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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/44279?offset=20</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/22073/bcil-bioinformatics-bitp-application</guid>
	<pubDate>Fri, 17 Apr 2015 04:34:56 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/22073/bcil-bioinformatics-bitp-application</link>
	<title><![CDATA[BCIL Bioinformatics BITP Application !!]]></title>
	<description><![CDATA[<p>BCIL Bioinformatics BITP Application Form 2015 logoGrab latest Information! Biotech Consortium India Limited has announced a notification for offering admission in Biotech Industrial Training Program. The organization has invited online application from 7th April 2015 BCIL Admission 2015. BCIL has conducted an entrance exam which is scheduled on 20th June 2015. Candidates those who are looking for this program just go for it and don&rsquo;t miss this opportunity.<br /><br />To apply for Biotech Industrial Training Programme the candidates should have 50% marks in B.Tech/BE/M.Tech Degree in Bio technology, bio process technology and other related disciplines form any recognized institution. The organization has decided application fee of Rs.500/- for all candidates and that should be paid through demand draft. Applicants who satisfy the organization requirement, they can take their steps forward.<br /><br />Candidates should submit the online application before 10th May 2015. After registering the online application you need to take the hard copy of it and send through post. Print out of this application should be reached before 15th May 2015. All the latest updates like selection process, exam syllabus and other related information are updated soon at the main URL of the department and aspirants should keep in touch with this site. Further details of BCIL Bioinformatics BITP Application Form 2015 are explained below.<br /><br />Organization: Biotech Consortium India Limited<br /><br />Website URL: www.bcil.nic.in<br /><br />Location: New Delhi<br /><br />Course Name: Biotech Industrial Training Program<br /><br />Exam Name: BCIL Entrance Exam<br /><br />Educational Details: Applicants should complete their B.Tech/M.Tech/BE programs in Neuro- Science, Agricultural, Bio technology, bio process technology and other related disciplines having 50% aggregate from any authorized university.<br /><br />Application Fee: For all candidates application fee is Rs.500/- and it will be paid through Demand Draft drawn in favour of BCIL, New Delhi.<br /><br />How to Apply: Candidates who are willing to apply for this program they can apply through online mode. Then send the hard copy of registered application form to through post.<br /><br />Important Dates<br /><br />Opening Date of Submission Online Application Form: 7h April 2015<br /><br />Closing Date of Submission of Online Application Form: 10th May 2015<br /><br />Last Date of Receipt of Application Form: 15th May 2015<br /><br />Exam Date: 20th June 2015</p><p>More at http://bcil.nic.in/default.htm</p>]]></description>
	<dc:creator>Pranjali Yadav</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/28200/machine-learning</guid>
	<pubDate>Fri, 01 Jul 2016 12:57:12 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/28200/machine-learning</link>
	<title><![CDATA[Machine Learning !!!]]></title>
	<description><![CDATA[<p>In machine learning, computers apply&nbsp;<strong>statistical learning</strong>&nbsp;techniques to automatically identify patterns in data. These techniques can be used to make highly accurate predictions.</p>
