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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/45349?offset=1590</link>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22778/sr-research-fellow-technical-asst-at-indian-institute-of-maize-research-india</guid>
  <pubDate>Wed, 17 Jun 2015 18:47:51 -0500</pubDate>
  <link></link>
  <title><![CDATA[Sr Research Fellow &amp; Technical Asst at Indian Institute of Maize Research - India]]></title>
  <description><![CDATA[
<p>Indian Institute of Maize Research Jobs 2015 –</p>

<p>Sr Research Fellow &amp; Technical Asst Posts: Indian Institute of Maize Research (IIMR), New Delhi has advertised a notification for the recruitment of Senior Research Fellow &amp; Technical Assistant vacancies for the project titled “Genetic modifications to improve biological nitrogen fixation for augmenting nitrogen needs of cereals” on contractual basis. Eligible candidates may apply in prescribed application format on or before 25-06-2015. Other details like age, educational qualification, selection process, how to apply are given below…</p>

<p>Indian Institute of Maize Research Vacancy Details:<br />Total No. of Posts: 03<br />Name of the Posts :<br />1. Senior Research Fellow: 02 Posts<br />2. Technical Assistant: 01 Post</p>

<p>Age Limit: Candidates age should be 35 years for Senior Research Fellow, Minimum 21 years and maximum 45 years for Technical Assistant as on the closing date of the application. Age relaxation is 5 years to SC/ST and women candidates and 3 years to OBC candidates as per ICAR rules.</p>

<p>Educational Qualification: Candidates should possess Post graduate degree in Biotechnology/ Molecular Biology/ Bioinformatics/ Plant physiology for Senior Research fellow, Graduate degree in Agriculture/ Biotechnology/ any discipline of life sciences for Technical Assistant with relevant experience.</p>

<p>Selection Process: Candidates will be selected based on their performance in interview.</p>

<p>How to Apply: Eligible candidates can send their application in prescribed format along with bio-data to Dr. Pranjal Yadava, Principal Investigator, ICAR Indian Institute of Maize Research, Pusa Campus, New Delhi-110012 or mail to pranjal.yadava@gmail.com on or before 25-06-2015 &amp; attend the interview along with application in the attached format at the time of interview, one passport size photograph, self attested copies of certificates for age, and qualifications, reprints of publications and ‘No Objection Certificate’, original documents on 01-07-2015. Venue details are mentioned below.</p>

<p>Important Dates:<br />Last Date for Receipt of Application: 25-06-2015<br />Date &amp; Time of Interview : 01-07-2015.<br />Venue: IIMR, Pusa Campus, New Delhi</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/5898/an-entire-genome-written-in-lab</guid>
	<pubDate>Fri, 25 Oct 2013 09:43:03 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/5898/an-entire-genome-written-in-lab</link>
	<title><![CDATA[An entire genome written in lab]]></title>
	<description><![CDATA[<p>This is the first time ever the genetic code has been fundamentally changed. The breakthrough is a huge step forward in synthetic biology and opens up the possibility of turning re-coded bacteria into biofactories, capable of producing potent new forms of protein that could fight disease or generate sustainable materials.</p><p>More @ <a href="http://news.yale.edu/2013/10/17/researchers-rewrite-entire-genome-and-add-healthy-twist">http://news.yale.edu/2013/10/17/researchers-rewrite-entire-genome-and-add-healthy-twist</a></p><p>News Reference:&nbsp;Yale news</p><p><img src="http://images.sciencedaily.com/2011/07/110714142130-large.jpg" alt="image" width="800" height="530" style="border: 0px; border: 0px;"></p><p>Image Source: Sciencedaily.</p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22787/senior-technical-assistant-at-pondicherry-university</guid>
  <pubDate>Wed, 17 Jun 2015 20:46:12 -0500</pubDate>
  <link></link>
  <title><![CDATA[Senior Technical Assistant at Pondicherry University]]></title>
  <description><![CDATA[
<p>Senior Technical Assistant</p>

<p>Eligibility : BE/B.Tech(CSE, ECE, IT)</p>

<p>Location : Pondicherry</p>

<p>Last Date : 26 Jun 2015</p>

<p>Hiring Process : Face to Face Interview<br />Pondicherry University - Job DetailsDate of posting:19 May 15</p>

<p>Senior Technical Assistant Job position in Pondicherry University on temporary basis  </p>

<p>Project Title : "Bioinformatics National Certification (BINC) for certifying quality human resource in Bioinformatics"</p>

