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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/44749?</link>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/44407/mopga-2024-visiting-fellowship-program-for-early-career-researchers</guid>
  <pubDate>Fri, 10 Nov 2023 02:30:22 -0600</pubDate>
  <link></link>
  <title><![CDATA[MOPGA 2024 Visiting Fellowship Program for Early Career Researchers]]></title>
  <description><![CDATA[
<p>France, as a major player in the fight against climate change and guarantor of the spirit of the Paris Agreement, is launching a new MOPGA visiting fellowship program geared towards strengthening scientific contributions to climate change issues raised by the COPs. </p>

<p>This seventh Make Our Planet Great Again (MOPGA) call for applications is intended to welcome at least 40 early career researchers wishing to carry out their research in France. The program is funded by the French Ministry for Europe and Foreign Affairs, in collaboration with the French Ministry for Higher Education and Research, and implemented by Campus France. </p>

<p>The MOPGA 2024 Visiting Fellowship Program for Early Career Researchers will support researchers working on topics listed in the "Research Themes" section.</p>

<p>More at https://www.campusfrance.org/en/mopga-2024</p>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4962/bionics-transhumanism-and-the-end-of-evolution-full-documentary</guid>
	<pubDate>Fri, 27 Sep 2013 11:54:17 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4962/bionics-transhumanism-and-the-end-of-evolution-full-documentary</link>
	<title><![CDATA[Bionics, Transhumanism, and the end of Evolution (Full Documentary)]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/cU1-YFbAifA" frameborder="0" allowfullscreen></iframe>Bionics, Transhumanism, and the end of Evolution (Full Documentary) .                        
                       
                        
                          
                              
                               
                            
                                        