<p><em>Keep scrolling.</em>&nbsp;Using a data set about homes, we will create a machine learning model to distinguish homes in New York from homes in San Francisco.</p><p>Address of the bookmark: <a href="http://www.r2d3.us/visual-intro-to-machine-learning-part-1/" rel="nofollow">http://www.r2d3.us/visual-intro-to-machine-learning-part-1/</a></p>]]></description>
	<dc:creator>Gudiya Pal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/30364/bioinformatics-contest-2017</guid>
	<pubDate>Fri, 23 Dec 2016 14:03:37 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/30364/bioinformatics-contest-2017</link>
	<title><![CDATA[Bioinformatics Contest 2017!]]></title>
	<description><![CDATA[<p><a href="http://contest.bioinf.me" target="_blank">Bioinformatics Contest 2017</a>! Rosalind is co-organizer.<br /> Compete with thousands of people worldwide on bioinformatics problem solving.<br /> Everything is online. Qualification round starts on <strong>January 23, 2017</strong>. Final is on <span><span>Feb 18</span></span>.</p><p>You will need to solve bioinformatics problems using programming. The goal is to correctly solve as many problems as possible within 24 hours. Some of them will be approximation problems and will have partial grades. All rounds will be held online, submissions will be auto-graded in real time.</p><p>Check more at http://contest.bioinf.me/</p><p>Good luck!</p>]]></description>
	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/30538/gkno</guid>
	<pubDate>Tue, 17 Jan 2017 03:35:34 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/30538/gkno</link>
	<title><![CDATA[GKNO]]></title>
	<description><![CDATA[<p><span>gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno.</span></p>
<p><span>More at&nbsp;http://gkno.me/</span></p><p>Address of the bookmark: <a href="http://gkno.me/" rel="nofollow">http://gkno.me/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/35798/an-introduction-to-applied-bioinformatics</guid>
	<pubDate>Fri, 02 Mar 2018 04:26:38 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/35798/an-introduction-to-applied-bioinformatics</link>
	<title><![CDATA[An Introduction to Applied Bioinformatics]]></title>
	<description><![CDATA[<p>IAB is primarily being developed by&nbsp;<a href="http://caporasolab.us/people/greg-caporaso/">Greg Caporaso</a>(GitHub/Twitter:&nbsp;<a href="https://github.com/gregcaporaso">@gregcaporaso</a>) in the&nbsp;<a href="http://www.caporasolab.us/">Caporaso Lab</a>&nbsp;at&nbsp;<a href="http://www.nau.edu/">Northern Arizona University</a>. You can find information on the courses I teach on&nbsp;<a href="http://www.caporasolab.us/teaching">my teaching website</a>&nbsp;and information on my research and lab on&nbsp;<a href="http://www.caporasolab.us/">my lab website</a>.</p>
<p>&nbsp;</p><p>Address of the bookmark: <a href="http://readiab.org/" rel="nofollow">http://readiab.org/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/42810/bioinformatics-in-africa-part3-mali</guid>
	<pubDate>Sat, 06 Feb 2021 13:28:44 -0600</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/42810/bioinformatics-in-africa-part3-mali</link>
	<title><![CDATA[Bioinformatics in Africa: Part3 - Mali]]></title>
