<![CDATA[BOL: Related items]]> https://bioinformaticsonline.com/related/43904?offset=90 https://bioinformaticsonline.com/bookmarks/view/39236/causel-an-epigenome-and-genome-editing-pipeline-for-establishing-function-of-noncoding-gwas-variants Tue, 09 Apr 2019 07:23:37 -0500 https://bioinformaticsonline.com/bookmarks/view/39236/causel-an-epigenome-and-genome-editing-pipeline-for-establishing-function-of-noncoding-gwas-variants <![CDATA[CAUSEL: an epigenome- and genome-editing pipeline for establishing function of noncoding GWAS variants]]> Validated a widely accessible approach that can be used to establish functional causality for noncoding sequence variants identified by GWASs.

https://www.nature.com/articles/nm.3975

Address of the bookmark: https://www.nature.com/articles/nm.3975

]]> BioJoker https://bioinformaticsonline.com/bookmarks/view/40705/malva-genotyping-by-mapping-free-allele-detection-of-known-variants Tue, 28 Jan 2020 03:39:22 -0600 https://bioinformaticsonline.com/bookmarks/view/40705/malva-genotyping-by-mapping-free-allele-detection-of-known-variants <![CDATA[MALVA: Genotyping by Mapping-free ALlele Detection of Known VAriants]]> MALVA is able to genotype multi-allelic SNPs and indels without mapping reads

MALVA calls correctly more indels than the most widely adopted genotyping pipelines

Mapping-free approaches are as accurate as alignment-based ones, while being faster

More at https://www.sciencedirect.com/science/article/pii/S2589004219302366

https://www.sciencedirect.com/science/article/pii/S2589004219302366

Address of the bookmark: https://github.com/AlgoLab/malva

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