2013                                                                        
This documentary and the rest of the documentaries presented relate to important times and figures in history, historic places and sites, archaeology, science, conspiracy theories, and education.  
The Topics of these video documentaries are varied and cover ancient history, Rome, Greece, Egypt, science, technology, nature, planet earth, the solar system, the universe, World wars, Battles, education, Biographies, television, archaeology, Illuminati, Area 51, serial killers, paranormal, supernatural, cults, government cover-ups, corruption, martial arts, space, aliens, ufos, conspiracy theories, Annunaki, Nibiru, Nephilim, satanic rituals, religion, strange phenomenon, origins of Mankind]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/33617/list-of-universities-offering-bachelor-or-master-bioinformatics-degree-in-pakistan</guid>
	<pubDate>Wed, 21 Jun 2017 04:20:43 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/33617/list-of-universities-offering-bachelor-or-master-bioinformatics-degree-in-pakistan</link>
	<title><![CDATA[List of universities offering Bachelor or Master bioinformatics degree in Pakistan]]></title>
	<description><![CDATA[<p>There are a lot of universities offering Bachelor or Master degree in Pakistan. Following are the list of few intitute/universities</p><p>Bachelor/ BS Bioinformatics at<br />1. Al-khair University, Bhimber<br />2. Government College University, Faisalabad<br />3. University Of Agriculture, Faisalabad<br />4. Comsats Institute Of Information Technology [isb], Islamabad<br />5. International Islamic University, Islamabad<br />6. Quaid-e-azam University, Islamabad<br />7. Khushal Khan Khattak University, Karak<br />8. Virtual University Of Pakistan, Lahore<br />9. Virtual University Of Pakistan, Lahore<br />10. Hazara University, Mansehra<br />11. Shaheed Benazir Bhutto Women University, Peshawar<br />12. Comsats Institute Of Information Technology, Sahiwal<br />13. Capital University Of Science And Technology, Islamabad<br />14. Foundation University, Islamabad<br />15. Baqai Medical University/hospital, Karachi<br />16. Institute Of Business And Technology(main Campus), Karachi<br />17. Sir Syed University Of Engineering &amp; Technology, Karachi<br />18. Forman Christian College, Lahore<br />19. Qarshi University (lhr), Lahore<br />20. The Superior University, Lahore<br />21. University Of Management And Technology, Lahore<br />22. Federal Institute Of Health Sciences, Lahore<br />23. Shaheed Benazir Bhutto Women University Peshawar, Sub Campus, Swabi<br />24. Government Postgraduate College ( Mandian), Abbottabad<br />25. Federal Institute Of Health Sciences, Multan<br />26. Fedral Institute Of Health Sciences, Muzaffarabad<br />27. The Limit Institution Of Health Sciences, Sahiwal</p><p><br />Master/ MS Bioinformatics cources at<br />1. Government College University, Faisalabad<br />2. Comsats Institute Of Information Technology [isb], Islamabad<br />3. International Islamic University, Islamabad<br />4. National University Of Science &amp; Technology, Islamabad<br />5. Quaid-e-azam University, Islamabad<br />6. University Of Sindh, Jamshoro<br />7. Virtual University Of Pakistan, Lahore<br />8. Hazara University, Mansehra<br />9. Shaheed Benazir Bhutto Women University, Peshawar<br />10. Capital University Of Science And Technology, Islamabad<br />11. Cecos University Of Information Tech. &amp; Emerging Sciences, Peshawar</p><p>The real bioinformatics scope lies if there are research labs which work in this field. One has to take account of that. If so then try to get information of those labs and visit them to get a hang of the work they pursue.</p><p>There is a huge buzz of precision medicine in light of genomics all around the world. One should also try to see how genomics infrastructure is built up or standing in Pakistan. If research labs having collaboration with hospitals employ genomics then one must also visit such labs. This will bring new avenues in healthcare advances. Not only it opens up the wealth of knowledge one can make out of genomics study but will also advance the critical thinking of therapies.</p><p>So I would encourage to target research labs working in the fields and also get information of hospitals employing genomics, this will give you an overall understanding of the fields demand in your country.</p>]]></description>
	<dc:creator>Reshma Khatun</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/34744/foldit-solve-puzzles-for-science</guid>
	<pubDate>Thu, 21 Dec 2017 15:17:47 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/34744/foldit-solve-puzzles-for-science</link>
	<title><![CDATA[Foldit: Solve Puzzles for Science]]></title>
	<description><![CDATA[<p><span>Foldit</span><span>&nbsp;is an online puzzle video game about protein&nbsp;</span><span>folding. It</span><span>&nbsp;is part of an experimental research project developed by the University of Washington, Center for Game Science, in collaboration with the UW Department of Biochemistry. The objective of&nbsp;</span><span>Foldit</span><span>&nbsp;is to&nbsp;</span><span>fold</span><span>&nbsp;the structures of selected proteins as perfectly as possible</span></p>
<p>https://fold.it/portal/</p><p>Address of the bookmark: <a href="https://fold.it/" rel="nofollow">https://fold.it/</a></p>]]></description>
	<dc:creator>Robert M Willioms</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44742/nasa-open-science-data-repository</guid>
	<pubDate>Wed, 18 Dec 2024 11:54:47 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44742/nasa-open-science-data-repository</link>
	<title><![CDATA[NASA Open Science Data Repository]]></title>
	<description><![CDATA[<p><span>The NASA Open Science Data Repository (OSDR) enables access to space-related data from experiments and missions that investigate biological and health responses of terrestrial life to spaceflight. The goal of OSDR is to enable multi-modal and multi-hierarchical fundamental space life science data be reused toward basic science, applied science, and operational outcomes for space exploration and knowledge discovery. These data include &lsquo;omics, phenotypic, physiological, behavioral, hardware, environmental telemetry; raw, processed; tabular, text, code, bioimaging, and video.</span></p>
<p><span>https://www.nasa.gov/reference/osdr-data-processing/</span></p><p>Address of the bookmark: <a href="https://www.nasa.gov/osdr/" rel="nofollow">https://www.nasa.gov/osdr/</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/2349/bioinformatics-understanding-of-living-systems-through-information-science</guid>
	<pubDate>Wed, 14 Aug 2013 11:50:17 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/2349/bioinformatics-understanding-of-living-systems-through-information-science</link>
	<title><![CDATA[Bioinformatics -- Understanding of living systems through  information science]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/6Ovd_GOM9-g" frameborder="0" allowfullscreen></iframe>Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics. In this new field, computers and techniques from information science are not just used as tools to advance life science research; they're expected to have a major impact on how we think about the life sciences.