	<description><![CDATA[<p>International&nbsp;Center&nbsp;for&nbsp;Excellence&nbsp;in&nbsp;Research&nbsp;(ICER):</p><p>The&nbsp;ICER&nbsp;is&nbsp;a&nbsp;research&nbsp;center&nbsp;composed&nbsp;of&nbsp;the&nbsp;following&nbsp;three&nbsp;programs: 1. The&nbsp;Malaria&nbsp;Research&nbsp;and&nbsp;Training&nbsp;Center&nbsp;&shy;&nbsp;Parasitology&nbsp;Group,&nbsp; 2. The&nbsp;Malaria&nbsp;Research&nbsp;and&nbsp;Training&nbsp;Center&nbsp;&shy;&nbsp;Entomology&nbsp;Group&nbsp; 3. The&nbsp;SEREFO&nbsp;Group.</p><p>The&nbsp;first&nbsp;two&nbsp;programs&nbsp;develop&nbsp;biomedical&nbsp;researches&nbsp;in&nbsp;malaria,&nbsp;Filariasis&nbsp;and&nbsp;Leishmaniasis.&nbsp;The&nbsp; third&nbsp;program&nbsp;develops&nbsp;biomedical&nbsp;researches&nbsp;in&nbsp;tuberculosis&nbsp;and&nbsp;HIV.</p><p>Bioinformatics&nbsp;was&nbsp;introduced&nbsp;recently&nbsp;to&nbsp;the&nbsp;ICER&nbsp;and&nbsp;is&nbsp;constantly&nbsp;growing.&nbsp;The&nbsp;ICER&nbsp;has&nbsp;one&nbsp; team,&nbsp;headed&nbsp;by&nbsp;Sidy&nbsp;SOUMARE,&nbsp;which&nbsp;supports&nbsp;the&nbsp;three&nbsp;programmes&nbsp;in&nbsp;all&nbsp;their&nbsp;needs&nbsp;in&nbsp; informatics&nbsp;and&nbsp;bioinformatics.&nbsp;This&nbsp;team&nbsp;can&nbsp;beneficiate&nbsp;from&nbsp;some&nbsp;computational&nbsp;facilities&nbsp;(4&nbsp; blast&nbsp;servers,&nbsp;15&nbsp;other&nbsp;servers&nbsp;and&nbsp;around&nbsp;200&nbsp;terminals),&nbsp;but&nbsp;the&nbsp;ICER&nbsp;staff&nbsp;needs&nbsp;some&nbsp;training&nbsp;in&nbsp; order&nbsp;to&nbsp;be&nbsp;able&nbsp;to&nbsp;administrate&nbsp;these&nbsp;facilities.</p><p>Research&nbsp;Interest&nbsp;and&nbsp;Activities: The&nbsp;following&nbsp;are&nbsp;the&nbsp;present&nbsp;areas&nbsp;of&nbsp;research&nbsp;interest: 1. Functional&nbsp;genomics 2. Analysis&nbsp;of&nbsp;microarray&nbsp;data 3. Interaction&nbsp;between&nbsp;the&nbsp;vector&nbsp;and&nbsp;the&nbsp;parasite.</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43292/bioinformatics-scientist-production-bioinformatics-south-san-francisco-ca</guid>
  <pubDate>Thu, 19 Aug 2021 08:45:24 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Scientist, Production Bioinformatics @ South San Francisco, CA]]></title>
  <description><![CDATA[
<p>wist is looking for a Bioinformatics Scientist to join our Production Bioinformatics Team. You will work alongside research scientists, software engineers and data scientists to further deliver on our mission to expand access to best-in-class synthetic biology and next-generation sequencing applications. You will be developing and engineering tools to better evaluate and build hardened, production quality pipelines, optimize data quality, and automate lab and bioinformatics processes. Our ideal candidate is an organized problem solver with a background in developing and building novel production-quality bioinformatics tools and packages. Equally excellent communication skills and a proven ability to work independently are required.</p>

<p>More at https://boards.greenhouse.io/twistbioscience/jobs/3135495?gh_src=9ecc0b941us</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/35805/python-learning-resources-for-bioinformatics-and-computational-biologist</guid>
	<pubDate>Fri, 02 Mar 2018 06:54:15 -0600</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/35805/python-learning-resources-for-bioinformatics-and-computational-biologist</link>
	<title><![CDATA[Python learning resources for bioinformatics and computational biologist !]]></title>
