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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/44760?offset=480</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/1469/prime-minister%E2%80%99s-100k-genome-project</guid>
	<pubDate>Thu, 08 Aug 2013 09:40:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/1469/prime-minister%E2%80%99s-100k-genome-project</link>
	<title><![CDATA[Prime Minister’s 100k Genome Project]]></title>
	<description><![CDATA[<p>Genomics Ebgland is destined to sequence 100,000 patients over the next five year in England.&nbsp; A landmark project by british government.</p><p>Genomics England will play a key role in building on the UK&rsquo;s long track record as leader in medical science advances to push the boundaries by unlocking the power of DNA data. The UK will become the first ever country to introduce this technology in its mainstream health system &ndash; leading the global race for better tests, better drugs and above all better, more personalised care.</p><p>http://www.genomicsengland.co.uk/100k-genome-project/</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/32849/car-reconstructing-contiguous-regions-of-an-ancestral-genome</guid>
	<pubDate>Thu, 18 May 2017 05:24:01 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/32849/car-reconstructing-contiguous-regions-of-an-ancestral-genome</link>
	<title><![CDATA[CAR: Reconstructing Contiguous Regions of an Ancestral Genome]]></title>
	<description><![CDATA[<div id="abstract-1">
<p id="p-5">We describe a new method for predicting the ancestral order and orientation of those intervals from their observed adjacencies in modern species. We combine the results from this method with data from chromosome painting experiments to produce a map of an early mammalian genome that accounts for 96.8% of the available human genome sequence data. The precision is further increased by mapping inversions as small as 31 bp. Analysis of the predicted evolutionary breakpoints in the human lineage confirms certain published observations but disagrees with others. Although only a few mammalian genomes are currently sequenced to high precision, our theoretical analyses and computer simulations indicate that our results are reasonably accurate and that they will become highly accurate in the foreseeable future. Our methods were developed as part of a project to reconstruct the genome sequence of the last ancestor of human, dogs, and most other placental mammals;</p>
</div><p>Address of the bookmark: <a href="http://www.bx.psu.edu/miller_lab/car/" rel="nofollow">http://www.bx.psu.edu/miller_lab/car/</a></p>]]></description>
	<dc:creator>Abhimanyu Singh</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/1491/2013-nextgen-genomics-bioinformatics-technologies-ngbt-conference-new-delhi-india</guid>
  <pubDate>Thu, 08 Aug 2013 16:21:16 -0500</pubDate>
  <link></link>
  <title><![CDATA[2013 NextGen Genomics &amp; Bioinformatics Technologies (NGBT) Conference, New Delhi, INDIA]]></title>
  <description><![CDATA[
<p>2013 NextGen Genomics &amp; Bioinformatics Technologies (NGBT) Conference</p>

<p>SciGenom Research Foundation (SGRF) and Institute of Genomics and Integrative Biology (IGIB) are pleased to host the Next-Generation Sequencing and Bioinformatics for Genomics &amp; Healthcare conference.</p>

<p>In the ten years since the first human reference genome was completed for US$3 billion the sequencing technologies have radically changed leading to great reduction in sequencing cost. Today a human genome can be sequenced for under US$ 5000 in less than two weeks. It is expected that by the end of 2015 the cost of sequencing a human genome will drop to below thousand dollars. The next generation sequencing technologies over the past five years have enabled a large number of genomic studies that impact human health and disease. Also, this has made possible the growth of microbial, animal and plant genomics studies. While the data production has increased at a rapid pace challenges remain in analyzing and understanding the data. The conference will cover the next generation sequencing (NGS) technologies, bioinformatics for NGS and applications of NGS in many areas including personalized medicine.</p>

<p>For more info : http://www.scigenomconferences.com/2013/default.php</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/1720/postdoctoral-associate-bioinformatics-at-duke-university-medical-center</guid>
  <pubDate>Sat, 10 Aug 2013 18:38:38 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Associate - Bioinformatics  at Duke University Medical Center]]></title>
  <description><![CDATA[
<p>The Department of Biostatistics and Bioinformatics at Duke University Medical Center is seeking a Postdoctoral Associate for a one year appointment to work on several high-dimensional research projects. The specific goals of the project are to identify genes or molecular markers that are predictive of clinical outcomes in renal and prostate cancer.</p>

<p>Candidates must have: a PhD degree in statistics, biostatistics or bioinformatics, extensive experience in analyzing high-dimensional data (microarray, SNP, CNVs) and of validation approaches. In addition, experience in penalized regression methods, data base manipulation; and strong programming skills in order to conduct Monte Carlo studies and applications (R). Candidate must have excellent communication skills (verbal, written and presentation), a strong proficiency in Linux system.</p>

<p>This position is available immediately and will be filled as soon as possible. Appointment could be extended beyond the first year based on additional funding.</p>

<p>For more information about the Department of Biostatistics and Bioinformatics, please visit our website: http://www.biostat.duke.edu.</p>