Q. The main feature of bioinformatics is, it utilizes computers to analyze life. One is example is the genome. In all organisms, DNA contains genetic information, and this is called the genome. But the amount of information involved is huge, so recently, it's been read using next-generation sequencers, and analyzed by computers. In bioinformatics research, what we do is utilize those genome information to investigate the principles of life.

As an organism evolves, its genome sequence changes through sudden mutations. Additionally, at the genome level, mutations called rearrangements, such as inversions, transpositions, and duplications, occur. 

The genome comparison system developed by the Sakakibara Lab calculates homologous sequences called anchors, which are conserved between species. If the genome is considered as a long text, then anchors can be thought of as words.

Q. We're coming to understand the genomes of various organisms - not just humans, but monkeys, chimpanzees, bacteria, and so on. The first method used to analyze a genome is comparing it with the genomes of other organisms, to see where it's the same and where it's different. In that way, the content of the genome is decoded bit by bit, using computers. By contrast, in our method, we've developed software called Murasaki, which we also use to analyze large genomes, by comparing them with those of other organisms.

The Sakakibara Lab uses a next-generation sequencer at Keio University, along with a cluster machine with hundreds of CPUs. In this way, the Lab is analyzing genome mutations that cause cancer, and the genome of the natto production strain Bacillus subtilis.

Until now, genome analysis could only be done in national-scale projects. But now, next-generation sequencer development has made genome analysis possible in an ordinary lab. In a world-first achievement, the Sakakibara Lab has decoded the natto bacillus genome, through analysis using Keio's next-generation sequencer.

Q. In the future, biology and the life sciences may become almost entirely information science and computer science. And in healthcare, that may enable us, for example, to predict whether individuals are susceptible to cancer, or to certain lifestyle-related diseases, by understanding their personal genome data. So, I think it's amply possible that we can make use of such information effectively, to help people live longer and be free from disease, by thinking about their lifestyle habits.
 
Bioinformatics is only two decades old. In this field, many areas are still unknown. Professor Sakakibara, having been involved since the beginning, will continue tackling new, challenging research projects.]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/6052/university-of-california-irvine-center-for-complex-biological-systems</guid>
	<pubDate>Mon, 04 Nov 2013 17:10:29 -0600</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/6052/university-of-california-irvine-center-for-complex-biological-systems</link>
	<title><![CDATA[University of California, Irvine - Center for Complex Biological Systems]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/chPJ6OdVl4o" frameborder="0" allowfullscreen></iframe>The University of California Irvine's Center for Complex Biological Systems got its start just as there was a revolution in biology. Systems Biology requires that scientists work across many disciplines including engineering, physics and mathematics. The Center specializes in helping form the kinds of teams that will propel biological research into the future. It is also proud to be able to train students in the new interdisciplinary approach.

