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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/5462?offset=660</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4634/immune-response-to-cancer-cells-awesome</guid>
	<pubDate>Fri, 20 Sep 2013 06:20:47 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4634/immune-response-to-cancer-cells-awesome</link>
	<title><![CDATA[Immune response to cancer cells! AWESOME]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/C6YuBh-wAPQ" frameborder="0" allowfullscreen></iframe><p>Awesome viddeo explaining the way in which the antibody, HuLuc 63, appears to induce anti-tumor effects by binding to a protein that is only expressed on the surface of myeloma cells. This initiates antibody-dependent cellular cytotoxicity activity that kills myeloma cells and leaves healthy cells intact.</p>]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/31251/bioinformatics-opening-at-icgeb-new-delhi</guid>
  <pubDate>Thu, 02 Mar 2017 04:16:36 -0600</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics opening at ICGEB NEW DELHI]]></title>
  <description><![CDATA[
<p>ICGEB NEW DELHI</p>

<p>Applications are invited for:</p>

<p>Junior Research Fellow, in a DBT funded project, is available in Translational Health Group, ICGEB, New Delhi</p>

<p>Qualifications:</p>

<p>Education: M.Sc. (preferably in Biotechnology, Life Sciences or Zoology, Chemistry, Bioinformatics). Candidates with hands on experience on GC-MS data acquisition and analysis will be given preference. Bioinformatics expertise required.</p>

<p>Fellowship: As per DBT guidelines.</p>

<p>Tenure: The position is purely on temporary basis with an initial tenure of six months and based on satisfactory performance may continue until the completion of the project.</p>

<p>Closing date for applications: 04/03/2017</p>

<p>Please send a "TWO PAGE" CV by email to:  th.icgeb@gmail.com on or before the last date.</p>

<p>Research Associate, in a DBT funded project, is available in Translational Health Group, ICGEB, New Delhi</p>

<p>Qualifications:</p>

<p>Education: Ph.D. (in Biology, Biotechnology, Chemistry, Bioinformatics). Candidates with hands on experience on GC-MS data acquisition and analysis will be given preference. </p>

<p>Fellowship: As per DBT guidelines.</p>

<p>Tenure: The position is purely on temporary basis with an initial tenure of six months and  based on satisfactory performance may continue until the completion of the project.</p>

<p>Closing date for applications: 04/03/2017</p>

<p>Please send a "TWO PAGE" CV by email to: th.icgeb@gmail.com on or before the last date.</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/5582/the-human-microbiome-and-what-we-do-to-it</guid>
	<pubDate>Mon, 14 Oct 2013 16:25:10 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/5582/the-human-microbiome-and-what-we-do-to-it</link>
	<title><![CDATA[The human microbiome and what we do to it]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/EEZSuwkx7Ik" frameborder="0" allowfullscreen></iframe><p>Did you know that you and I are only 1% human &mdash; we've 90 trillion cells which don't belong to us. Yes we are more bacteria than human. Have you ever wondered what it means to be human? It turns out that only a tiny percentage of what you and I are made of is actually human &mdash; and we need our non-human bits to survive. This part of us now has a name &mdash; it's called our microbiome. But we're doing dreadful things to this hidden majority and it's damaging our health as a result. From the Tonic series produced with the assistance of NPS. For more information visit: http://www.nps.org.au</p>]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/31302/multi-metagenome-assembly</guid>
	<pubDate>Fri, 03 Mar 2017 10:14:18 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/31302/multi-metagenome-assembly</link>
	<title><![CDATA[Multi-metagenome assembly]]></title>
	<description><![CDATA[<p>This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in:</p>
<p>Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes<br><br>Mads Albertsen, Philip Hugenholtz, Adam Skarshewski, Gene W. Tyson, K&aring;re L. Nielsen and Per .H. Nielsen</p>
<p>Nature Biotechnology 2013, doi:&nbsp;<a href="http://www.nature.com/nbt/journal/vaop/ncurrent/abs/nbt.2579.html">10.1038/nbt.2579</a></p><p>Address of the bookmark: <a href="https://github.com/MadsAlbertsen/multi-metagenome" rel="nofollow">https://github.com/MadsAlbertsen/multi-metagenome</a></p>]]></description>
	<dc:creator>Radha Agarkar</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/9298/immunology-in-the-gut-mucosa</guid>
	<pubDate>Mon, 17 Mar 2014 11:10:29 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/9298/immunology-in-the-gut-mucosa</link>
	<title><![CDATA[Immunology in the Gut Mucosa]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/gnZEge78_78" frameborder="0" allowfullscreen></iframe>The gut mucosa hosts the body's largest population of immune cells. Nature Immunology in collaboration with Arkitek Studios have produced an animation unravelling the complexities of mucosal immunology in health and disease.

