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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/44731?offset=150</link>
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	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4193/bioinformatics-101-running-blast</guid>
	<pubDate>Tue, 03 Sep 2013 14:59:50 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4193/bioinformatics-101-running-blast</link>
	<title><![CDATA[Bioinformatics 101 -  Running BLAST]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/CYnjROfGXv8" frameborder="0" allowfullscreen></iframe>How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Delivered live at the Tomato Disease Workshop 2010. For more information, please visit http://www.extension.org/pages/32521/bioinformatics-101-video.]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/40489/machine-learning-training-and-courses-in-bioinformatics</guid>
	<pubDate>Tue, 31 Dec 2019 19:33:07 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/40489/machine-learning-training-and-courses-in-bioinformatics</link>
	<title><![CDATA[Machine learning training and courses in bioinformatics !]]></title>
	<description><![CDATA[<p>Machine learning techniques have been successful in analyzing biological data because of their capabilities in handling randomness and uncertainty of data noise and in generalization. In this class, we will learn basics about probabilistic models and machine learning techniques. We will focus on probabilistic models (Markov models, Hidden Markov models, and Bayesian networks) for biological sequence analysis and systems biology. Other machine learning techniques, such as Naive bayes, neural networks and SVMs will only be covered briefly.</p>
<p>More at&nbsp;http://homes.sice.indiana.edu/yye/lab/teaching/spring2017-I529/</p>
<p>More tutorial at&nbsp;</p>
<p><a href="http://calla.rnet.missouri.edu/cheng_courses/mlbioinfo/mlbioinfo.htm">http://calla.rnet.missouri.edu/cheng_courses/mlbioinfo/mlbioinfo.htm</a></p>
<p><a href="http://www.raetschlab.org/lectures/MLBioinformatics">http://www.raetschlab.org/lectures/MLBioinformatics</a></p>
<p><a href="http://www.raetschlab.org/lectures/bertinoro08">http://www.raetschlab.org/lectures/bertinoro08</a></p>
<p>Book at&nbsp;</p>
<p><a href="https://personal.utdallas.edu/~pradiptaray/teaching/7_deep_learning_bioinfo.pdf">https://personal.utdallas.edu/~pradiptaray/teaching/7_deep_learning_bioinfo.pdf</a></p><p>Address of the bookmark: <a href="http://homes.sice.indiana.edu/yye/lab/teaching/spring2017-I529/" rel="nofollow">http://homes.sice.indiana.edu/yye/lab/teaching/spring2017-I529/</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/4081/csir-institute-of-genomics-integrative-biology</guid>
  <pubDate>Thu, 29 Aug 2013 05:22:03 -0500</pubDate>
  <link></link>
  <title><![CDATA[CSIR-INSTITUTE OF GENOMICS &amp; INTEGRATIVE BIOLOGY]]></title>
  <description><![CDATA[
<p>CSIR-INSTITUTE OF GENOMICS &amp; INTEGRATIVE BIOLOGY, Mall Road, Delhi 110007</p>

<p>POSITIONS OPEN FOR TEMPORARY RESEARCH PROJECT POSTS</p>

<p>(Date of interview 23rd September 2013 at 10:30 AM)</p>

<p>CSIR-Institute of Genomics &amp; Integrative Biology (IGIB), desires to engage qualified incumbents on purely temporary basis as detailed below:</p>

<p>Project Code/Title (Project Code BSC0123)</p>

<p>Genome dynamics in Cellular Organization, Differentiation and Enantiostasis (GENCODE)</p>

<p>Project Fellow<br />	<br />First Class M.Sc./M.Tech in bioinformatics/Human Genetics/Genomics</p>

<p>Rs. 16,000/- + 30 % HRA per month</p>

<p>Sr. Project Fellow	</p>

<p>First Class M.Sc./M.Tech in bioinformatics/Human Genetics/Genomics</p>

<p>With two years of experience in NGS data analysis.</p>

<p>Rs. 18,000/- + 30 % HRA per month</p>

<p>Age relaxation as per Govt. of India instructions.</p>

<p>Engagement is for the project and on behalf of the funding agency and the tenure shall be as mentioned above. The duration of the post is initially for One year or till the closing date of the project, whichever is earlier. Tenure may be extendable up to project duration. Contract may be terminated at any time by giving one-month notice by either side. The applicants will have no claim implicit or explicit for consideration against any CSIR/IGIB post.</p>

<p>How to Apply:</p>

<p>It is mandatory for eligible applicants to apply by both the processes as given below:</p>

<p>1.    Sending the resume in MS Word format directly to hrd@igib.res.in (Mentioning the Project Code-Post Code in the Subject Line of the email example:GAP0059-1)</p>

