysis results based on all collected 2019-nCoV strains.</span></p>
<p><span>Annotation</span></p>
<p><span><a href="https://bigd.big.ac.cn/ncov/variation/annotation">https://bigd.big.ac.cn/ncov/variation/annotation</a></span></p>
<p><span>Genome wharehouse&nbsp;</span></p>
<p><span><a href="https://bigd.big.ac.cn/gwh/browse/index">https://bigd.big.ac.cn/gwh/browse/index</a></span></p>
<p>Released Genome</p>
<p><a href="https://bigd.big.ac.cn/ncov/release_genome">https://bigd.big.ac.cn/ncov/release_genome</a></p>
<p>Download data&nbsp;</p>
<p><a href="ftp://download.big.ac.cn/Genome/Viruses/Coronaviridae/">ftp://download.big.ac.cn/Genome/Viruses/Coronaviridae/</a></p>
<p>Raw data</p>
<p><a href="https://bigd.big.ac.cn/gsa/browse/run/?tag=Coronaviridae">https://bigd.big.ac.cn/gsa/browse/run/?tag=Coronaviridae</a></p><p>Address of the bookmark: <a href="https://bigd.big.ac.cn/ncov/about" rel="nofollow">https://bigd.big.ac.cn/ncov/about</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/13852/ebola-virus-disease-evdor-ebola-haemorrhagic-fever</guid>
	<pubDate>Sun, 10 Aug 2014 13:08:13 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/13852/ebola-virus-disease-evdor-ebola-haemorrhagic-fever</link>
	<title><![CDATA[Ebola virus disease (EVD)or Ebola haemorrhagic fever !!!]]></title>
	<description><![CDATA[<p>Ebola virus disease (EVD)or Ebola haemorrhagic fever is a severe and often deadly illness in humans, caused by the Ebola virus. The disease has high mortality rate, killing upto 90% of people who are infected.</p><p><img src="http://s4.reutersmedia.net/resources/r/?m=02&amp;d=20140808&amp;t=2&amp;i=959839176&amp;w=580&amp;fh=&amp;fw=&amp;ll=&amp;pl=&amp;r=LYNXMPEA770BX" width="580" height="452" alt="image" style="border: 0px;"></p><p><br />The ongoing 2014 West Africa Ebola outbreak is considered to be the largest and longest outbreak ever recorded of Ebola, killing at least 932 people and infecting more than 1,700 till date since March in Sierra Leone, Guinea, Nigeria and Liberia.<br /><br />Hence, the World Health Organisation (WHO) on 8 August, 2014 declared the killer Ebola epidemic ravaging parts of West Africa an international health emergency.<br /><br />Causes<br /><br />EVD is caused by infection with a virus of the family Filoviridae, genus Ebolavirus. While there are five identified sub-species of Ebolavirus, four viruses cause disease in humans. They are Bundibugyo virus (BDBV), Ebola virus (EBOV), Sudan virus (SUDV), Ta&iuml; Forest virus (TAFV).<br /><br />The fifth virus, Reston virus (RESTV), is not considered to be disease-causing in humans.<br /><br />According to WHO, EVD first appeared in 1976 in two simultaneous outbreaks, in Nzara, Sudan, and in Yambuku, Democratic Republic of Congo. The latter was in a village situated near the Ebola River from which the disease takes its name.</p><p>How does it spread?<br /><br />It is still unclear how Ebola spreads. However, it is believed that the first pateint becomes infected through contact with an infected animal's body fluids.<br /><br />Human-to-human transmission can occur through direct contact with blood, organs or other body fluids of infected people or exposure to objects such as needles and syringes that have been contaminated with infected secretions.<br /><br />Ebola can also be transmitted from men who have recovered from the disease through semen as it is infectious for up to 7 weeks.