<p>Qualification : i) B.E/ B.Tech Computer Science/ Electronics &amp; Communication Engineering/ Information Technology with 55% or equivalent marks. ii) One year Experience in relevant field in Government/ Public Sector or reputed Private Organizations. Desirable : Working experience in JSP and ASP/PHP</p>

<p>No. of Post : 01</p>

<p>Department : Biotechnology</p>

<p>Pay : Rs. 27,800/- </p>

<p>Age Limit : 30 Yrs<br />How to apply</p>

<p>Both above-mentioned posts are purely on temporary basis, extended by one year based on performance and will be terminated with the completion of BINC Program at Pondicherry University. Interested Candidates may send their application in the prescribed format with self-attested copies of all mark sheets and certificates to Dr. Basant K. Tiwary, Coordinator (BINC), Centre for Bioinformatics, Pondicherry University, Puducherry-605 014 before June 26, 2015.</p>

<p>Click Here http://www.pondiuni.edu.in/news/requirement-post-one-senior-technical-assistant-one-computer-assistant-–-dept-biotechnologygove</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/34744/foldit-solve-puzzles-for-science</guid>
	<pubDate>Thu, 21 Dec 2017 15:17:47 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/34744/foldit-solve-puzzles-for-science</link>
	<title><![CDATA[Foldit: Solve Puzzles for Science]]></title>
	<description><![CDATA[<p><span>Foldit</span><span>&nbsp;is an online puzzle video game about protein&nbsp;</span><span>folding. It</span><span>&nbsp;is part of an experimental research project developed by the University of Washington, Center for Game Science, in collaboration with the UW Department of Biochemistry. The objective of&nbsp;</span><span>Foldit</span><span>&nbsp;is to&nbsp;</span><span>fold</span><span>&nbsp;the structures of selected proteins as perfectly as possible</span></p>
<p>https://fold.it/portal/</p><p>Address of the bookmark: <a href="https://fold.it/" rel="nofollow">https://fold.it/</a></p>]]></description>
	<dc:creator>Robert M Willioms</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/poll/view/22920/how-long-have-you-been-a-bioinformatics-scientist-for</guid>
	<pubDate>Tue, 23 Jun 2015 10:55:33 -0500</pubDate>
	<link>https://bioinformaticsonline.com/poll/view/22920/how-long-have-you-been-a-bioinformatics-scientist-for</link>
	<title><![CDATA[How long have you been a bioinformatics scientist for?]]></title>
	<description><![CDATA[<p>Most of the researcher have been a scientist whole life, but infact they actually started paying&nbsp; it with at certain time.So, how long have you been in bioinformatics domain now?</p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/36395/ligand-docking-tools-and-software</guid>
	<pubDate>Wed, 25 Apr 2018 05:05:17 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/36395/ligand-docking-tools-and-software</link>
	<title><![CDATA[Ligand Docking Tools and Software !]]></title>
	<description><![CDATA[<p>Ligand docking referred to cases where small molecule (&ldquo;ligand&rdquo;) is being docked into much larger macromolecule ("target"). The following is partial list of docking software, focusing on free (at least for academic institutes) and/or popular docking tools.&nbsp;</p><p><a href="http://autodock.scripps.edu/" target="_blank">AutoDock</a></p><p>Stochastic (GA)</p><p>Flexible ligand and partially flexible target</p><p><a href="http://www.arguslab.com/" target="_blank">ArgusLab</a></p><p>Systematic</p><p>Flexible ligandX-Score based</p><p><a href="http://dock.compbio.ucsf.edu/" target="_blank">DOCK</a></p><p>Systematic (IC)</p><p>Flexible ligandDOCK 3.5 (force field)</p><p><a href="http://www.simbiosys.ca/ehits/index.html" target="_blank">eHITS</a></p><p>Systematic (RBD of fragments followed by reconstruction)Flexible ligand and partially flexible targetHiTS_Score (empirical)</p><p><a href="http://www.biosolveit.de/" target="_blank">FlexX</a></p><p>Systematic (IC)Flexible ligandFlexX SF (empirical)Commercial</p><p><a href="http://flipdock.scripps.edu/" target="_blank">FLIPDock</a></p><p>Stochastic (GA)Flexible ligand and flexible targetAUTODOCK (empirical)</p><p><a href="http://www.eyesopen.com/products/applications/fred.html" target="_blank">FRED</a></p><p>Systematic (RBD)Flexible ligandChemScore, PLP, ScreenScore, ChemGauss (empirical/consensus)</p><p><a href="http://www.ccdc.cam.ac.uk/products/life_sciences/gold/" target="_blank">GOLD</a></p><p>Stochastic (GA)</p><p>Flexible ligand and partially flexible targetGoldScore, ChemScore (empirical), ASP (knowledge based)</p><p><a href="http://www.molsoft.com/docking.html" target="_blank">ICM</a></p><p>Stochastic (MC)</p><p>Flexible ligand and partially flexible targetICM SF (empirical)</p><p><a href="http://www.scfbio-iitd.res.in/dock/pardock.jsp" target="_blank">ParDOCK</a></p><p>Stochastic (MC)</p><p>RigidBAPPL (empirical)</p><p><em><a href="http://www.scfbio-iitd.res.in/dock/pardock.jsp" target="_blank"></a></em><a href="http://www.tcd.uni-konstanz.de/research/plants.php" target="_blank">PLANTS</a></p><p>Stochastic (ACO)Flexible ligand and partially flexible target</p><p>CHEMPLP, PLP (empirical)</p><p><a href="http://www.biopharmics.com/" target="_blank">Surflex</a></p><p>Systematic (IC/MA)Flexible ligandHammerhead based (empirical)</p><p>Point to note:</p><p>Several studies have shown that the performance of most docking tools is highly dependent on the particular characteristics of both the binding site and the ligand to be investigated, and the determination which method would be more suitable in a specific context is difficult. We encouraged you to check several docking methods to determine which one(s) work best for your system.</p><p>&nbsp;</p><p><a href="http://autodock.scripps.edu/" target="_blank"></a></p>]]></description>
	<dc:creator>Poonam Mahapatra</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/22966/ra-bioinformatics-at-icged</guid>
  <pubDate>Sun, 28 Jun 2015 12:24:01 -0500</pubDate>
  <link></link>
  <title><![CDATA[RA Bioinformatics at ICGED]]></title>
  <description><![CDATA[
<p>Research Associate Position at ICGEB, New Delhi with Dr. Amit Sharma</p>