<p>2.    They also need to fill up proforma by clicking on the following link HR Online Form.</p>

<p>3.    Candidate cannot apply for more than two posts.</p>

<p>Last date of receiving application is 02-09-2013.</p>

<p>No application would be entertained with result awaited status or after due date.</p>

<p>The email will be sent to the short listed candidates.</p>

<p>No TA/DA will be paid to the candidates to attend the interview. The engagement shall be as per guidelines of CSIR/Funding agency. Candidates will have an option to give reply in Hindi.</p>

<p>Note: The shortlisted candidates, who will receive the email for interview, have to report at 09:00 AM on the day of interview along with any Photo ID card and original certificates for entry purpose. Entry will be closed by 10:00 AM.</p>

<p>More @ http://www.igib.res.in/sites/default/files/23092013.htm</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/fun/view/42877/bioinformatician-on-valentines-day</guid>
	<pubDate>Sun, 14 Feb 2021 11:36:32 -0600</pubDate>
	<link>https://bioinformaticsonline.com/fun/view/42877/bioinformatician-on-valentines-day</link>
	<title><![CDATA[Bioinformatician on Valentine's Day]]></title>
	<description><![CDATA[<p>Once asked to a bioinformatician "How is ur Valentine's Day?"</p><blockquote><p>Bioinformatician replied:</p><p>if ($date == "Valentine's Day" &amp;&amp; $me =! Bioinformatician) {</p><p>rose_day(); promise_day(); kiss_day();</p><p>}</p><p>else {</p><p>hack_genome(); ko-fi(); youtube(); do_scripting(); sleep();</p><p>)</p></blockquote>]]></description>
	<dc:creator>BioQueen</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/3013/python-and-biopython-tutorial</guid>
	<pubDate>Fri, 23 Aug 2013 06:47:40 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/3013/python-and-biopython-tutorial</link>
	<title><![CDATA[Python and BioPython Tutorial]]></title>
	<description><![CDATA[<p>A quickstart tutorial that allows to become familiar with the Python language. The exercises expect knowledge of basic concepts of programming. A group of 2nd year computer science students with no previous Python knowledge required 60'-90' to complete the exercises. With about 3 hours time, the exercise is suitable for non-programmers as well.</p><p>Address of the bookmark: <a href="http://www.biotnet.org/training-materials/python-programmers" rel="nofollow">http://www.biotnet.org/training-materials/python-programmers</a></p>]]></description>
	<dc:creator>Manshi Raghubanshi</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41991/sequence-ontology-bioinformatics-analysis-soba-tool-to-provide-a-simple-statistical-and-graphical-summary-of-an-annotated-genome</guid>
	<pubDate>Wed, 22 Jul 2020 10:11:13 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41991/sequence-ontology-bioinformatics-analysis-soba-tool-to-provide-a-simple-statistical-and-graphical-summary-of-an-annotated-genome</link>
	<title><![CDATA[Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome]]></title>
	<description><![CDATA[<p><span>We have developed the Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome. We envisage its use during annotation jamborees, genome comparison and for use by developers for rapid feedback during annotation software development and testing. SOBA also provides annotation consistency feedback to ensure correct use of terminology within annotations, and guides users to add new terms to the Sequence Ontology when required. SOBA is available at http://www.sequenceontology.org/cgi-bin/soba.cgi.</span></p>
<p><span>More at <a href="https://pubmed.ncbi.nlm.nih.gov/20494974/">https://pubmed.ncbi.nlm.nih.gov/20494974/</a></span></p><p>Address of the bookmark: <a href="http://www.sequenceontology.org/cgi-bin/soba.cgi" rel="nofollow">http://www.sequenceontology.org/cgi-bin/soba.cgi</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/3967/research-project-posts-for-csir-project-delhi</guid>
  <pubDate>Tue, 27 Aug 2013 04:31:41 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Project Posts for CSIR Project, Delhi]]></title>
  <description><![CDATA[
<p>Positions Open For Temporary Research Project Posts for CSIR Project, Delhi<br />CSIR is looking for bright young candidates to get involved in building algorithms and platforms for large biological data analyses in the areas of comparative genomics, computational workflows, disease association studies, simulating virtual organelles, etc. Anyone who fulfills the eligibility criteria mentioned below may appear for a walk-in interview on 3rd September 2013 at CSIR Headquarters, Anusandhan Bhawan, 2 Rafi Marg, Delhi – 110001.<br />you can go to link for details or download PDF</p>

