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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/4633?offset=30</link>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/17501/nieduszynski-group</guid>
  <pubDate>Fri, 26 Sep 2014 19:35:06 -0500</pubDate>
  <link></link>
  <title><![CDATA[Nieduszynski Group]]></title>
  <description><![CDATA[
<p>Complete, accurate replication of the genome is essential for life. All chromosomes in eukaryotic cells must be duplicated and then segregated to daughter cells to ensure genetic integrity and produce the large number of cells that make up a multicellular organism. We are using genetic, genomic and computational methods to understand how chromosome replication is regulated to ensure genome stability. By focusing on the basic biology that underpins cell growth and division we aim to provide new insights that may help our understanding of diseases such as cancer and congenital disorders. </p>

<p>More http://www.nieduszynski.org/index.php<br />http://www.path.ox.ac.uk/research/cell-biology-and-pathology/conrad-nieduszynski-group</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26306/busco</guid>
	<pubDate>Sun, 07 Feb 2016 16:02:39 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26306/busco</link>
	<title><![CDATA[BUSCO]]></title>
	<description><![CDATA[<p>Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs</p>
<p>More at http://busco.ezlab.org/</p><p>Address of the bookmark: <a href="http://busco.ezlab.org/" rel="nofollow">http://busco.ezlab.org/</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/42803/bioinformatician-purdue-cancer-center</guid>
  <pubDate>Wed, 03 Feb 2021 22:54:14 -0600</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatician - Purdue Cancer Center]]></title>
  <description><![CDATA[
<p>The Center for Cancer Research is an NCI-designated cancer center. The center is a catalyst for collaborative cancer research around Purdue University. In this role, the selected individual will have the opportunity to cooperate with Purdue faculty and students in performing cutting-edge research and analyses, with opportunities for professional development, and the possibility of co-authorship in faculty research publications. <br />Projects will be challenging, including various model organisms, and we are looking for an individual who is excited about interacting with multi-disciplinary cancer research groups and the development of new tools, techniques, and workflows. Independently perform both routine and project-specific analyses, advise faculty on the design of experiments, writing manuscripts for publication, and writing grant proposals. Interact and collaborate with bioinformatics services (i.e. Statistical Consulting Center to provide relevant services to the campus research community), where applicable. Support all of the bioinformatics activities of the Center for Cancer Research at Purdue University<br />Required:</p>

<p>Master's degree in bioinformatics, computer science, molecular biology, or related field<br />One year of experience in analyzing RNA-Seq data <br />In lieu of a degree, consideration will be given to an equivalent combination of related education and required work experience.<br />Understanding of molecular biology, biochemistry, and genetics<br />Proficiency in writing scripts using Perl, Python, Java, or equivalent languages<br />Proficiency in R and UNIX/LINUX <br />Knowledge of genomics, alignment, annotation, bioinformatics, concepts of sequence assembly<br />Highly motivated and detail-oriented<br />Ability, interest, and curiosity to learn new skills<br />Must possess strong communication skills to work effectively with users across disciplines<br />Ability to work independently and as part of a multi-disciplinary team<br />Strong visual, verbal, and written communication skills<br />Excellent time organizational skills<br />Preferred:</p>

<p>Experience writing software or building software pipelines<br />Experience with oncology-specific public databases including TCGA<br />Experience with deploying and/or running software on high-performance computational systems<br />Statistical and experimental design knowledge<br />Additional Information: </p>

<p>This position is contingent on the availability of funding<br />Purdue will not sponsor employment authorization for this position  <br />A background check will be required for employment in this position<br />FLSA: Exempt (Not Eligible For Overtime)<br />Retirement Eligibility: Defined Contribution Waiting Period <br />Purdue University is an EOE/AA employer. All individuals, including minorities, women, individuals with disabilities, and veterans are encouraged to apply</p>

<p>More at https://careers.purdue.edu/job/West-Lafayette-Bioinformatician-Purdue-Cancer-Center-IN-47906/686617600/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/41040/phd-position-in-molecular-cell-biology</guid>
  <pubDate>Sat, 15 Feb 2020 06:09:55 -0600</pubDate>
  <link></link>
  <title><![CDATA[PhD position in Molecular Cell Biology]]></title>
  <description><![CDATA[
<p>https://www.jobvector.de/jobs-stellenangebote/biologie-life-sciences/wissenschaftliche-r-mitarbeiter-in/phd-position-molecular-cell-biology-129604.html?suid=0ec057818886c1eceac674ca3f83943367a6cbe2</p>

<p>Essential experience / qualifications:<br />We are looking for highly motivated candidates holding a Master / Diploma in Biology, Biochemistry, Molecular Medicine or similar; solid knowledge of molecular and cell biological techniques; good English knowledge.</p>

<p>Applications:<br />Please send your application (including CV, letter of motivation, contact information of two references, and list of publication) by 13.03.2020 at the latest to:</p>

<p>Universitätsklinikum Erlangen<br />Chirurgische Klinik<br />Translational Research Center<br />Prof. Dr. rer. nat. Michael Stürzl<br />Schwabachanlage 12<br />91054 Erlangen<br />E-Mail: michael.stuerzl@uk-erlangen.de</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/4211/socbin-bioinformatics-2014</guid>
  <pubDate>Tue, 03 Sep 2013 18:50:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[SocBiN Bioinformatics 2014]]></title>
  <description><![CDATA[
<p>14th annual conference in Bioinformatics</p>

<p>Date : June 10-13</p>

<p>Organizers: The Society for Bioinformatics in Northern European countries (SocBiN) and the Norwegian Bioinformatics Platform / ELIXIR.NO </p>

