<![CDATA[BOL: Related items]]> https://bioinformaticsonline.com/related/44614?offset=90 https://bioinformaticsonline.com/blog/view/43008/list-of-useful-machine-ai-learning-resources Tue, 30 Mar 2021 08:56:06 -0500 https://bioinformaticsonline.com/blog/view/43008/list-of-useful-machine-ai-learning-resources <![CDATA[List of useful machine / ai learning resources !]]> ML cheatsheet !

https://github.com/remicnrd/ml_cheatsheet

Visual AI / ML

https://setosa.io/ev/

Simple and efficient tools for predictive data analysis

https://scikit-learn.org/stable/

]]> Rahul Nayak https://bioinformaticsonline.com/bookmarks/view/43563/apache-server-setting Fri, 29 Oct 2021 04:29:51 -0500 https://bioinformaticsonline.com/bookmarks/view/43563/apache-server-setting <![CDATA[Apache server setting !]]> Apache is an open source web server that’s available for Linux servers free of charge.

In this tutorial we’ll be going through the steps of setting up an Apache server.

What you’ll learn

  • How to set up Apache
  • Some basic Apache configuration

Address of the bookmark: https://ubuntu.com/tutorials/install-and-configure-apache#3-creating-your-own-website

]]> Abhi https://bioinformaticsonline.com/bookmarks/view/44543/seeing-theory-and-learn Tue, 04 Jun 2024 00:31:54 -0500 https://bioinformaticsonline.com/bookmarks/view/44543/seeing-theory-and-learn <![CDATA[Seeing Theory and Learn]]> Seeing Theory was created by Daniel Kunin while an undergraduate at Brown University. The goal of this website is to make statistics more accessible through interactive visualizations (designed using Mike Bostock’s JavaScript library D3.js).

Address of the bookmark: https://seeing-theory.brown.edu/

]]> LEGE https://bioinformaticsonline.com/bookmarks/view/44622/variant-calling-resequencing-based-genome-inference Wed, 31 Jul 2024 02:02:24 -0500 https://bioinformaticsonline.com/bookmarks/view/44622/variant-calling-resequencing-based-genome-inference <![CDATA[Variant Calling Resequencing-Based Genome Inference]]> Variant Calling - Resequencing-Based Genome Inference

Erik Garrison
University of Tennessee Health Science Center
Workshop on Genomics - Český Krumlov
January 12, 2024

https://evomics.org/wp-content/uploads/2024/01/Variant-calling-Workshop-on-Genomics-2024-Cesky-Krumlov.pdf

Address of the bookmark: https://evomics.org/wp-content/uploads/2024/01/Variant-calling-Workshop-on-Genomics-2024-Cesky-Krumlov.pdf

]]> Abhi https://bioinformaticsonline.com/bookmarks/view/40754/understanding-your-reads-and-mapping Wed, 29 Jan 2020 06:29:55 -0600 https://bioinformaticsonline.com/bookmarks/view/40754/understanding-your-reads-and-mapping <![CDATA[Understanding your reads and mapping !]]> One of the best tutorial for beginners ...

https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2017/Day1/Session4-seqIntro.html

Address of the bookmark: https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2017/Day1/Session4-seqIntro.html

]]> Neel https://bioinformaticsonline.com/bookmarks/view/43552/understanding-pango-networks Sat, 16 Oct 2021 14:02:36 -0500 https://bioinformaticsonline.com/bookmarks/view/43552/understanding-pango-networks <![CDATA[Understanding pango networks !]]> In the vast majority of instances it is expected that Pango lineage names and designations will conform to the following rules. These rules also act as guidelines for the decisions made by the Lineage Designation Committee.

https://www.pango.network/the-pango-nomenclature-system/statement-of-nomenclature-rules/

https://www.pango.network/how-does-the-system-work/what-are-pango-lineages/

Reference paper

https://www.nature.com/articles/s41564-020-0770-5

Address of the bookmark: https://www.pango.network/the-pango-nomenclature-system/statement-of-nomenclature-rules/

]]> Abhi https://bioinformaticsonline.com/bookmarks/view/44279/bioinformatics-training-material Sat, 18 Mar 2023 11:26:18 -0500 https://bioinformaticsonline.com/bookmarks/view/44279/bioinformatics-training-material <![CDATA[Bioinformatics Training Material !]]> Glittr is a curated list of bioinformatics training material.
All material is:

  • In a GitHub or GitLab repository
  • Free to use
  • Written in markdown or similar

NOTE: This list of courses is selected only based on the above criteria.
There are no checks on quality.

https://glittr.org/?per_page=25&sort_by=stargazers&sort_direction=desc

Address of the bookmark: https://glittr.org/?per_page=25&sort_by=stargazers&sort_direction=desc

]]> BioStar https://bioinformaticsonline.com/bookmarks/view/30336/finding-patterns-in-biological-sequences Thu, 22 Dec 2016 10:30:49 -0600 https://bioinformaticsonline.com/bookmarks/view/30336/finding-patterns-in-biological-sequences <![CDATA[Finding Patterns in Biological Sequences]]> In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provide biological motivation, and methods of biological verification of such patterns. Finally we list publicly available tools and databases for pattern discovery. On-line supplement is available through http://genetics.uwaterloo.ca/∼tvinar/cs798g/motif.

Address of the bookmark: http://engr.case.edu/li_jing/papers/00798gpattern.pdf

]]> Jit https://bioinformaticsonline.com/bookmarks/view/44362/biostats-book Mon, 14 Aug 2023 03:11:39 -0500 https://bioinformaticsonline.com/bookmarks/view/44362/biostats-book <![CDATA[Biostats book !]]> https://practical-stats-med-r.netlify.app/

Address of the bookmark: https://practical-stats-med-r.netlify.app/

]]> Abhi https://bioinformaticsonline.com/videolist/watch/2882/phylogenetics Fri, 23 Aug 2013 03:53:43 -0500 https://bioinformaticsonline.com/videolist/watch/2882/phylogenetics <![CDATA[Phylogenetics]]> 006 - Phylogenetics Paul Andersen discusses the specifics of phylogenetics. The evolutionary relationships of organisms are discovered through both morphological and molecular data. A specific type of phylogenetic tree, the cladogram, is also covered. Intro Music Atribution Title: I4dsong_loop_main.wav Artist: CosmicD Link to sound: http://www.freesound.org/people/CosmicD/sounds/72556/ Creative Commons Atribution License]]>