	<description><![CDATA[<p>Python is a general-purpose language, which means it can be used to build just about anything, which will be made easy with the right tools/libraries.</p><p>Professionally, Python is great for backend web development, data analysis, artificial intelligence, and scientific computing. Many developers have also used Python to build productivity tools, games, and desktop apps, so there are plenty of resources to help you learn how to do those as well.</p><p>For pros and cons visit&nbsp;http://www.bestprogramminglanguagefor.me/why-learn-python and&nbsp;http://bioinformaticsonline.com/discussion/view/459/python-vs-perl</p><p>More resources at&nbsp;https://github.com/CodementorIO/Python-Learning-Resources</p><p>Following are the list of useful python programming resources:</p><ul>
<li><a href="http://www.oreilly.com/programming/free/20-python-libraries-you-arent-using-but-should.csp">20 Python Libraries You Aren't Using (But Should)</a>&nbsp;<em>(Just fill the fields with any values)</em></li>
<li><a href="https://en.wikibooks.org/wiki/A_Beginner%27s_Python_Tutorial">A Beginner's Python Tutorial</a></li>
<li><a href="https://python.swaroopch.com/">A Byte of Python</a>&nbsp;(3.x) (HTML, PDF, EPUB, Mobi)</li>
<li><a href="https://github.com/RafeKettler/magicmethods">A Guide to Python's Magic Methods</a>&nbsp;- Rafe Kettler</li>
<li><a href="http://www.oreilly.com/programming/free/files/a-whirlwind-tour-of-python.pdf">A Whirlwind Tour of Python</a>&nbsp;- Jake VanderPlas (PDF)&nbsp;<a href="http://www.oreilly.com/programming/free/a-whirlwind-tour-of-python.csp?download=yes">(EPUB, MOBI)</a></li>
<li><a href="http://automatetheboringstuff.com/chapter0/">Automate the Boring Stuff</a>&nbsp;- Al Sweigart</li>
<li><a href="http://biopython.org/DIST/docs/tutorial/Tutorial.pdf">Biopython</a>&nbsp;(PDF)</li>
<li><a href="http://github.com/thewhitetulip/build-app-with-python-antitextbook">Build applications in Python the antitextbook</a>&nbsp;(3.x) (HTML, PDF, EPUB, Mobi)</li>
<li><a href="https://www.packtpub.com/packt/free-ebook/python-machine-learning-algorithms">Building Machine Learning Systems with Python</a>&nbsp;- Willi Richert &amp; Luis Pedro Coelho, Packt.&nbsp;<em>(Just fill the fields with any values)</em></li>
<li><a href="http://www.itmaybeahack.com/book/oodesign-python-2.1/latex/BuildingSkillsinOODesign.pdf">Building Skills in Object-Oriented Design (Python)</a>&nbsp;(PDF) (2.1.1)</li>
<li><a href="http://www.itmaybeahack.com/book/python-2.6/latex/BuildingSkillsinPython.pdf">Building Skills in Python</a>&nbsp;(PDF) (2.6)</li>
<li><a href="http://python.net/~goodger/projects/pycon/2007/idiomatic/handout.html">Code Like a Pythonista: Idiomatic Python</a></li>
<li><a href="https://www.codecademy.com/learn/python">CodeCademy Python</a></li>
<li><a href="http://composingprograms.com/">Composing Programs</a>&nbsp;(3.x)</li>
<li><a href="https://web.archive.org/web/20161016153130/http://www.brpreiss.com/books/opus7/html/book.html">Data Structures and Algorithms in Python</a>&nbsp;- B. R. Preiss (PDF)</li>
<li><a href="http://getpython3.com/diveintopython3/">Dive into Python 3</a>&nbsp;- Mark Pilgrim (3.0)
<ul>
<li><a href="http://www.diveintopython.net/">Dive into Python</a>&nbsp;- Mark Pilgrim (2.3)</li>
</ul>
</li>
<li><a href="http://www.labri.fr/perso/nrougier/from-python-to-numpy/">From Python to NumPy</a></li>
<li><a href="http://www.fullstackpython.com/">Full Stack Python</a></li>
<li><a href="http://www.oreilly.com/programming/free/functional-programming-python.csp">Functional Programming in Python</a>&nbsp;<em>(Just fill the fields with any values)</em></li>
<li><a href="http://python.cs.southern.edu/pythonbook/pythonbook.pdf">Fundamentals of Python Programming</a>&nbsp;- Richard L. Halterman (PDF) (3.2)</li>