<p>http://www.csir.res.in/External/Heads/aboutcsir/announcements/ProjectPost_130813.pdf</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/42172/sr-scientist-bioinformatics-vacancies-at-indian-institute-of-toxicology-research-india</guid>
  <pubDate>Tue, 01 Sep 2020 07:21:04 -0500</pubDate>
  <link></link>
  <title><![CDATA[Sr. Scientist Bioinformatics Vacancies at Indian Institute of Toxicology Research, India]]></title>
  <description><![CDATA[
<p>Start date of online Registration: Wednesday August 19, 2020 11:00 Hrs IST<br />Last date for Registration: Monday September 21, 2020 17:30 Hrs IST<br />Last date for submission of online application: Monday September 21, 2020 17:30 Hrs IST<br />Last date of Receipt of physical copy of application at CSIR-IITR: Tuesday October 05, 2020 17:30 Hrs IST</p>

<p>Pay Matrix Level-12<br />No. of Post-01<br />(UR)<br />Post – Sr. Scientist<br />Area Bioinformatics<br />Age limit : 37 years<br />PhD in Computational Biology/Bioinformatics with 2 years experience in desired area<br />Or<br />ME/M.Tech in Bioinformatics or Genome Informatics or Genetic Engineering with 3 years experience in desired area<br />Experience of understanding fundamental science behind Artificial Intelligence, machine learning, novel Artificial Intelligence algorithms and architectures, software engineering principles for Artificial Intelligence, natural language processing with proficiency in programming as evident by publications in SCI journals with high impact factor. To be part a group of scientists working in the area of genomics, running the central<br />bioinformatics facility, developing independent projects and providing bioinformatics support to the user scientists of the Institute.</p>

<p>More at </p>

<p>http://14.139.62.50/CSIR-IITR%20Scientist%20Recruitment%20Adv%202020.pdf</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/4098/bioinformatics-algorithm-demonstrations-and-tutorials</guid>
	<pubDate>Thu, 29 Aug 2013 09:23:51 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/4098/bioinformatics-algorithm-demonstrations-and-tutorials</link>
	<title><![CDATA[Bioinformatics Algorithm Demonstrations and Tutorials]]></title>
	<description><![CDATA[<p>Abstract</p>
<p>This project presents demonstrations of selected computer science algorithms important in&nbsp;bioinformatics, implemented in the spreadsheet program Microsoft Excel. Spreadsheets provide an&nbsp;interesting platform for demonstration of algorithms, since various steps of the calculations can be&nbsp;exposed in a manner that is easily comprehensible to users with little programming experience. The&nbsp;algorithms demonstrated include two approaches to approximate string matching (dynamic programming&nbsp;and Shift-AND numeric approximate matching), Hierarchical Clustering (used in phylogenetic studies&nbsp;and microarray analysis of gene expression), a Naive Bayes Classifier for simulated microarray gene&nbsp;expression data, and a simple Neural Network. These demonstrations are designed to serve as&nbsp;instructional aids in bioinformatics courses.</p>
<p>Tutorial @&nbsp;http://www.cybertory.org/downloads/bae/BioinformaticsAlgorithmsInExcel.zip</p>
<p>One of the best resource for online bioinformatics learning is https://stepic.org/Bioinformatics-Algorithms-2 Enjoy the online learning.</p>
<p>Reference :&nbsp;cybertory</p>
<blockquote>
<p><span>" Please add your favourite bioinformatics algorithms and tutorial links below in the comment section, for the benefit of bioinformatics and computational biology community ".&nbsp;</span></p>
</blockquote><p>Address of the bookmark: <a href="http://www.cybertory.org/downloads/bae/BioinformaticsAlgorithmsExcelDoc.pdf" rel="nofollow">http://www.cybertory.org/downloads/bae/BioinformaticsAlgorithmsExcelDoc.pdf</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/42264/bioinformatics-jobs-at-acrannolife</guid>
  <pubDate>Sun, 25 Oct 2020 22:51:35 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics jobs at Acrannolife]]></title>
  <description><![CDATA[
<p>Acrannolife are looking for skilled Bioinformatics Scientists with a minimum of 2yrs Experience in NGS data analysis including Nanopore Sequencing.</p>

<p>This is an opportunity to work on projects that would fundamentally alter the way certain chronic conditions are treated and monitored.</p>

<p>About acrannolife:</p>

<p>We are a team of Post Docs, PhDs, Engineers, Clinicians, and MBAs working towards a future where biology intersects with software(Computational Biology).</p>

<p>We are incubated in Atal Incubation Centre - CCMB and have been backed by some of the leading thought leaders ranging from business to clinical practices.</p>

<p>Interested candidates can fill this form. https://lnkd.in/gtq47hy</p>

<p>and send their CV to hr@acrannolife.com</p>
]]></description>
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