<p>For more info: http://biostat.duke.edu/sites/biostat.duke.edu/files/Halabi%20-%20Postdoc%20Job%20Posting%202013%20updated.pdf</p>

<p>Duke University is an Equal Opportunity/Affirmative Action Employer.</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/34731/postdoctoral-scholarship-in-bioinformatics-at-kth</guid>
  <pubDate>Thu, 21 Dec 2017 03:55:53 -0600</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral scholarship in Bioinformatics at  KTH]]></title>
  <description><![CDATA[
<p>The School of Biotechnology offers a curriculum that reflects the multidisciplinary nature of Biotechnology, integrating theoretical and applied science in undergraduate and graduate courses. The school has six departments with about 300 employees, located at AlbaNova University Center in Stockholm and Science for Life Laboratory in Solna. The Biotechnology research within the school is internationally well recognized.</p>

<p>We are now seeking a postdoc scholarship holder with strong background in transcriptomics to use this large collection of data for integrative studies. Focus will be on advanced bioinformatics and statistical analysis of data from high-throughput sequencing including integration with the other platforms.</p>

<p>The scholarship holder must have a PhD with an outstanding research and publication record and will be selected based on her/his excellence and her/his skills. A PhD should have been awarded less than five years before the deadline of the application. The scholarship holder must have a strong background in bioinformatics, computer science, computational biology or equivalent with a profound knowledge about biology and biostatistics.</p>

<p>Your complete application must be received at KTH no later than 2018-01-15.</p>

<p>https://www.kth.se/en/om/work-at-kth/stipendier/postdoctoral-scholarship-in-bioinformatics-with-focus-on-transcriptomics-and-data-integration-1.779571</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/view/2021</guid>
	<pubDate>Mon, 12 Aug 2013 09:27:57 -0500</pubDate>
	<link>https://bioinformaticsonline.com/view/2021</link>
	<title><![CDATA[What are the difference between BioRuby and BioGem?]]></title>
	<description><![CDATA[<p>I came across two diferent but matching term BioRuby and BioGem. What are the difference between these two term? If both are using same Ruby language for development then why did they develope two different biological packages.</p>]]></description>
	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4090/computational-biology-in-the-21st-century-making-sense-out-of-massive-data</guid>
	<pubDate>Thu, 29 Aug 2013 08:32:26 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4090/computational-biology-in-the-21st-century-making-sense-out-of-massive-data</link>
	<title><![CDATA[Computational Biology in the 21st Century: Making Sense out of Massive Data]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/I99UiA_vaJQ" frameborder="0" allowfullscreen></iframe>Computational Biology in the 21st Century: Making Sense out of Massive Data    
    
Air date:  Wednesday, February 01, 2012, 3:00:00 PM
Category:  Wednesday Afternoon Lectures  
 
Description:  The last two decades have seen an exponential increase in genomic and biomedical data, which will soon outstrip advances in computing power to perform current methods of analysis. Extracting new science from these massive datasets will require not only faster computers; it will require smarter algorithms. We show how ideas from cutting-edge algorithms, including spectral graph theory and modern data structures, can be used to attack challenges in sequencing, medical genomics and biological networks. 

The NIH Wednesday Afternoon Lecture Series includes weekly scientific talks by some of the top researchers in the biomedical sciences worldwide. 

Author:  Dr. Bonnie Berger  
Runtime:  00:58:06  
Permanent link:  http://videocast.nih.gov/launch.asp?17563]]></description>
	