<li><a href="https://developers.google.com/edu/python/">Google's Python Class</a>&nbsp;(2.4 - 2.x)</li>
<li><a href="https://google.github.io/styleguide/pyguide.html">Google's Python Style Guide</a></li>
<li><a href="http://inventwithpython.com/hacking/chapters/">Hacking Secret Cyphers with Python</a>&nbsp;- Al Sweigart (3.3)</li>
<li><a href="http://www.oreilly.com/programming/free/hadoop-with-python.csp">Hadoop with Python</a>&nbsp;<em>(Just fill the fields with any values)</em></li>
<li><a href="http://ianozsvald.com/HighPerformancePythonfromTrainingatEuroPython2011_v0.2.pdf">High Performance Python</a>&nbsp;(PDF)</li>
<li><a href="http://docs.python-guide.org/en/latest/">Hitchhiker's Guide to Python!</a>&nbsp;(2.6)</li>
<li><a href="http://www.oreilly.com/programming/free/files/how-to-make-mistakes-in-python.pdf">How to Make Mistakes in Python</a>&nbsp;- Mike Pirnat (PDF) (1st edition)</li>
<li><a href="http://interactivepython.org/courselib/static/thinkcspy/index.html">How to Think Like a Computer Scientist: Learning with Python, Interactive Edition</a>&nbsp;(3.2)
<ul>
<li><a href="http://www.greenteapress.com/thinkpython/thinkCSpy/">How to Think Like a Computer Scientist: Learning with Python</a>&nbsp;- Allen B. Downey, Jeff Elkner and Chris Meyers (2.4)</li>
<li><a href="http://www.greenteapress.com/thinkpython/">Think Python</a>&nbsp;- Allen B. Downey (2.x &amp; 3.0)</li>
</ul>
</li>
<li><a href="http://book.pythontips.com/en/latest/index.html">Intermediate Python</a>&nbsp;- Muhammad Yasoob Ullah Khalid (1st edition)</li>
<li><a href="http://opentechschool.github.io/python-beginners/en/">Introduction to Programming with Python</a>&nbsp;(3.3)
<ul>
<li><a href="http://python-ebook.blogspot.co.uk/">Introduction to Programming Using Python</a>&nbsp;- Cody Jackson (1st edition) (2.3)</li>
</ul>
</li>
<li><a href="http://kracekumar.com/post/71171551647/introduction-to-python">Introduction to Python</a>&nbsp;- Kracekumar (2.7.3)</li>
<li><a href="http://inventwithpython.com/chapters/">Invent Your Own Computer Games With Python</a>&nbsp;- Al Sweigart (3.1)</li>
<li><a href="http://learnpythonbreakpython.com/">Learn Python, Break Python</a></li>
<li><a href="https://learnxinyminutes.com/docs/python/">Learn Python in Y minutes</a></li>
<li><a href="http://learnpythonthehardway.org/book/">Learn Python The Hard Way</a>&nbsp;(2.5 - 2.6)</li>
<li><a href="https://www.ida.liu.se/~732A47/literature/PythonBook.pdf">Learn to Program Using Python</a>&nbsp;- Cody Jackson (PDF)</li>
<li><a href="https://www.packtpub.com/packt/free-ebook/learning-python">Learning Python</a>&nbsp;- Fabrizio Romano, Packt.&nbsp;<em>(Just fill the fields with any values)</em></li>
<li><a href="http://www.alan-g.me.uk/">Learning to Program</a></li>
<li><a href="https://github.com/jrjohansson/scientific-python-lectures">Lectures on scientific computing with python</a>&nbsp;- J.R. Johansson (2.7)</li>
<li><a href="http://inventwithpython.com/pygame/chapters/">Making Games with Python &amp; Pygame</a>&nbsp;- Al Sweigart (2.7)</li>
<li><a href="http://www.clips.ua.ac.be/sites/default/files/modeling-creativity.pdf">Modeling Creativity: Case Studies in Python</a>&nbsp;- Tom D. De Smedt (PDF)</li>
<li><a href="http://www.nltk.org/book/">Natural Language Processing with Python</a>&nbsp;(3.x)</li>
<li><a href="https://en.wikibooks.org/wiki/Non-Programmer%27s_Tutorial_for_Python_3">Non-Programmer's Tutorial for Python 3</a>&nbsp;(3.3)
<ul>