<br /><br />Infected dead bodies can spread Ebola as they are still infectious. So mourners who have direct contact with the body of deceased person can also get the disease.<br /><br />Who is most at risk?<br /><br />Health-care workers who do not wear appropriate protective clothing and family members who are in close contact with infected people or deceased patients.<br /><br />Signs and symptoms:<br /><br />Symptoms may occur between 2 and 21 days after contracting the infection. Common signs of Ebola include:</p><p><img src="https://scontent-b-sin.xx.fbcdn.net/hphotos-xap1/t1.0-9/p720x720/10494629_873450929332827_3274653669306581755_n.jpg" width="720" height="720" alt="image" style="border: 0px;"></p><p>Fever<br /><br />Headache<br /><br />Muscle, abdominal and joint pain<br /><br />Sore throat<br /><br />Weakness<br /><br />Diarrhea<br /><br />Vomit or cough up blood<br /><br />Chest pain<br /><br />Difficulty in breathing and swallowing<br /><br />Rash<br /><br />Hiccups<br /><br />Bleeding inside and outside the body<br /><br />Prevention<br /><br />Currently there is no vaccine available for humans. But the infection can be controlled through the use of recommended protective measures such as:<br /><br />Avoid contacting infected blood or secretions, including from those who are dead .<br /><br />Using standard precautions for all patients in the healthcare setting.<br /><br />Sterilizing equipment, and wearing protective clothing including masks, gloves, gowns and goggles.<br /><br />Washing your hands with soaps or detergents.<br /><br />Disinfecting your surroundings.<br /><br />Isolate people who have Ebola symptoms.<br /><br />Culling of infected animals, with close supervision of burial or incineration of carcasses.<br /><br />Yet, not travelling to the areas or countries where the virus is found is the best way to avoid Ebola.</p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/4100/should-you-get-sequenced-not-all-bad-genes-predict-disease</guid>
	<pubDate>Thu, 29 Aug 2013 15:10:53 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/4100/should-you-get-sequenced-not-all-bad-genes-predict-disease</link>
	<title><![CDATA[Should you get sequenced? Not all bad genes predict disease]]></title>
	<description><![CDATA[<p><span>&ldquo;What we really don&rsquo;t know yet is whether the predictive aspects of the genome are going to turn out to be beneficial or potentially harmful&rdquo;</span></p>
<p><span><span>&ldquo;As we roll out genomic medicine we are fighting against this society-wide misconception that having the bad gene means you&rsquo;re going to get the disease. That&rsquo;s only true in a very few cases.&rdquo;</span></span></p>
<p><span><span><strong>Source</strong>:Today Health</span></span></p><p>Address of the bookmark: <a href="http://www.today.com/health/should-you-get-sequenced-not-all-bad-genes-predict-disease-8C11017154" rel="nofollow">http://www.today.com/health/should-you-get-sequenced-not-all-bad-genes-predict-disease-8C11017154</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4961/genetics-epigenetics-and-disease</guid>
	<pubDate>Fri, 27 Sep 2013 11:32:55 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4961/genetics-epigenetics-and-disease</link>
	<title><![CDATA[Genetics, epigenetics and disease]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/SHpfkNRscOc" frameborder="0" allowfullscreen></iframe>Royal Society GlaxoSmithKline Prize Lecture given by Professor Adrian Bird CBE FMedSci FRS on Tuesday 22 January 2013.