http://ccbs.uci.edu]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44760/the-future-of-bioinformatics-innovations-and-opportunities</guid>
	<pubDate>Mon, 20 Jan 2025 12:44:53 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44760/the-future-of-bioinformatics-innovations-and-opportunities</link>
	<title><![CDATA[The Future of Bioinformatics: Innovations and Opportunities]]></title>
	<description><![CDATA[<p>Bioinformatics, the interdisciplinary field that merges biology, computer science, and statistics, has transformed the way we understand biological systems. As we stand at the cusp of a new era in scientific discovery, the future of bioinformatics promises even greater advancements, powered by cutting-edge technologies and a growing understanding of life&rsquo;s complexities.</p><h4>1. Big Data and Bioinformatics</h4><p>The exponential growth in biological data, driven by advancements in sequencing technologies and high-throughput experiments, has made bioinformatics an indispensable tool. By 2030, we anticipate:</p><ul>
<li>
<p><strong>Petabyte-Scale Data Management</strong>: Enhanced storage solutions and cloud computing platforms will allow researchers to handle the vast amounts of data generated from omics studies, including genomics, transcriptomics, and proteomics.</p>
</li>
<li>
<p><strong>AI and Machine Learning Integration</strong>: Sophisticated algorithms will uncover patterns and relationships in large datasets, enabling predictions about gene function, disease susceptibility, and therapeutic outcomes.</p>
</li>
</ul><h4>2. Personalized Medicine and Genomics</h4><p>Bioinformatics will play a pivotal role in tailoring healthcare to individual patients. Key developments include:</p><ul>
<li>
<p><strong>Whole-Genome Sequencing in Clinics</strong>: The decreasing cost of sequencing will make it routine in medical diagnostics, enabling personalized treatment plans based on an individual&rsquo;s genetic makeup.</p>
</li>
<li>
<p><strong>Drug Repurposing and Development</strong>: Computational tools will identify potential new uses for existing drugs, accelerating the development of targeted therapies.</p>
</li>
</ul><h4>3. Advancing Computational Tools</h4><p>The future will see the development of more user-friendly and powerful bioinformatics tools:</p><ul>
<li>
<p><strong>Graph-Based Approaches</strong>: Enhanced algorithms for analyzing complex biological networks, such as protein-protein interaction maps.</p>
</li>
<li>
<p><strong>Visualization Tools</strong>: Intuitive software for visualizing multi-dimensional data, enabling researchers to interpret findings more effectively.</p>
</li>
</ul><h4>4. Synthetic Biology and Systems Biology</h4><p>Bioinformatics will continue to drive progress in synthetic and systems biology by:</p><ul>
<li>
<p><strong>Gene Circuit Design</strong>: Leveraging computational models to design and simulate synthetic biological systems.</p>
</li>
<li>
<p><strong>Understanding Cellular Pathways</strong>: Integrating multi-omics data to model cellular processes with unprecedented accuracy.</p>
</li>
</ul><h4>5. Bioinformatics in Agriculture and Environmental Science</h4><p>Beyond healthcare, bioinformatics will revolutionize agriculture and environmental conservation:</p><ul>
<li>
<p><strong>Crop Improvement</strong>: Genomic studies will help develop high-yield, disease-resistant, and climate-resilient crops.</p>
</li>
<li>
<p><strong>Microbial Ecology</strong>: Metagenomics will enhance our understanding of microbial communities, aiding in bioremediation and ecosystem management.</p>
</li>
</ul><h4>6. Democratization of Bioinformatics</h4><p>Open-source software and accessible education will broaden participation in bioinformatics research:</p><ul>
<li>
<p><strong>Community-Driven Projects</strong>: Collaborative platforms like GitHub will continue to foster innovation in tool development.</p>
</li>
<li>
<p><strong>Education and Training</strong>: Online courses and workshops will bridge skill gaps, enabling researchers from diverse backgrounds to contribute.</p>
</li>
</ul><h4>Challenges and Ethical Considerations</h4><p>While the future is bright, challenges remain. Data privacy and ethical concerns surrounding genetic information require careful navigation. Furthermore, addressing the digital divide is critical to ensuring equitable access to bioinformatics resources globally.</p><h4>Conclusion</h4><p>The future of bioinformatics is boundless, with opportunities to revolutionize our understanding of life and improve human health. As technologies evolve and collaborations flourish, bioinformatics will undoubtedly remain at the forefront of scientific discovery, unlocking the secrets of life one dataset at a time.</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/38226/ncbi-to-assist-in-virus-hunting-data-science-hackathon</guid>
	<pubDate>Thu, 15 Nov 2018 12:55:01 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/38226/ncbi-to-assist-in-virus-hunting-data-science-hackathon</link>
	<title><![CDATA[NCBI to assist in Virus Hunting Data Science Hackathon]]></title>