<li><a href="https://en.wikibooks.org/wiki/Non-Programmer%27s_Tutorial_for_Python_2.6">Non-Programmer's Tutorial for Python 2.6</a>&nbsp;(2.6)</li>
</ul>
</li>
<li><a href="http://www.oreilly.com/programming/free/from-future-import-python.csp">Picking a Python Version: A Manifesto</a>&nbsp;<em>(Just fill the fields with any values)</em></li>
<li><a href="http://python3porting.com/">Porting to Python 3: An In-Depth Guide</a>&nbsp;(2.6 - 2.x &amp; 3.1 - 3.x)</li>
<li><a href="https://launchpadlibrarian.net/165489933/PracticalProgrammingPython2014.pdf">Practical Programming in Python</a>&nbsp;- Jeffrey Elkner (PDF)</li>
<li><a href="http://interactivepython.org/runestone/static/pythonds/index.html">Problem Solving with Algorithms and Data Structures using Python</a>&nbsp;- Bradley N. Miller and David L. Ranum</li>
<li><a href="http://programarcadegames.com/">Program Arcade Games With Python And Pygame</a>&nbsp;(3.3)</li>
<li><a href="http://programmingcomputervision.com/downloads/ProgrammingComputerVision_CCdraft.pdf">Programming Computer Vision with Python</a>&nbsp;(PDF)</li>
<li><a href="https://docs.python.org/2/download.html">Python 2 Official Documentation</a>&nbsp;(PDF, HTML, TEXT) (2.x)</li>
<li><a href="http://infohost.nmt.edu/tcc/help/pubs/python/web/">Python 2.7 quick reference</a>&nbsp;- New Mexico Tech (2.7)</li>
<li><a href="https://docs.python.org/3/download.html">Python 3 Official Documentation</a>&nbsp;(PDF, EPUB, HTML, TEXT) (3.x)</li>
<li><a href="http://chimera.labs.oreilly.com/books/1230000000393/index.html">Python Cookbook</a>&nbsp;- David Beazley</li>
<li><a href="https://github.com/jakevdp/PythonDataScienceHandbook">Python Data Science Handbook</a>&nbsp;- Jake VanderPlas (HTML, Jupyter Notebooks)</li>
<li><a href="http://www.kevinsheppard.com/images/0/09/Python_introduction.pdf">Python for Econometrics</a>&nbsp;- Kevin Sheppard (PDF) (2.7.5)</li>
<li><a href="http://py4e.com/book.php">Python for Everybody Exploring Data Using Python 3</a>&nbsp;- Charles Severance (PDF, EPUB, HTML)
<ul>
<li><a href="http://www.pythonlearn.com/book.php">Python for Informatics: Exploring Information</a>&nbsp;(2.7.5)</li>
</ul>
</li>
<li><a href="http://pymbook.readthedocs.org/en/latest/">Python for you and me</a>&nbsp;(2.7.3)</li>
<li><a href="http://pymbook.readthedocs.org/en/py3/">Python for you and me</a>&nbsp;(3.x)</li>
<li><a href="http://safehammad.com/downloads/python-idioms-2014-01-16.pdf">Python Idioms</a>&nbsp;(PDF)</li>
<li><a href="http://www.oreilly.com/programming/free/python-in-education.csp">Python in Education</a>&nbsp;<em>(Just fill the fields with any values)</em></li>
<li><a href="http://www.greenteapress.com/pythonhydro/pythonhydro.html">Python in Hydrology</a>&nbsp;- Sat Kumar Tomer</li>
<li><a href="https://github.com/gregmalcolm/python_koans">Python Koans</a>&nbsp;(2.7 or 3.x)</li>
<li><a href="https://pymotw.com/3/">Python Module of the Week</a>&nbsp;(3.x)
<ul>
<li><a href="https://pymotw.com/2/">Python Module of the Week</a>&nbsp;(2.x)</li>
</ul>
</li>
<li><a href="http://books.goalkicker.com/PythonBook/">Python Notes for Professionals</a>&nbsp;- Compiled from StackOverflow documentation (3.x)</li>
<li><a href="http://anandology.com/python-practice-book/index.html">Python Practice Book</a>&nbsp;(2.7.1)</li>
<li><a href="http://pythonpracticeprojects.com/">Python Practice Projects</a></li>
<li><a href="https://upload.wikimedia.org/wikipedia/commons/9/91/Python_Programming.pdf">Python Programming</a>&nbsp;(PDF) (2.6)</li>
<li><a href="http://scipy-lectures.github.io/">Scipy Lecture Notes</a></li>