Nature Immunology homepage: http://www.nature.com/ni/index.html

Nature has full responsibility for all editorial content, including NatureVideo content. This content is editorially independent of sponsors.]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/31353/concoct-clustering-contigs-with-coverage-and-composition</guid>
	<pubDate>Mon, 06 Mar 2017 04:08:16 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/31353/concoct-clustering-contigs-with-coverage-and-composition</link>
	<title><![CDATA[CONCOCT: Clustering cONtigs with COverage and ComposiTion]]></title>
	<description><![CDATA[<p>A program for unsupervised binning of metagenomic contigs by using nucleotide composition, coverage data in multiple samples and linkage data from paired end reads.</p>
<p>Warning! This software is to be considered under development. Functionality and the user interface may still change significantly from one version to another. If you want to use this software, please stay up to date with the list of known issues:<a href="https://github.com/BinPro/CONCOCT/issues">https://github.com/BinPro/CONCOCT/issues</a></p><p>Address of the bookmark: <a href="https://github.com/BinPro/CONCOCT" rel="nofollow">https://github.com/BinPro/CONCOCT</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/fun/view/14036/introduction-to-programming-write-short-programs-that-generate-graphics-and-animation</guid>
	<pubDate>Thu, 14 Aug 2014 23:29:04 -0500</pubDate>
	<link>https://bioinformaticsonline.com/fun/view/14036/introduction-to-programming-write-short-programs-that-generate-graphics-and-animation</link>
	<title><![CDATA[Introduction to programming. Write short programs that generate graphics and animation.]]></title>
	<description><![CDATA[<p>Introduction to programming. Write short programs that generate graphics and animation.</p><p>http://funprogramming.org/</p>]]></description>
	<dc:creator>Ram Yash Pal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/31382/seqmule-automated-human-exomegenome-variants-detection</guid>
	<pubDate>Tue, 07 Mar 2017 10:12:36 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/31382/seqmule-automated-human-exomegenome-variants-detection</link>
	<title><![CDATA[SeqMule: Automated human exome/genome variants detection]]></title>
	<description><![CDATA[<p><span>SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script line by line. Users can change the pipeline or fine-tune the parameters by modifying its configuration file. SeqMule also has some built-in functions, such as pooling consensus calls from various callers, plotting a Venn diagram showing intersection among different callers, and downloading databases. SeqMule can be used for both Mendelian disease study and cancer genome study.</span></p><p>Address of the bookmark: <a href="http://seqmule.openbioinformatics.org/en/latest/" rel="nofollow">http://seqmule.openbioinformatics.org/en/latest/</a></p>]]></description>
	<dc:creator>Abhimanyu Singh</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/view/138</guid>
	<pubDate>Wed, 10 Jul 2013 16:30:58 -0500</pubDate>
	<link>https://bioinformaticsonline.com/view/138</link>
	<title><![CDATA[Selecting between Python 2 and Python 3?]]></title>
	<description><![CDATA[<p>Which version is best for bioinformatician to work on?</p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/31564/htslib</guid>
	<pubDate>Wed, 15 Mar 2017 11:38:05 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/31564/htslib</link>
	<title><![CDATA[HTSlib]]></title>
	<description><![CDATA[<p>Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three separate repositories:</p>
<dl><dt>Samtools</dt><dd>Reading/writing/editing/indexing/viewing SAM/BAM/CRAM format</dd><dt>BCFtools</dt><dd>Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants</dd><dt>HTSlib</dt><dd>A C library for reading/writing high-throughput sequencing data</dd></dl>
<p>Samtools and BCFtools both use HTSlib internally, but these source packages contain their own copies of htslib so they can be built independently.</p><p>Address of the bookmark: <a href="http://www.htslib.org/" rel="nofollow">http://www.htslib.org/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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