Adrian Bird CBE FMedSci FRS is the Buchanan Chair of Genetics at the University of Edinburgh.

The human genome sequence has been available for more than a decade, but its significance is still not fully understood. While most human genes have been identified, there is much to learn about the DNA signals that control them. This lecture described an unusually short DNA sequence, just two base pairs long, CG, which occurs in several chemically different forms. Defects in signalling by CG are implicated in disease. For example, the autism spectrum disorder Rett syndrome is caused by loss of a protein that reads methylated CG and affects the activity of genes.

The Royal Society GlaxoSmithKline Prize Lecture is awarded for original contributions to medical and veterinary sciences published within ten years from the date of the award.]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/32379/enrichr-a-comprehensive-gene-set-enrichment-analysis</guid>
	<pubDate>Thu, 27 Apr 2017 05:42:09 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/32379/enrichr-a-comprehensive-gene-set-enrichment-analysis</link>
	<title><![CDATA[Enrichr: a comprehensive gene set enrichment analysis]]></title>
	<description><![CDATA[<p><span>Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and download. In total, Enrichr currently contains 180 184 annotated gene sets from 102 gene set libraries. New features have been added to Enrichr including the ability to submit fuzzy sets, upload BED files, improved application programming interface and visualization of the results as clustergrams. Overall, Enrichr is a comprehensive resource for curated gene sets and a search engine that accumulates biological knowledge for further biological discoveries. Enrichr is freely available at:&nbsp;</span><a href="http://amp.pharm.mssm.edu/Enrichr" target="">http://amp.pharm.mssm.edu/Enrichr</a><span>.</span></p>
<p>https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw377</p><p>Address of the bookmark: <a href="http://amp.pharm.mssm.edu/Enrichr/" rel="nofollow">http://amp.pharm.mssm.edu/Enrichr/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/2756/flu-attack-how-a-virus-invades-your-body</guid>
	<pubDate>Thu, 22 Aug 2013 08:09:51 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/2756/flu-attack-how-a-virus-invades-your-body</link>
	<title><![CDATA[Flu Attack! How A Virus Invades Your Body]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/Rpj0emEGShQ" frameborder="0" allowfullscreen></iframe>When you get the flu, viruses turn your cells into tiny factories that help spread the disease. In this animation, NPR's Robert Krulwich and medical animator David Bolinsky explain how a flu virus can trick a single cell into making a million more viruses.

See and hear the rest of the story on NPR.org: http://www.npr.org/templates/story/story.php?storyId=114075029

Credit: Robert Krulwich, David Bolinsky, Jason Orfanon]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/38226/ncbi-to-assist-in-virus-hunting-data-science-hackathon</guid>
	<pubDate>Thu, 15 Nov 2018 12:55:01 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/38226/ncbi-to-assist-in-virus-hunting-data-science-hackathon</link>
	<title><![CDATA[NCBI to assist in Virus Hunting Data Science Hackathon]]></title>
	<description><![CDATA[<p>NCBI Hackathon are pleased to announce the second installment of the&nbsp;<a href="https://ncbiinsights.ncbi.nlm.nih.gov/2017/11/30/ncbi-southern-california-genomics-hackathon-january/" target="_blank">SoCal Bioinformatics Hackathon</a>. From January 9-11, 2019, the&nbsp;<a href="https://www.ncbi.nlm.nih.gov/" target="_blank">NCBI</a>&nbsp;will help run a bioinformatics hackathon in Southern California hosted by the&nbsp;<a href="http://www.csrc.sdsu.edu/" target="_blank">Computational Sciences Research Center</a>&nbsp;at&nbsp;<a href="http://www.sdsu.edu/" target="_blank">San Diego State University</a>!</p><p><span>NCBI Hackathon</span>&nbsp;specifically looking for folks who have experience in computational virus hunting or adjacent fields to identify known, taxonomically-definable and novel viruses from a few hundred thousand metagenomic datasets that we&rsquo;ll put on cloud infrastructure. This event is for researchers, including students and postdocs, who are already engaged in the use of bioinformatics data or in the development of pipelines for virological analyses from high-throughput experiments. If this describes you, please&nbsp;<a href="https://goo.gl/forms/kDnSG0IAZD62XQRe2" target="_blank">apply</a>! The event is open to anyone selected for the hackathon and willing to travel to SDSU (see below).</p><p>https://ncbiinsights.ncbi.nlm.nih.gov/2018/11/09/ncbi-sdsu-virus-hunting-data-science-hackathon-january-2019/</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44173/mpxv-bookmarks</guid>
	<pubDate>Mon, 19 Dec 2022 01:58:20 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44173/mpxv-bookmarks</link>
	<title><![CDATA[MPXV Bookmarks]]></title>
	<description><![CDATA[<p>MPVX infection across the globe</p>
<p><a href="https://www.google.com/url?q=https://www.cdc.gov/poxvirus/monkeypox/response/2022/world-map.html&amp;sa=D&amp;source=docs&amp;ust=1671439883060005&amp;usg=AOvVaw39WwSqp2A5TD8KjRvaaxzW" target="_blank">https://www.cdc.gov/poxvirus/monkeypox/response/2022/world-map.html</a></p><p>Address of the bookmark: <a href="https://www.cdc.gov/poxvirus/monkeypox/response/2022/world-map.html" rel="nofollow">https://www.cdc.gov/poxvirus/monkeypox/response/2022/world-map.html</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
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