<li><a href="http://www-inst.eecs.berkeley.edu/~cs61a/sp12/book/">SICP in Python</a>&nbsp;(3.2)</li>
<li><a href="http://www.briggs.net.nz/snake-wrangling-for-kids.html">Snake Wrangling For Kids</a>&nbsp;(3.x)</li>
<li><a href="http://python3porting.com/">Suporting Python 3: An In-Depth Guide</a>&nbsp;(2.6 - 2.x &amp; 3.1 - 3.x)</li>
<li><a href="http://chimera.labs.oreilly.com/books/1234000000754/index.html">Test-Driven Web Development with Python</a>&nbsp;(3.3 - 3.x)</li>
<li><a href="http://gnosis.cx/TPiP/">Text Processing in Python</a>&nbsp;- David Mertz (2.3 - 2.x)</li>
<li><a href="http://www.spronck.net/pythonbook/">The Coder's Apprentice: Learning Programming with Python 3</a>&nbsp;- Pieter Spronck (PDF) (3.x)</li>
<li><a href="http://www.jython.org/jythonbook/en/1.0">The Definitive Guide to Jython, Python for the Java Platform</a>&nbsp;- Josh Juneau, Jim Baker, Victor Ng, Leo Soto, Frank Wierzbicki (2.5)</li>
<li><a href="http://docs.quantifiedcode.com/python-anti-patterns/">The Little Book of Python Anti-Patterns</a>&nbsp;(<a href="https://github.com/quantifiedcode/python-anti-patterns">Source</a>)</li>
<li><a href="http://niche-canada.org/research/niche-digital-infrastructure-project/the-programming-historian/">The Programming Historian</a>&nbsp;- William J. Turkel, Adam Crymble and Alan MacEachern</li>
<li><a href="http://mirnazim.org/writings/python-ecosystem-introduction/">The Python Ecosystem: An Introduction</a></li>
<li><a href="http://python-gtk-3-tutorial.readthedocs.org/en/latest/">The Python GTK+ 3 Tutorial</a></li>
<li><a href="http://effbot.org/librarybook/">The Standard Python Library</a>&nbsp;- Fredrik Lundh</li>
<li><a href="http://greenteapress.com/complexity/">Think Complexity</a>&nbsp;- Allen B. Downey (2nd Edition) (PDF, HTML)</li>
<li><a href="http://web2py.com/book">Web2py: Complete Reference Manual, 6th Edition (pre-release)</a>&nbsp;(2.5 - 2.x)</li>
<li><a href="https://en.wikibooks.org/wiki/Python_Programming">Wikibooks: Python Programming</a>&nbsp;(2.7)</li>
</ul>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/36603/learning-python-programming-a-bioinformatician-perspective</guid>
	<pubDate>Mon, 14 May 2018 16:33:03 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/36603/learning-python-programming-a-bioinformatician-perspective</link>
	<title><![CDATA[Learning Python Programming - a bioinformatician perspective !]]></title>
	<description><![CDATA[<p>Python Programming&nbsp;is a general purpose programming language that is open source, flexible, powerful and easy to use. One of the most important features of python is its rich set of utilities and libraries for data processing and analytics tasks. In the current era of big biological data, python and biopython is getting more popularity due to its easy-to-use features which supports big data processing.</p><p>In this tutorial series article, I will explore features and packages of python which are widely used in the big data, NGS, and bioinformatics. I will also walk through a real biological example which shows NGS data processing with the help of python packages and programming.</p><p>Python has a couple of points to recommend it to biologists and scientists specifically:</p><ul>
<li>It's widely used in the scientific community</li>
<li>It has a couple of very well designed libraries for doing complex scientific computing (although we won't encounter them in this book)</li>
<li>It lend itself well to being integrated with other, existing tools</li>