<p>Starting 15th July 2015, the position relates to a project specifically for in silico drug docking, screening, design, optimisation and linkage with active chemists. </p>

<p>Experience in many docking softwares and operating systems is essential. </p>

<p>Additional experience in bioinformatics and computational biology tools will be useful. </p>

<p>Submit curriculum vitae to: sb.icgeb@gmail.com</p>

<p>Closing date: 5 July 2015</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26252/recombination-detection-tool</guid>
	<pubDate>Tue, 02 Feb 2016 10:11:14 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26252/recombination-detection-tool</link>
	<title><![CDATA[Recombination detection tool]]></title>
	<description><![CDATA[<p>A program to detect recombination hotspots using population genetic data.</p>
<p>More at https://github.com/auton1/LDhot</p><p>Address of the bookmark: <a href="https://github.com/auton1/LDhot" rel="nofollow">https://github.com/auton1/LDhot</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/23160/opencpu</guid>
	<pubDate>Sun, 05 Jul 2015 18:34:46 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/23160/opencpu</link>
	<title><![CDATA[OpenCPU]]></title>
	<description><![CDATA[<p>OpenCPU is a system for embedded scientific computing and reproducible research. The OpenCPU server provides a reliable and interoperable <a href="https://www.opencpu.org/api.html">HTTP API</a> for data analysis based on R.</p><p>The OpenCPU <a href="https://www.opencpu.org/jslib.html">JavaScript client library</a> provides the most seamless integration of R and JavaScript available today.</p><p>OpenCPU uses standard R packaging to develop, ship and deploy web applications. Several open source <a href="https://www.opencpu.org/apps.html">example apps</a> are available from Github.</p><p>Installing your own OpenCPU server is <a href="https://www.opencpu.org/download.html">super easy</a> and only takes a few minutes.</p><p>More at https://www.opencpu.org/</p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/35252/hgt-finder-a-new-tool-for-horizontal-gene-transfer-finding-and-application-to-aspergillus-genomes</guid>
	<pubDate>Wed, 17 Jan 2018 05:03:19 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/35252/hgt-finder-a-new-tool-for-horizontal-gene-transfer-finding-and-application-to-aspergillus-genomes</link>
	<title><![CDATA[HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes]]></title>
	<description><![CDATA[<p><span>HGT-Finder: </span></p>
<p><span>(i) can be used for HGT detection in both prokaryotes and eukaryotes, </span></p>
<p><span>(ii) can report a statistical&nbsp;</span><em>P</em><span>&nbsp;value for each gene to indicate how likely it is to be horizontally transferred, and </span></p>
<p><span>(iii) is fully automated (requires minimal human intervention), as well as very easy to install and run.&nbsp;</span></p><p>Address of the bookmark: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4626719/" rel="nofollow">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4626719/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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