	<description><![CDATA[<p>NCBI Hackathon are pleased to announce the second installment of the&nbsp;<a href="https://ncbiinsights.ncbi.nlm.nih.gov/2017/11/30/ncbi-southern-california-genomics-hackathon-january/" target="_blank">SoCal Bioinformatics Hackathon</a>. From January 9-11, 2019, the&nbsp;<a href="https://www.ncbi.nlm.nih.gov/" target="_blank">NCBI</a>&nbsp;will help run a bioinformatics hackathon in Southern California hosted by the&nbsp;<a href="http://www.csrc.sdsu.edu/" target="_blank">Computational Sciences Research Center</a>&nbsp;at&nbsp;<a href="http://www.sdsu.edu/" target="_blank">San Diego State University</a>!</p><p><span>NCBI Hackathon</span>&nbsp;specifically looking for folks who have experience in computational virus hunting or adjacent fields to identify known, taxonomically-definable and novel viruses from a few hundred thousand metagenomic datasets that we&rsquo;ll put on cloud infrastructure. This event is for researchers, including students and postdocs, who are already engaged in the use of bioinformatics data or in the development of pipelines for virological analyses from high-throughput experiments. If this describes you, please&nbsp;<a href="https://goo.gl/forms/kDnSG0IAZD62XQRe2" target="_blank">apply</a>! The event is open to anyone selected for the hackathon and willing to travel to SDSU (see below).</p><p>https://ncbiinsights.ncbi.nlm.nih.gov/2018/11/09/ncbi-sdsu-virus-hunting-data-science-hackathon-january-2019/</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44852/what-is-data-science-%E2%80%94-a-bioinformatics-perspective</guid>
	<pubDate>Mon, 16 Jun 2025 01:44:34 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44852/what-is-data-science-%E2%80%94-a-bioinformatics-perspective</link>
	<title><![CDATA[What is Data Science? — A Bioinformatics Perspective]]></title>
	<description><![CDATA[<p>In today&rsquo;s era of big biology, we&rsquo;re generating more data than ever before&mdash;genomes, transcriptomes, proteomes, metabolomes, microbiomes&hellip; you name it. But raw biological data doesn&rsquo;t speak for itself. Making sense of it requires more than traditional biology. This is where data science steps in.</p><p><strong>So, What Is Data Science?</strong><br />At its core, data science is the interdisciplinary field that extracts knowledge and insights from data using programming, statistics, and domain expertise. In bioinformatics, data science enables us to turn gigabytes of sequence data into biological meaning.</p><p>Imagine trying to understand gene regulation in cancer by analyzing thousands of RNA-seq samples, or predicting antibiotic resistance from bacterial genomes&mdash;these challenges are not solvable through wet lab experiments alone. They require data-driven thinking.</p><p><strong>Data Science Meets Bioinformatics</strong><br />Bioinformatics is inherently a data science domain. From genomics to systems biology, every field in modern biology relies on data science techniques to:</p><p>Clean and process massive datasets</p><p>Discover patterns in high-dimensional data</p><p>Build predictive models (e.g., for disease classification)</p><p>Visualize complex biological networks and trends</p><p>Integrate diverse data types (e.g., transcriptomic + epigenomic data)</p><p><strong>The Bioinformatics Toolkit</strong><br />Here&rsquo;s what data science typically looks like in bioinformatics:</p><p>Task Data Science Role<br />Sequence alignment Efficient algorithms, indexing, parallel processing<br />Gene expression analysis Statistical modeling (e.g., DESeq2, limma)<br />Variant calling Data filtering, probabilistic models<br />Clustering of cells in single-cell data Unsupervised learning<br />Protein structure prediction Deep learning models (e.g., AlphaFold)<br />Metagenomics Data integration, classification, dimensionality reduction</p><p>Common tools include Python, R, Bioconductor, scikit-learn, Pandas, Seurat, and TensorFlow&mdash;often working together in reproducible workflows.</p><p><strong>It's Not Just About Coding</strong><br />A common misconception is that bioinformatics is just programming or scripting. But being a data scientist in bioinformatics also means:</p><p>Understanding experimental design</p><p>Asking biologically meaningful questions</p><p>Choosing the right statistical or machine learning models</p><p>Communicating findings effectively (e.g., plots, dashboards, papers)</p><p>In other words, data science in bioinformatics is where biology, statistics, and computer science converge.</p><p><strong>Why It Matters</strong><br />The real power of data science in bioinformatics is its ability to scale discovery.</p><p>Instead of studying one gene, we can study thousands.</p><p>Instead of analyzing one species, we can explore entire ecosystems.</p><p>Instead of waiting months for lab results, we can generate hypotheses in days.</p><p>From personalized medicine and cancer diagnostics to agricultural genomics and pandemic surveillance, data science is at the heart of the bioinformatics revolution.</p><p><strong>Final Thoughts</strong><br />If you&rsquo;re a biologist who&rsquo;s curious about code, or a data enthusiast fascinated by life sciences, bioinformatics is your playground&mdash;and data science is your toolkit.</p><p>In bioinformatics, data science isn&rsquo;t just useful. It&rsquo;s essential.</p><p>&nbsp;</p>]]></description>
	<dc:creator>Abhi</dc:creator>
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