<p>Venue: Department of Informatics, University of Oslo, Norway</p>

<p>Topics:<br />Tools and technologies for integrative bioinformatics<br />Metagenomics<br />Comparative genomics and phylogeny<br />Post-ENCODE bioinformatics<br />Gene regulation<br />Cancer genomes<br />Marine genomics</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/34912/list-of-cancer-genomics-research-web-resources</guid>
	<pubDate>Wed, 27 Dec 2017 20:33:09 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/34912/list-of-cancer-genomics-research-web-resources</link>
	<title><![CDATA[List of cancer genomics research web resources !]]></title>
	<description><![CDATA[<p>Major web resources for cancer genomics research</p><p>CGHub <br />https://cghub.ucsc.edu/ <br />Comprehensive data repository; huge data size</p><p>EGA <br />https://www.ebi.ac.uk/ega/ <br />Comprehensive data repository; huge data size</p><p>COSMIC <br />http://cancer.sanger.ac.uk <br />Largest somatic mutation database; genome sequencing paper curation</p><p>CPRG <br />http://www.broadinstitute.org/software/cprg <br />Interface for cancer program resources</p><p>GDAC <br />http://gdac.broadinstitute.org/ <br />Data analysis; automatic pipelines; user-friendly reports</p><p>SNP500Cancer <br />http://snp500cancer.nci.nih.gov <br />Sequence and genotype verification of SNPs</p><p>canEvolve <br />www.canevolve.org/ <br />Comprehensive analysis of tumor profile; Data from 90 studies involving more than 10,000 patients</p><p>MethyCancer <br />http://methycancer.psych.ac.cn <br />Relationship among DNA methylation, gene expression and cancer</p><p>SomamiR <br />http://compbio.uthsc.edu/SomamiR/ <br />Correlation between somatic mutation and microRNA; genome-wide displaying</p><p>cBioPortal <br />http://www.cbioportal.org/public-portal/ <br />Graphical summaries; gene alteration; processed data; visualization</p><p>UCSC Cancer Genomics Browser <br />https://genome-cancer.soe.ucsc.edu/ <br />Clinical information; gene expression; copy number variation; visualization</p><p>CGWB <br />https://cgwb.nci.nih.gov/ <br />Visualization; gene mutation and variation; automated analysis pipeline</p><p>GDSC <br />http://www.cancerrxgene.org <br />Drug sensitivity information; drug response information</p><p>canSAR <br />https://cansar.icr.ac.uk/ <br />Multidisciplinary information; drug discovery</p><p>NONCODE <br />http://www.noncode.org/ ncRNAs; <br />lncRNAs; up-to-date and comprehensive resource</p>]]></description>
	<dc:creator>biogeek</dc:creator>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/40881/liu-lab</guid>
  <pubDate>Tue, 04 Feb 2020 06:27:02 -0600</pubDate>
  <link></link>
  <title><![CDATA[Liu Lab]]></title>
  <description><![CDATA[
<p>Shirley is a computational biologist with expertise in cancer epigenetics. Her research focuses on algorithm development and integrative mining from big data generated on microarrays, massively parallel sequencing, and other high throughput techniques to model the specificity and function of transcription factors, chromatin regulators and lncRNAs in tumor development, progression, drug response and resistance.</p>

<p>https://liulab-dfci.github.io/software/</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/3917/the-story-of-you-encode-and-the-human-genome</guid>
	<pubDate>Sat, 24 Aug 2013 18:49:03 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/3917/the-story-of-you-encode-and-the-human-genome</link>
	<title><![CDATA[The Story of You: ENCODE and the human genome]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/TwXXgEz9o4w" frameborder="0" allowfullscreen></iframe><p>Ever since a monk called Mendel started breeding pea plants we've been learning about our genomes. In 1953, Watson, Crick and Franklin described the structure of the molecule that makes up our genomes: the DNA double helix. Then, in 2001, scientists wrote down the entire 3-billion letter code contained in the average human genome. Now they're trying to interpret that code; to work out how it's used to make different types of cells and different people. The ENCODE project, as it's called, is the latest chapter in the story of you. To read the ENCODE research papers and more, visit http://www.nature.com/ENCODE</p>]]></description>
	
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4763/inner-life-of-a-cell-full-versionmkv</guid>
	<pubDate>Mon, 23 Sep 2013 18:09:41 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4763/inner-life-of-a-cell-full-versionmkv</link>
	<title><![CDATA[Inner Life Of A Cell - Full Version.mkv]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/yKW4F0Nu-UY" frameborder="0" allowfullscreen></iframe>Работа аппарата Гольджи и ЭПС при дифференцировке лейкоцита]]></description>
	
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/5582/the-human-microbiome-and-what-we-do-to-it</guid>
	<pubDate>Mon, 14 Oct 2013 16:25:10 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/5582/the-human-microbiome-and-what-we-do-to-it</link>
	<title><![CDATA[The human microbiome and what we do to it]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/EEZSuwkx7Ik" frameborder="0" allowfullscreen></iframe><p>Did you know that you and I are only 1% human &mdash; we've 90 trillion cells which don't belong to us. Yes we are more bacteria than human. Have you ever wondered what it means to be human? It turns out that only a tiny percentage of what you and I are made of is actually human &mdash; and we need our non-human bits to survive. This part of us now has a name &mdash; it's called our microbiome. But we're doing dreadful things to this hidden majority and it's damaging our health as a result. From the Tonic series produced with the assistance of NPS. For more information visit: http://www.nps.org.au</p>]]></description>
	
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