<li>It has features which make it easy to manipulate strings of characters (for example, strings of DNA bases and protein amino acid residues, which we as biologists are particularly fond of)</li>
</ul><p>In general, following are some of the important features of python which makes it a perfect fit for rapid application development.</p><ul>
<li>Python is interpreted language so the program does not need to be compiled. Interpreter parses the program code and generates the output.</li>
<li>Python is dynamically typed, so the variables types are defined automatically.</li>
<li>Python is strongly typed. So the developers need to cast the type manually.</li>
<li>Less code and more use makes it more acceptable.</li>
<li>Python is portable, extendable and scalable.</li>
</ul><p>There are two major Python versions, Python 2 and Python 3. Python 2 and 3 are quite different. This tutorial uses Python 3, because it more semantically correct and supports newer features.</p><p>I will post tutorial on daily basis on this page. Check the sub-pages on right side.</p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44601/free-resources-to-learn-statistics</guid>
	<pubDate>Sat, 06 Jul 2024 10:30:50 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44601/free-resources-to-learn-statistics</link>
	<title><![CDATA[Free resources to learn statistics]]></title>
	<description><![CDATA[<p><span>Welcome to the course notes for&nbsp;</span><span>STAT 414: Introduction to Probability Theory</span><span>. These notes are designed and developed by Penn State's&nbsp;</span><a href="https://science.psu.edu/stat">Department of Statistics</a><span>&nbsp;and offered as open educational resources. These notes are free to use under Creative Commons license&nbsp;</span><a href="https://creativecommons.org/licenses/by-nc/4.0/">CC BY-NC 4.0</a><span>.</span></p>
<p>&nbsp;</p>
<p>A free online version of the second edition of the book based on Stat 110,&nbsp;<em>Introduction to Probability</em>&nbsp;by Joe Blitzstein and Jessica Hwang,&nbsp;is now available at&nbsp;<a href="http://probabilitybook.net/" title="http://probabilitybook.net">http://probabilitybook.net</a></p>
<p>Print copies are available via&nbsp;<a href="https://www.crcpress.com/Introduction-to-Probability-Second-Edition/Blitzstein-Hwang/p/book/9781138369917" title="">CRC Press</a>,&nbsp;<a href="https://amzn.to/2Ubh7D8" title="">Amazon</a>, and elsewhere.&nbsp;</p>
<p>Stat110x is also available as an&nbsp;edX course.&nbsp;Free signup at&nbsp;<a href="https://www.edx.org/course/introduction-to-probability-0" title="https://www.edx.org/course/introduction-to-probability-0">https://www.edx.org/course/introduction-to-probability-0</a></p>
<p>The edX course focuses on animations, interactive features, readings, and problem-solving, and&nbsp;is&nbsp;<strong>complementary</strong>&nbsp;to the Stat 110 lecture videos on YouTube, which are available at&nbsp;<a href="https://goo.gl/i7njSb" title="https://goo.gl/i7njSb">https://goo.gl/i7njSb</a></p>
<p>The Stat110x animations are available within the course and at&nbsp;<a href="https://goo.gl/g7pqTo" title="">https://goo.gl/g7pqTo</a></p>
<p><a href="https://projects.iq.harvard.edu/stat110/home">https://projects.iq.harvard.edu/stat110/home</a>&nbsp;</p><p>Address of the bookmark: <a href="https://online.stat.psu.edu/stat414/" rel="nofollow">https://online.stat.psu.edu/stat414/</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
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