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/35798/an-introduction-to-applied-bioinformatics</guid>
	<pubDate>Fri, 02 Mar 2018 04:26:38 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/35798/an-introduction-to-applied-bioinformatics</link>
	<title><![CDATA[An Introduction to Applied Bioinformatics]]></title>
	<description><![CDATA[<p>IAB is primarily being developed by&nbsp;<a href="http://caporasolab.us/people/greg-caporaso/">Greg Caporaso</a>(GitHub/Twitter:&nbsp;<a href="https://github.com/gregcaporaso">@gregcaporaso</a>) in the&nbsp;<a href="http://www.caporasolab.us/">Caporaso Lab</a>&nbsp;at&nbsp;<a href="http://www.nau.edu/">Northern Arizona University</a>. You can find information on the courses I teach on&nbsp;<a href="http://www.caporasolab.us/teaching">my teaching website</a>&nbsp;and information on my research and lab on&nbsp;<a href="http://www.caporasolab.us/">my lab website</a>.</p>
<p>&nbsp;</p><p>Address of the bookmark: <a href="http://readiab.org/" rel="nofollow">http://readiab.org/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/2334/binc-bioinformatics-national-certification-website-address</guid>
	<pubDate>Wed, 14 Aug 2013 09:40:22 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/2334/binc-bioinformatics-national-certification-website-address</link>
	<title><![CDATA[BINC (BioInformatics National Certification) Website address]]></title>
	<description><![CDATA[<p><span>BINC (BioInformatics National Certification) is an initiative of Department of Biotechnology(DBT), Government Of India in coordination with Bioinformatics Center, University of Pune. The objective of the examination is to recognize trained manpower in the area of Bioinformatics. Currently, various Indian universities, Government and private institutions are involved in imparting courses in Bioinformatics in India.</span></p>
<p>Foreign nationals intending to have certification are eligible to appear for BINC examination.<br>Minimum qualification includes a degree from a recognized university/institute in the areas listed in FAQ.<br>Formal training in the area of Bioinformatics is not a prerequisite.<br>Note that the foreign students will only be certified by DBT and are not eligible for the cash award as well as junior research fellowship.</p><p>Address of the bookmark: <a href="http://binc.scisjnu.ernet.in/" rel="nofollow">http://binc.scisjnu.ernet.in/</a></p>]]></description>
	<dc:creator>Kamalakshi Mukherjee</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/36239/scilifelab-tutorial-for-bioinformatics-analysis</guid>
	<pubDate>Tue, 17 Apr 2018 04:33:00 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/36239/scilifelab-tutorial-for-bioinformatics-analysis</link>
	<title><![CDATA[SciLifeLab tutorial for bioinformatics analysis !]]></title>
	<description><![CDATA[<p>SciLifeLab is a national center for molecular biosciences with focus on health and environmental research.</p>
<h2 id="courses">Courses</h2>
<p><a href="http://uppnex.se/twiki/bin/view/Courses/">Old courses (2012-2014)</a></p>
<h3 id="metagenomics-workshop">Metagenomics Workshop</h3>
<p><a href="https://scilifelab.github.io/courses/Metagenomics/1511/">2015 November - Uppsala</a><br><a href="https://scilifelab.github.io/courses/Metagenomics/1611/">2016 November - Uppsala</a><br><a href="https://scilifelab.github.io/courses/Metagenomics/1711/">2017 November - Uppsala</a></p>
<h3 id="introduction-to-bioinformatics-using-ngs-data">Introduction to Bioinformatics Using NGS Data</h3>
<p><a href="https://scilifelab.github.io/courses/ngsintro/1502/">2015 February - Uppsala</a>&nbsp;<br><a href="https://scilifelab.github.io/courses/ngsintro/1505/">2015 May - Gothenburg</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1509/">2015 September - Uppsala</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1511/">2015 November - Lund</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1601/">2016 January - Uppsala</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1604/">2016 April - Link&ouml;ping</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1609/">2016 September - Uppsala</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1611/">2016 November - Ume&aring;</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1701/">2017 January - Uppsala</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1705/">2017 May - Gothenburg</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1709/">2017 September - Lund</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1711/">2017 November - Uppsala</a><br><a href="https://scilifelab.github.io/courses/ngsintro/1802/">2018 February - Uppsala</a></p>
<h3 id="introduction-to-genome-annotation">Introduction to Genome Annotation</h3>
<p><a href="https://scilifelab.github.io/courses/annotation/2015/">2015 April - Uppsala</a><br><a href="https://scilifelab.github.io/courses/annotation/2016/">2016 April - Uppsala</a><br><a href="https://scilifelab.github.io/courses/annotation/2017/">2017 April - Uppsala</a><br><a href="https://scilifelab.github.io/courses/annotation/2018/">2018 May - Uppsala</a></p>
<h3 id="de-novo-genome-assembly">De Novo Genome Assembly</h3>
<p><a href="https://scilifelab.github.io/courses/assembly/1611/">2016 November - Uppsala</a><br><a href="https://scilifelab.github.io/courses/assembly/2017-11-15/">2017 November - Uppsala</a></p>
<h3 id="rna-seq-course">RNA-seq course</h3>
<p><a href="https://scilifelab.github.io/courses/rnaseq/1510/">2015 October - Uppsala</a><br><a href="https://scilifelab.github.io/courses/rnaseq/1604/">2016 April - Uppsala</a><br><a href="https://scilifelab.github.io/courses/rnaseq/1610/">2016 October - Uppsala</a><br><a href="https://scilifelab.github.io/courses/rnaseq/1703/">2017 March - Uppsala</a><br><a href="https://scilifelab.github.io/courses/rnaseq/1711/">2017 November - Uppsala</a><br><a href="https://scilifelab.github.io/courses/rnaseq/labs">RNAseq tutorials</a></p>
<h3 id="r-programming-foundations-for-life-scientists">R Programming Foundations for Life Scientists</h3>
<p><a href="https://scilifelab.github.io/courses/r_programming/1611/">2016 November - Uppsala</a><br><a href="https://scilifelab.github.io/courses/r_programming/1703/">2017 Mars - Uppsala</a></p>
<h3 id="single-cell-rna-sequencing-analysis">Single cell RNA sequencing analysis</h3>
<p><a href="https://scilifelab.github.io/courses/scrnaseq/1710/">2017 October - Uppsala</a></p><p>Address of the bookmark: <a href="https://scilifelab.github.io/courses/" rel="nofollow">https://scilifelab.github.io/courses/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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