<![CDATA[BOL: Related items]]> https://bioinformaticsonline.com/related/44179?offset=90 https://bioinformaticsonline.com/bookmarks/view/44373/mitohifi-a-python-pipeline-for-mitochondrial-genome-assembly-from-pacbio-high-fidelity-reads Tue, 05 Sep 2023 07:31:35 -0500 https://bioinformaticsonline.com/bookmarks/view/44373/mitohifi-a-python-pipeline-for-mitochondrial-genome-assembly-from-pacbio-high-fidelity-reads <![CDATA[MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads]]> MitoHiFi v3.2 is a python pipeline distributed under MIT License !

MitoHiFi was first developed to assemble the mitogenomes for a wide range of species in the Darwin Tree of Life Project (DToL)

https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-023-05385-y 

Address of the bookmark: https://github.com/marcelauliano/MitoHiFi

]]> Abhi https://bioinformaticsonline.com/bookmarks/view/27465/stand-alone-programs-for-bioinformatician Sat, 21 May 2016 22:50:15 -0500 https://bioinformaticsonline.com/bookmarks/view/27465/stand-alone-programs-for-bioinformatician <![CDATA[Stand-alone programs for Bioinformatician]]> This directory contains applications for stand-alone use, built specifically for a Linux 64-bit machine.

For help on the bigBed and bigWig applications see:
http://genome.ucsc.edu/goldenPath/help/bigBed.html
http://genome.ucsc.edu/goldenPath/help/bigWig.html

View the file 'FOOTER' to see the usage statement for each of the applications.

Address of the bookmark: http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/

]]> Radha Agarkar https://bioinformaticsonline.com/bookmarks/view/34490/collinearity-scripts-to-parse-and-analyse-mcscanx-collinearity-output Wed, 29 Nov 2017 16:47:54 -0600 https://bioinformaticsonline.com/bookmarks/view/34490/collinearity-scripts-to-parse-and-analyse-mcscanx-collinearity-output <![CDATA[collinearity: scripts to parse and analyse MCScanX collinearity output]]> scripts to parse and analyse MCScanX collinearity output

Address of the bookmark: https://github.com/reubwn/collinearity

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